New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3620116 | NA (NA) | 7 (0.090) | 3/166 | NT | 100% | coding (925/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | = 3620152 | 0 (0.000) | coding (961/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC > NC_000913/3620110‑3620251 | ccTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagac < 1:1029508‑M2/100‑58 (MQ=255) ccTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCC‑C‑‑‑‑CGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggat < 1:1963668‑M2/99‑62 (MQ=255) tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgg < 1:899456‑M2/100‑60 (MQ=255) gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga < 1:2143459‑M2/100‑61 (MQ=255) gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga < 1:817899‑M2/100‑61 (MQ=255) gcgccgcTGGTGCGCTATGTCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc < 2:1531352‑M2/100‑64 (MQ=255) gcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgc < 1:1554619‑M2/100‑64 (MQ=255) gcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccgg < 2:870164‑M2/100‑95 (MQ=255) cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc < 2:74032‑M2/100‑96 (MQ=255) cggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggc < 2:542733‑M2/100‑96 (MQ=255) ggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcacccacacggcaaacagacggatgccgttgtcccggccatattcggtgtaacccggc < 2:1522332‑M2/99‑96 (MQ=255) gcgcggcaggtaaattctcggggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag > 1:1812978‑M2/1‑3 (MQ=255) gcgcggcaggtaaattctccgggtattccgggtcgtgtgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag > 1:373383‑M2/1‑3 (MQ=255) gcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcag > 2:604589‑M2/1‑3 (MQ=255) cgcggcagttaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagg > 1:1092980‑M2/1‑2 (MQ=255) gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg > 2:1316994‑M2/1‑1 (MQ=255) gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg > 1:335238‑M2/1‑1 (MQ=255) gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg > 1:1663907‑M2/1‑1 (MQ=255) gcggcaggtaaattctccgggtattccgggtcgtgcgtcagccaaacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg > 1:527829‑M2/1‑1 (MQ=255) gcggcaggtaaattctccgggtattccgggtcgggcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcaggg > 1:350413‑M2/1‑1 (MQ=255) | CCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC > NC_000913/3620110‑3620251 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |