New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620116NA (NA)7 (0.090) 3/166 NT 100% coding (925/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620152 0 (0.000)coding (961/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAAT  >  NC_000913/3620049‑3620215
                                                                   |                                                                                                   
cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCTGAGAATTTACCTGCCGCGCAGCTCGTGCGCTATTGCTGTACGACACGC                                                                     <  2:289268‑M2/100‑1 (MQ=255)
cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                     >  1:859063‑M2/1‑100 (MQ=255)
cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                     <  1:371095‑M2/100‑1 (MQ=255)
 aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                    >  2:1238834‑M2/1‑100 (MQ=255)
 aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                    >  1:932893‑M2/1‑100 (MQ=255)
  aCGGCCTCCGTCGGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCGGCCGGGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   >  2:673114‑M2/1‑100 (MQ=255)
  aCGGCATCCGTCTGTCTGCTGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   <  2:929641‑M2/100‑1 (MQ=255)
  aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGTCGCCACGCGG                                                                   <  1:1558444‑M2/100‑1 (MQ=255)
  aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   <  1:2245847‑M2/100‑1 (MQ=255)
  aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   <  2:1877370‑M2/100‑1 (MQ=255)
  aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   <  2:541643‑M2/100‑1 (MQ=255)
  aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                   <  1:1003044‑M2/100‑1 (MQ=255)
   cGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGC                                                                  >  1:1932396‑M2/1‑100 (MQ=255)
                                                             ccTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagac        <  1:1029508‑M2/100‑58 (MQ=255)
                                                             ccTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCC‑‑‑‑CGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggat    <  1:1963668‑M2/99‑62 (MQ=255)
                                                               tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg      <  1:899456‑M2/100‑60 (MQ=255)
                                                                gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga     <  1:2143459‑M2/100‑61 (MQ=255)
                                                                gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga     <  1:817899‑M2/100‑61 (MQ=255)
                                                                   gcgccgcTGGTGCGCTATGTCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc  <  2:1531352‑M2/100‑64 (MQ=255)
                                                                   gcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc  <  1:1554619‑M2/100‑64 (MQ=255)
                                                                   |                                                                                                   
CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAAT  >  NC_000913/3620049‑3620215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.