New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1190585NA (NA)4 (0.050) 3/166 NT NA noncoding (6/23 nt) REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 1190596 NA (NA)noncoding (17/23 nt) REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 106 total aligned reads displayed.

CGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCG  >  NC_000913/1190488‑1190684
                                                                                                 |                                                                                                   
cgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACa                                                                                                   <  1:2022819/100‑1 (MQ=255)
cgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACa                                                                                                   >  2:851671/1‑100 (MQ=255)
 gATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAg                                                                                                  <  1:2228295/100‑1 (MQ=255)
 gATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAAAGGAGTTAAAGTGAAAAAATAAAAAGCGTATAATCTTAATAAGCAGGCCGGACAg                                                                                                  <  2:2088867/100‑1 (MQ=255)
   ttATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCa                                                                                                <  1:1894777/100‑1 (MQ=255)
   ttATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCa                                                                                                <  1:1190722/100‑1 (MQ=255)
   ttATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCa                                                                                                >  1:1277844/1‑100 (MQ=255)
      tgtgGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCg                                                                                             >  2:651982/1‑100 (MQ=255)
      tgtgGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCg                                                                                             >  1:1487801/1‑100 (MQ=255)
        tgGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGAGGAGGTAAAGTGAAAAAAAAAAAAGCGGATAAACTTAAGAAGCAGGCCAGACAGCATAGcc                                                                                           >  2:282852/1‑100 (MQ=255)
         ggTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCa                                                                                          >  2:619910/1‑100 (MQ=255)
          gTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCa                                                                                          >  2:1016651/1‑99 (MQ=255)
            tATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtcc                                                                                       <  2:1565904‑M2/100‑4 (MQ=255)
             aTGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtc                                                                                        >  2:831088‑M2/1‑96 (MQ=255)
                ggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCa                                                                                   <  2:204734/100‑1 (MQ=255)
                  gtgaaccattaaaTAAACCAGCGGGTAGGGGAGGTAAAGTGAAAAAATAAAAAGCGTATAATCTTAATAAGCATGCTGTAtggcgatgctgtccggcctg                                                                                 <  2:196486‑M1/94‑21 (MQ=255)
                   gTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGAtggcgatgctgtccggcctgc                                                                                <  1:1793841‑M1/100‑22 (MQ=255)
                   gTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTg                                                                                >  2:916376/1‑100 (MQ=255)
                    tataattaaaataaaCTAGCAGGAAGGGGAGGTAAAATGAAAAAATAAAAAGCGGATAATCTTAATAAGCAAGCCGGACATCATCGCCATCAGGCACTGa                                                                               <  2:519948/92‑1 (MQ=255)
                    tAAACATTAAATAAACTAGCGGGGAGGTGAAGTAAAGTGAAAAAATAAAAATCGCATAATCTTAATAAGCTGGCCGGTTAGCATCGCCATCCGGCACTGa                                                                               <  2:904482/100‑1 (MQ=255)
                    tAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc                                                                                  <  1:651982/97‑1 (MQ=255)
                    tAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTg                                                                                <  1:103912/99‑1 (MQ=255)
                      aaCATTAAATAAACCAGCGGGGAGGGGATGTAAAGTGAAAAAAGAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa                                                                             <  2:191584/100‑1 (MQ=255)
                       aCATTAAATAAACCAGCGGGGAGGGGAAGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGAtggcgatgctgtccggcctgcttat                                                                            <  1:1186674‑M1/100‑26 (MQ=255)
                        cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTAAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATACGGCACTGATACg                                                                           >  2:454821/1‑100 (MQ=255)
                         aTTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAAGCCGGACAGCATCGCCATCCAGCACTGATACGa                                                                          >  1:1773745/1‑100 (MQ=255)
                           taaataaaCCAGCGGGGAGGGGAGGTAGAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg                                                                        <  1:1565915/100‑1 (MQ=255)
                           taaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg                                                                        <  1:2151345/100‑1 (MQ=255)
                            aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGTTATCCGGCACTGATACGAgg                                                                        <  2:1400706/99‑1 (MQ=255)
                            aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGt                                                                       >  2:249806/1‑100 (MQ=255)
                             aataaaCCAGCGGGGAGGGGAGATAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg                                                                        <  2:626707/98‑1 (MQ=255)
                                   ncAGCGGGGAGGGTAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                >  2:1386981/2‑100 (MQ=255)
                                   ccAGGGGGGAGGGGGGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGAtggcgatgctgtccggcctgcttattaagattatccg                                                                <  1:523325‑M1/100‑38 (MQ=255)
                                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                >  1:1995168/1‑100 (MQ=255)
                                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                >  1:2006010/1‑100 (MQ=255)
                                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                <  1:1727439/100‑1 (MQ=255)
                                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                >  2:679550/1‑100 (MQ=255)
                                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGACGGACAGCATCGACATTCGGCACTGATACGCGGCTTCTTTc                                                                >  1:1304160/1‑100 (MQ=255)
                                    cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa                                                               >  2:1236186/1‑100 (MQ=255)
                                      gCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                             <  2:563118/100‑1 (MQ=255)
                                        ggggaggggaGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATTCGCCACTGATCCGAGGTTTATTTCAGc                                                             >  1:903641/1‑98 (MQ=255)
                                             ggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCaa                                                      >  1:635710/1‑100 (MQ=255)
                                             ggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCaa                                                      >  1:1384787/1‑100 (MQ=255)
                                             ggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCaa                                                      >  1:1342983/1‑100 (MQ=255)
                                              gggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAc                                                     <  2:684591/100‑1 (MQ=255)
                                              gggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAc                                                     <  1:392956/100‑1 (MQ=255)
                                                    tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGt                                               <  2:182197/100‑1 (MQ=255)
                                                     aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                              <  2:812369/100‑1 (MQ=255)
                                                     aaaGTGAAAAAATAAAAAGCGGATAATCTCAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGGTACGAGGTTTATTTCAGCTCATCAACCATCGTg                                              <  2:1346313/100‑1 (MQ=255)
                                                      aaGTGAAAAAATAAAAAGCGGCTAATCTTATTAAGCAGGCCGGACACCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                              <  2:1510820/99‑1 (MQ=255)
                                                       aGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTAAGCTCATCAACCATCGTGAt                                            >  2:2144252/1‑100 (MQ=255)
                                                       aGTAAACAAAAAAAAAGCAGATCCTCTTAACAAGAAGGCTAGACAGAATCGTCATTTGGCACTGATACGAGGTTTATTTCTGCTCATCATccgtgatgat                                            <  2:1304154/100‑9 (MQ=255)
                                                        gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa                                           >  1:1096863/1‑100 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGTTTTATTTCAGCTCATCAACCATCGTGATAGc                                         <  2:697532/100‑1 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         <  2:1987137/100‑1 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         >  2:1270739/1‑100 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         >  2:1832231/1‑100 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         <  2:1776881/100‑1 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         <  2:1480402/100‑1 (MQ=255)
                                                          gAAAAAATAAAAAGCGGATAATATTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                         >  2:1302635/1‑100 (MQ=255)
                                                            aaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTc                                       <  1:1510956/100‑1 (MQ=255)
                                                              aaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCg                                      <  1:1876672/99‑1 (MQ=255)
                                                                aTAAAAAGCTGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc                                   <  2:1078052/100‑1 (MQ=255)
                                                                aTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc                                   <  1:2008787/100‑1 (MQ=255)
                                                                aTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc                                   <  1:916377/100‑1 (MQ=255)
                                                                   aaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCCTCAACCATCGTGATAGCTCGACCAat                                >  2:712855/1‑100 (MQ=255)
                                                                    aaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAata                               >  2:1214670/1‑100 (MQ=255)
                                                                     aaGCGGATAATCTTAATAAGCAGGCCGTACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAatat                              <  2:1915984/100‑1 (MQ=255)
                                                                     aaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAatat                              >  1:1486071/1‑100 (MQ=255)
                                                                      aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata                             >  1:1736561/1‑100 (MQ=255)
                                                                      aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata                             >  1:1952597/1‑100 (MQ=255)
                                                                        cGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttaccccccctcccccctgg                           <  1:523325‑M2/100‑64 (MQ=255)
                                                                           aTAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTa                         <  1:473337/99‑1 (MQ=255)
                                                                            tAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGc                       <  1:579563/100‑1 (MQ=255)
                                                                            tAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGc                       <  1:563306/100‑1 (MQ=255)
                                                                            tAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGATTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGc                       <  2:1692056/100‑1 (MQ=255)
                                                                               tCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCgg                    <  2:1286418/100‑1 (MQ=255)
                                                                               tCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCgg                    >  1:221945/1‑100 (MQ=255)
                                                                                cTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCATTGATACGATGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGc                   <  2:2117631/100‑1 (MQ=255)
                                                                                 ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                  >  1:1982804/1‑100 (MQ=255)
                                                                                  taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAACCGGCGt                 >  2:151979/1‑100 (MQ=255)
                                                                                    ataaGCAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacttcccctccccgctggtttatttaatgt               <  1:1186674‑M2/100‑76 (MQ=255)
                                                                                     taaGCAGGACGGACAGGATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTTGTCTAATATAGTTAGCCGGCGTc                <  2:1008810/98‑1 (MQ=255)
                                                                                        gCAGGCCGGACAGCATCGCCAtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttac           <  1:1793841‑M2/100‑80 (MQ=255)
                                                                                        gCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATc             <  1:439458/98‑1 (MQ=255)
                                                                                        gCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGc           >  1:1430198/1‑100 (MQ=255)
                                                                                         cAGGCCGGACAGCATCGCCAtacagcatgcttattaagattatacgctttttattttttcactttacctcccctacccgctggtttatttaatggttcac          <  2:196486‑M2/100‑81 (MQ=255)
                                                                                         cAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCt          >  1:1195379/1‑100 (MQ=255)
                                                                                           ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt        >  1:414942/1‑100 (MQ=255)
                                                                                           ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt        <  2:1515623/100‑1 (MQ=255)
                                                                                             cctgACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc       <  1:1207570/96‑1 (MQ=255)
                                                                                             ccGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa      >  2:1647186/1‑100 (MQ=255)
                                                                                              cGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAg     <  2:1046602/100‑1 (MQ=255)
                                                                                               ggAtggcgatgctgtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacccccata    <  2:1565904‑M1/100‑98 (MQ=255)
                                                                                               ggACAGCATCGCCATCCGGCACTGATACGAAGCTTATTTCAGCTCATCAACTATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCAGCGCTTTCAg     <  2:314425/99‑1 (MQ=255)
                                                                                                gAtggcgatgctgtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacccccat     >  2:831088‑M1/1‑2 (MQ=255)
                                                                                                gACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGc   <  2:676002/100‑1 (MQ=255)
                                                                                                 atggcgatgctgtccggcctgcttattaagattatccgctttttattttttcactttacctcccctccccgctggtttatttaatgtttacccccataac  <  2:514003‑M1/100‑100 (MQ=255)
                                                                                                 aCAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCg  >  1:1509302/1‑100 (MQ=255)
                                                                                                 aCAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCg  >  1:1866720/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
CGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCG  >  NC_000913/1190488‑1190684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.