| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 732470 = | 48 (0.590) | 10 (0.130) | 5/168 | NT | 19.4% | coding (2888/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 732512 = | 38 (0.490) | coding (2930/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
CCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCC > NC_000913/732372‑732569 | ttcacgccgccatacccgttttgccaccctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGc > 2:1711857‑M1/99‑100 (MQ=255) tcacgccgccatacccgttttgccaccctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGca > 2:798538‑M1/98‑100 (MQ=255) tcacgccgccatacccgttttgccaccctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGca > 1:547211‑M1/98‑100 (MQ=255) cGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGca > 2:1106093/1‑100 (MQ=31) tGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacc < 1:46894/100‑1 (MQ=33) tGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacc < 2:2120945/100‑1 (MQ=33) tGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacc < 2:1260192/100‑1 (MQ=33) acgccgccatacccgttttgccaccctgcggcccagggggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGcac > 1:2148596‑M1/96‑99 (MQ=255) acgccgccatacccgttttgccaccctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGcacc > 2:931046‑M1/96‑100 (MQ=255) cgccgccatacccgttttgccaccctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGcacc > 2:848797‑M1/95‑99 (MQ=255) cgcgCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacccac > 1:1525100/1‑100 (MQ=33) gcgcACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacccacc < 1:2245513/100‑1 (MQ=33) gcgcACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGcacccacc < 2:510329/100‑1 (MQ=32) gcACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCAGCACGGATGATGAGCGCACCCACCgg > 1:116111/1‑100 (MQ=17) cACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGt < 2:1096684/100‑1 (MQ=32) aCTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTa < 2:21662/100‑1 (MQ=32) cTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTAc < 1:1640039/100‑1 (MQ=32) aTCTTTACCGGTATTGCCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCa < 2:1285949/100‑1 (MQ=12) aTCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCa < 2:1601652/100‑1 (MQ=33) tttACCGGTATGACCGTCACGGCAGGGTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCAtt < 2:1119176/99‑1 (MQ=17) tttACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTa > 1:1217185/1‑100 (MQ=33) tttACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTa < 2:516413/100‑1 (MQ=33) tttACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTa < 1:1783226/100‑1 (MQ=32) tACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACg > 1:1628976/1‑100 (MQ=33) aCCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGa < 2:1618158/100‑1 (MQ=33) ccGGTATGACCGTCACGGCAGCATGACAGAGAAGACCGACCTCATCCCGGCAGGGGTTATCCGCCCGGACGATGCCCGCGCCCACCGGTACCATTACCAc > 2:1480529/1‑100 (MQ=11) ggTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGCCAg > 2:1522307/1‑100 (MQ=17) tATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTc < 2:2176816/100‑1 (MQ=32) aTGACCGTCACTGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCa < 1:898966/100‑1 (MQ=17) aTGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAACGGGTTACCCGCACGGATGATGAGCGCACCCACCGGTACCCTTACGACAGTCa > 2:149374/1‑100 (MQ=255) tGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAg < 1:1435605/100‑1 (MQ=33) tGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAg < 2:10299/100‑1 (MQ=32) ngACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAg > 1:1344481/2‑100 (MQ=18) ctgcggcccagcgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCAGCCGGTACCATTACGACAGTCAGc > 2:740817‑M1/71‑100 (MQ=255) ccGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCAc > 2:699254/1‑100 (MQ=33) ccGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCAc > 1:1932069/1‑100 (MQ=33) cGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCAc > 1:718553/1‑99 (MQ=33) gTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCg > 2:2133146/1‑100 (MQ=32) cACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATTCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGc > 2:1613281/1‑100 (MQ=18) aCGGCAGGCTGACAGAGAAAACCGACCCCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGc > 2:783340/1‑99 (MQ=18) ggCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTgg < 1:549186/100‑1 (MQ=33) cgggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTg > 2:379085‑M1/60‑100 (MQ=255) cAGGCTGACAGAGAAAACCAACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCTCCGGTACTATTACGACAGTCAGCACCGGCt < 2:420976/96‑1 (MQ=255) gggtcgtaaagatagcggctttcgaccagcggctctgcatattgtatccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc > 2:1957447‑M1/59‑100 (MQ=255) aGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc < 2:341909/100‑1 (MQ=33) aGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc < 2:830362/100‑1 (MQ=33) ggtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCa > 1:1388562‑M1/58‑100 (MQ=255) gtcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc > 1:2136397‑M1/57‑100 (MQ=255) gtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc > 1:543203‑M1/57‑100 (MQ=255) gtcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc > 2:1958528‑M1/57‑100 (MQ=255) ggcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc > 2:1803547‑M1/57‑98 (MQ=255) gCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc < 1:214991/100‑1 (MQ=32) gCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc < 1:2095534/100‑1 (MQ=32) tcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt > 1:381337‑M1/56‑100 (MQ=255) cTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt < 1:856386/100‑1 (MQ=33) tGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTa > 2:191774/1‑100 (MQ=32) aCAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTa > 2:593995/1‑98 (MQ=32) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac > 2:1165465/1‑100 (MQ=31) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac > 1:1040861/1‑100 (MQ=31) agagAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTaca > 1:145651/1‑98 (MQ=11) agatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagcGCACCCACCGGTACCATAACGACAGTCAGCACCGGCTGGTGCACTACAcg > 2:77013‑M1/50‑99 (MQ=255) ccGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGt > 1:2160151/1‑100 (MQ=11) ccGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGt > 1:308178/1‑100 (MQ=11) cACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGc > 2:599961/1‑100 (MQ=32) cACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGc < 1:2227530/100‑1 (MQ=32) gatgatGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATc < 1:850990/100‑1 (MQ=32) gatgatGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATc > 1:1125178/1‑100 (MQ=32) atgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTa < 1:1821577/100‑1 (MQ=33) tgaGCGCACCCACCGGTACCATTACGACCGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTAc < 1:2133160/100‑1 (MQ=17) tgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTAc > 1:654227/1‑100 (MQ=33) cgcACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAc < 2:202289/99‑1 (MQ=32) GCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAccc > 2:702599‑M1/1‑100 (MQ=255) | CCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCC > NC_000913/732372‑732569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |