New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3139655 =NA (NA)9 (0.120) 5/164 NT NA noncoding (35/83 nt) REP221 (repetitive extragenic palindromic) element; contains 2 REP sequences REP221 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4218440 = NA (NA)noncoding (5/132 nt) REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 105 total aligned reads displayed.

ATTTCGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGC  >  NC_000913/3139556‑3139754
                                                                                                   |                                                                                                    
aTTTCGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                                      >  1:1926001/1‑100 (MQ=255)
  ttCGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                                                    <  2:2196798/100‑1 (MQ=255)
    cGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCg                                                                                                  >  2:1352773/1‑100 (MQ=255)
    cGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCg                                                                                                  <  1:1565671/100‑1 (MQ=255)
    cGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCg                                                                                                  <  1:641157/100‑1 (MQ=255)
      agaCGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTg                                                                                                <  1:647868/100‑1 (MQ=255)
      agaCGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTg                                                                                                <  1:1216036/100‑1 (MQ=255)
       gaCGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGc                                                                                               <  1:89158/100‑1 (MQ=255)
       gaCGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGc                                                                                               <  2:2227115/100‑1 (MQ=255)
         cGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGcac                                                                                             >  2:40007/1‑100 (MQ=255)
         cGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGcac                                                                                             <  1:506583/100‑1 (MQ=255)
         cGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGcac                                                                                             >  1:2098235/1‑100 (MQ=255)
          gAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCTCGCCGCATCCGGCAATCGTGcac                                                                                             <  2:208135/99‑1 (MQ=255)
           aaTACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACaa                                                                                           >  2:2166260/1‑100 (MQ=255)
           aaTACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACaa                                                                                           >  2:260303/1‑100 (MQ=255)
             naCGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATg                                                                                         >  1:1623031/2‑100 (MQ=255)
              aCGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGc                                                                                        >  1:1258557/1‑100 (MQ=255)
               cGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGcc                                                                                       >  2:942430/1‑100 (MQ=255)
               cGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGcc                                                                                       >  1:2169061/1‑100 (MQ=255)
               cGGAAGATAAGCGTCAGGGGTAAGGGTCGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGc                                                                                        >  1:747055/1‑99 (MQ=255)
                  aaGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTgn                                                                                    <  2:1997197/100‑2 (MQ=255)
                    gATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCTTGATg                                                                                  <  2:341427/100‑1 (MQ=255)
                    gATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATg                                                                                  <  2:231614/100‑1 (MQ=255)
                    gATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGCTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATg                                                                                  >  2:1515462/1‑100 (MQ=255)
                      tAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCg                                                                                >  2:1430402/1‑100 (MQ=255)
                       aaGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGa                                                                               >  1:2046813/1‑100 (MQ=255)
                       aaGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGa                                                                               <  2:77287/100‑1 (MQ=255)
                           gTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCt                                                                           >  1:2065838/1‑100 (MQ=255)
                            tCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑g                                                                         <  1:1913602/100‑1 (MQ=255)
                             cAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATACAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑Gc                                                                        >  2:2157372/1‑100 (MQ=255)
                               ggggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑Gcc                                                                       >  1:604082/1‑99 (MQ=255)
                               ggggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCcg                                                                      >  1:981731/1‑100 (MQ=255)
                               ggggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCcg                                                                      <  1:2059886/100‑1 (MQ=255)
                                gggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCcgc                                                                     >  1:1414431/1‑100 (MQ=255)
                                 ggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCcgcg                                                                    <  1:132120/100‑1 (MQ=255)
                                 ggTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCcgcg                                                                    >  1:523045/1‑100 (MQ=255)
                                  gTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGCTTTATGCGTTCACGCCGCCTCCGGCAATCGTGCACAACGCCTGACGCTCCGCt‑gctgca                                                                    <  2:2204877/99‑2 (MQ=255)
                                   tAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTc                                                                  <  2:2108144/100‑1 (MQ=255)
                                   tAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTc                                                                  <  1:1940585/100‑1 (MQ=255)
                                      gggTTGGTGTTCGTCGCAGTAAGCCAGCCAGGATGGATAAGGCGTTCACGCCGCATCCGGCAAGCGTGCACAATGCTTGATGCGACGCT‑GCCGCGTCt                                                                 <  2:566077/98‑1 (MQ=21)
                                      gggTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTa                                                               >  1:2173736/1‑100 (MQ=255)
                                       ggTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTAt                                                              >  2:1442968/1‑100 (MQ=255)
                                       ggTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGACTTAt                                                              >  1:893299/1‑100 (MQ=255)
                                        gTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATc                                                             >  2:162475/1‑100 (MQ=255)
                                        gTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATc                                                             >  1:1890893/1‑100 (MQ=255)
                                        gTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATc                                                             <  2:1949061/100‑1 (MQ=255)
                                           ggTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAgg                                                          <  1:162475/100‑1 (MQ=255)
                                           ggTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAgg                                                          >  1:1357604/1‑100 (MQ=255)
                                           ggTGTTCGTCGCAGCAAGCAATCCAAGCCGGATAATGCGTTCACGCCGCAGCCGTCAATCGTGCACAATGCCTGATAAGACGCG‑GCAGCGTCGCATCAgg                                                          <  2:990176/100‑1 (MQ=21)
                                            gtgtTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGc                                                         <  1:887159/100‑1 (MQ=255)
                                             tgtTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGcc                                                        >  2:1671254/1‑100 (MQ=255)
                                             tgtTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGcc                                                        <  1:551846/100‑1 (MQ=255)
                                                 cgtcgCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACg                                                    >  2:508710/1‑100 (MQ=255)
                                                 cgtcgCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACg                                                    >  2:2176033/1‑100 (MQ=255)
                                                   tcgCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGaa                                                  >  2:1720290/1‑100 (MQ=255)
                                                    cgCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGaaa                                                 >  1:884531/1‑100 (MQ=255)
                                                     gcagcaAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAg                                                >  1:1664193/1‑100 (MQ=255)
                                                      cagcaAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGc                                               >  2:1237807/1‑100 (MQ=255)
                                                      cagcaAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGc                                               <  1:1964654/100‑1 (MQ=255)
                                                      cagcaAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACACT‑GCCGCGTCTTATCAGGCCTACGAAAGc                                               <  2:1168559/100‑1 (MQ=255)
                                                        gcaAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCt                                              <  1:1710505/99‑1 (MQ=255)
                                                              cATCCAGGCCGGATAAGTCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAatcatc                                       >  1:1835613/1‑100 (MQ=255)
                                                              cATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAatcatc                                       >  1:1090765/1‑100 (MQ=255)
                                                               aTCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAAtcatca                                      <  1:2058059/100‑1 (MQ=255)
                                                               aTCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAAtcatca                                      <  1:1336323/100‑1 (MQ=255)
                                                               aTCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAAtcatca                                      <  1:761246/100‑1 (MQ=255)
                                                                tCCAGGCGGGATACGCCGGTCACGGCGCATCCGGCAATCGTGCACACTGCCGGATGAGACGCT‑GCAGCGTCTTATCAGGCCTACGAATGATAAtcatca                                      <  2:1910346/99‑1 (MQ=18)
                                                                tCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCGTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTa                                             >  2:1247649/1‑92 (MQ=255)
                                                                 gattgccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCAcg                                    <  1:2231706‑M1/66‑1 (MQ=255)
                                                                  attgccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCAcgc                                   <  2:616208‑M1/67‑1 (MQ=255)
                                                                  attgccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCAcgc                                   <  1:438563‑M1/67‑1 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTTACGCCGCATCAGGCATCTGAGCATGATGCCTGATGCGGCGCTGGTCGCGTCTTATCAGGCCTACAAAAGcaatagtttc                                      >  2:2108047/1‑88 (MQ=18)
                                                                   aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCAcgcg                                  >  2:1728635/1‑100 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCAcgcg                                  <  2:728380/100‑1 (MQ=255)
                                                                    tgccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACgcgc                                 <  1:1382910‑M1/69‑1 (MQ=255)
                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACgcgc                                 >  1:1403227/1‑100 (MQ=255)
                                                                     gccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCt                                <  1:640653‑M1/70‑1 (MQ=255)
                                                                     gccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCAACAcg                                    <  1:603850‑M1/66‑1 (MQ=255)
                                                                     gccggatgcggcgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCCTATCAGGCCTCCGAAAGCTAATCATCACgcgc                                 <  2:1674659‑M1/69‑1 (MQ=255)
                                                                     gCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCt                                <  1:1414950/100‑1 (MQ=255)
                                                                       cGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTgg                              <  1:610740/100‑1 (MQ=255)
                                                                        ggATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGt                             <  1:508709/100‑1 (MQ=255)
                                                                             aGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATg                         >  2:83146/1‑99 (MQ=255)
                                                                             aGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGt                        <  1:1252468/100‑1 (MQ=255)
                                                                               gCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCg                      <  1:1671265/100‑1 (MQ=255)
                                                                                cgtgaacgccttatccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGt                     >  2:438564‑M1/20‑100 (MQ=255)
                                                                                 gTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGt                     <  1:835731/99‑1 (MQ=255)
                                                                                         cgcATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCAttt            <  1:1746909/100‑1 (MQ=255)
                                                                                          gcATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTg           >  2:720638/1‑100 (MQ=255)
                                                                                            atccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGgc         >  1:1377564‑M1/8‑100 (MQ=255)
                                                                                            atccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCAACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGgc         >  2:901224‑M1/8‑100 (MQ=255)
                                                                                             tccggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCATACGAAAGATAATAATCAAGCGCTGGTAATGTCGTAATCCATTTGgcg        <  2:1868265‑M1/94‑1 (MQ=255)
                                                                                               cggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGAGCa      <  2:166739‑M1/96‑1 (MQ=255)
                                                                                               cggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATAATCACGCGCTGGTAATGTCGTAATCCATttgcc         <  2:2180305‑M1/93‑3 (MQ=255)
                                                                                                ggcAATCGTGTACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAg     <  1:874174‑M1/97‑1 (MQ=255)
                                                                                                ggcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAg     <  2:1548898‑M1/97‑1 (MQ=255)
                                                                                                 gcAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGt    >  1:1074591‑M1/3‑100 (MQ=255)
                                                                                                  cAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTACTGTCGTAATCCATTTGACGCAGt    <  1:846031‑M1/98‑1 (MQ=255)
                                                                                                  cAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTg   <  1:379328‑M1/99‑1 (MQ=255)
                                                                                                  cAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTg   >  2:1857069‑M1/2‑100 (MQ=255)
                                                                                                   |                                                                                                    
ATTTCGAGACGAATACGGAAGATAAGCGTCAGGGGTAAGGGTTGGTGTTCGTCGCAGCAAGCCATCCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGTGCACAATGCCTGATGCGACGCT‑GCCGCGTCTTATCAGGCCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGC  >  NC_000913/3139556‑3139754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.