New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4602757 =92 (1.130)5 (0.070) 4/164 NT 6.0% coding (102/771 nt) yjjP DUF1212 family inner membrane protein
?NC_000913 4602785 = 71 (0.950)coding (74/771 nt) yjjP DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 108 total aligned reads displayed.

GTCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGTGCT  >  NC_000913/4602686‑4602884
                                                                                                   |                                                                                                   
 tCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGc                                                                                                    >  2:63373/1‑100 (MQ=255)
 tCAGCACTATGGCGTTCGAAGAGATAGAACTGGCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATTAACCAACGCGCTTTCCg                                                                                                     <  2:268391/99‑1 (MQ=255)
 aaactgaggaacagcgcgccgtaacactgctttgtatccagtgtggattatatcttttgcaacctggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGc                                                                                                    >  1:1409857‑M1/71‑100 (MQ=255)
 aaactgagcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGc                                                                                                    >  1:2080697‑M1/71‑100 (MQ=255)
  aactgagcaacagcgagccgtatcacggcttcgtatctagtgtggatcatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGCa                                                                                                   >  2:1512692‑M1/70‑100 (MQ=255)
    gCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCAcc                                                                                                 >  1:370039/1‑100 (MQ=255)
    gCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCAcc                                                                                                 >  1:409835/1‑100 (MQ=255)
    gCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCAcc                                                                                                 >  1:371425/1‑100 (MQ=255)
    gCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCAcc                                                                                                 <  2:519625/100‑1 (MQ=255)
     tgagcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGCACCa                                                                                                >  1:131710‑M1/67‑100 (MQ=255)
        gcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTGTCCGCACCATGt                                                                                             >  1:1477268‑M1/64‑100 (MQ=255)
         aTGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGtt                                                                                            <  1:2160902/100‑1 (MQ=255)
          tGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTg                                                                                           <  1:1834317/100‑1 (MQ=255)
           ggCGTTCGAGGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGc                                                                                          <  1:1804301/100‑1 (MQ=255)
           ggCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGc                                                                                          <  2:299804/100‑1 (MQ=255)
            gCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCa                                                                                         <  2:438257/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    <  1:2249047/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    <  2:2148995/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    >  1:227324/1‑100 (MQ=255)
                  gAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGaa                                                                                   >  1:1146827/1‑100 (MQ=255)
                       gaTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAaataat                                                                              >  1:637399/1‑100 (MQ=255)
                       gaTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAaataat                                                                              >  1:361545/1‑100 (MQ=255)
                       gaTAGAACTTTCGACGCAGTCCATTCCCAGTGCCCGAACCAGTCGTGAGGAAAGCTCATCAACCAACGAGCTTTCCGCACCATGTTGCAAAAGAaatact                                                                              >  2:51705/1‑98 (MQ=255)
                        aTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAaataat                                                                              <  2:688376/99‑1 (MQ=255)
                         tAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATcc                                                                            <  2:383915/100‑1 (MQ=255)
                           gAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCcac                                                                          >  1:1041618/1‑100 (MQ=255)
                              cTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGGACCATGTTGCAAAAGAAATAATCCACACt                                                                       <  2:673682/100‑1 (MQ=255)
                              cTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACt                                                                       >  2:324935/1‑100 (MQ=255)
                               tttCGACGCTGTCCATTCCCCGTTCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCacacg                                                                       <  2:706724/99‑2 (MQ=255)
                               tttCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTg                                                                      <  2:3987/100‑1 (MQ=255)
                               tttCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTg                                                                      <  1:1188818/100‑1 (MQ=255)
                                ttCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTgg                                                                     <  2:1615962/100‑1 (MQ=255)
                                ttCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTgg                                                                     <  1:152294/100‑1 (MQ=255)
                                  cGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGAt                                                                   >  1:514770/1‑100 (MQ=255)
                                   gACGCTGCCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATa                                                                  >  2:739403/1‑100 (MQ=255)
                                     cGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACa                                                                <  1:842834/100‑1 (MQ=255)
                                        tttCCATTCCTAGTGCCCTACCCCGTCGTGAGGATTGCTCATCAATCAACGCGCTTTCCGCACCATGTTGTAAATGTTATTATCCACACTGGAGACaaa                                                              <  2:951335/97‑1 (MQ=255)
                                        tGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAg                                                             >  1:2095824/1‑100 (MQ=255)
                                         gTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGc                                                            >  1:504968/1‑100 (MQ=255)
                                          tCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGcc                                                           <  2:1634182/100‑1 (MQ=255)
                                           ccATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCg                                                          >  1:1555659/1‑100 (MQ=255)
                                           ccATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCg                                                          >  1:594856/1‑100 (MQ=255)
                                           ccATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCg                                                          >  2:1006476/1‑100 (MQ=255)
                                            taTTCCCAGTGCCCGACCCAGTAGTGAGGAAAGGTAATGAACCAAGGCGCTTTCCGCACTATGTGGCAAAGGAAATAATCAAAAGTGGATACAAAggggt                                                         >  2:1775558/2‑96 (MQ=255)
                                            cATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGcc                                                           <  2:1568116/98‑1 (MQ=255)
                                            cATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgt                                                         >  1:2077980/1‑100 (MQ=255)
                                             aTTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtg                                                        <  1:95380/100‑1 (MQ=255)
                                              ttCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtgn                                                       <  2:702736/100‑2 (MQ=255)
                                               tCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGtt                                                      <  1:40581/100‑1 (MQ=255)
                                                cccAGTGCCCGACCTAGTCTAAAGGAAAGCTAATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtgtga                                                     >  2:1362186/1‑98 (MQ=255)
                                                cccAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTa                                                     <  1:1006478/100‑1 (MQ=255)
                                                    gTGCCCGACCCAGTCGCGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGc                                                 <  2:1308734/100‑1 (MQ=255)
                                                      gCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTc                                               >  1:60629/1‑100 (MQ=255)
                                                      gCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTc                                               >  1:1187593/1‑100 (MQ=255)
                                                      gCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTc                                               >  2:762079/1‑100 (MQ=255)
                                                        ccGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGc                                                 >  1:1740096/1‑96 (MQ=255)
                                                        ccGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGc                                             >  2:744756/1‑100 (MQ=255)
                                                        ccGACCCAGTCGTGAGGAAAGCTCATAAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCt                                                <  2:80951/97‑1 (MQ=255)
                                                          gACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTg                                           <  2:2155112/100‑1 (MQ=255)
                                                           aCCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGt                                          >  2:106028/1‑100 (MQ=255)
                                                            cccAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGtt                                         >  1:307498/1‑100 (MQ=255)
                                                              cggTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGc                                       >  1:1514733/3‑100 (MQ=255)
                                                              cAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGc                                       <  1:1112447/100‑1 (MQ=255)
                                                              acatggtgcggacagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGc                                       >  1:1477268‑M2/38‑100 (MQ=255)
                                                                gTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTc                                     <  2:326838/100‑1 (MQ=255)
                                                                gTCGGGAGGAAAGCTCATCAACCAACGCACTGTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTc                                     <  1:518749/100‑1 (MQ=255)
                                                                 tggtgcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCa                                    >  1:131710‑M2/35‑100 (MQ=255)
                                                                 tcatgacGAAAGCTCATCAACCAACGCGCTTTCCGCAACATGTTTCAAAAGAAATCATCCACACTTGATACAAACCCGTGTTACGGCTCGCTGTTGc                                       >  2:1336668‑M1/8‑97 (MQ=255)
                                                                    tgcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATGATCCACACTAGATACGAAGCCGTGATACGGCTCGCTGTTGCTCAGtt                                 >  2:1512692‑M2/32‑100 (MQ=255)
                                                                    tGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGtt                                 >  2:1705443/1‑100 (MQ=255)
                                                                     gcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGttt                                >  1:2080697‑M2/31‑100 (MQ=255)
                                                                     gAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGttt                                >  1:1605149/1‑100 (MQ=255)
                                                                     gAGGAAAGCTCATCAACCAACGAGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAggt                                 >  2:396348/1‑97 (MQ=255)
                                                                      aGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATACTCCACACTGGATACAAAGCCGTGTTACGTCTCGCTGTTGCTCAGttt                                <  2:1624534/99‑1 (MQ=255)
                                                                      aGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTg                               <  1:1348695/100‑1 (MQ=255)
                                                                      aGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTg                               <  1:1368433/100‑1 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              >  2:1426735‑M1/1‑100 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              <  1:1549581‑M1/100‑1 (MQ=255)
                                                                        GAAAGCTCATAAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             >  2:1470323‑M1/1‑100 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             >  1:2065763‑M1/1‑99 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCAt                            <  1:2184691‑M1/100‑1 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCAt                            >  1:744756‑M1/1‑100 (MQ=255)
                                                                            GCTCATCAACCAACGCGCTTTCCGCACAATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATaa                          <  2:115846‑M1/99‑1 (MQ=255)
                                                                              tcatcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTc                       >  1:1241306/1‑100 (MQ=255)
                                                                               catcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCg                      >  1:456143/1‑100 (MQ=255)
                                                                               catcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCg                      >  1:208403/1‑100 (MQ=255)
                                                                               catcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCACGCTGTTGCTCAGTTTGCATAACTCg                      >  2:1900187/1‑100 (MQ=255)
                                                                                   aacccacGCGATTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTGTGCATAACTCGCCCt                  >  2:1303712/1‑100 (MQ=255)
                                                                                     ccaacGCGCTTTCCGAACCATGTTGCAAAAGAAATAATTCACACTGGATACAAAGCCGTGTTACGGCTCGATGTTGCTAAGTTTGCATAACTCGCCAtt                 >  2:2069718/1‑99 (MQ=255)
                                                                                      caacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTg               <  2:1201341/100‑1 (MQ=255)
                                                                                       aacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGTCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGt              >  1:25825/1‑100 (MQ=255)
                                                                                       aacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGt              <  2:456144/100‑1 (MQ=255)
                                                                                          gcgcTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCAt           <  2:1173818/100‑1 (MQ=255)
                                                                                           cgcTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATa          <  2:2185274/100‑1 (MQ=255)
                                                                                           cgcTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATa          <  2:1146823/100‑1 (MQ=255)
                                                                                            gctatccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAg         <  1:2103640‑M2/93‑1 (MQ=255)
                                                                                              tttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGAc       <  1:263476‑M2/95‑1 (MQ=255)
                                                                                                tccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGt     >  1:1926799‑M2/4‑100 (MQ=255)
                                                                                                tccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGt     >  1:938953‑M2/4‑100 (MQ=255)
                                                                                                   gCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGtgct  >  1:1096480/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGTGCT  >  NC_000913/4602686‑4602884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.