New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1929976NA (NA)3 (0.040) 3/166 NT NA noncoding (54/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1930006 NA (NA)noncoding (84/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences

TGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCA  >  NC_000913/1929879‑1930074
                                                                                                 |                                                                                                  
tGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGgg                                                                                                  >  2:1670022‑M1/1‑98 (MQ=255)
 gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                 >  2:1124811‑M1/1‑97 (MQ=255)
   aaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcgg                                                                                               <  1:457783‑M1/100‑6 (MQ=255)
     gtagtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGAc                                                                                             <  1:890679/100‑1 (MQ=255)
        gtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAg                                                                                          >  2:2114566/1‑100 (MQ=255)
         tttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAgg                                                                                         >  1:1076435/1‑100 (MQ=255)
         tttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAgg                                                                                         <  2:383410/100‑1 (MQ=255)
           tGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCa                                                                                       <  1:141390/100‑1 (MQ=255)
              cGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTc                                                                                    >  1:2156077/1‑100 (MQ=255)
               gTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcg                                                                                   >  2:1619311/1‑100 (MQ=255)
               gTTTTAAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGCGGCGGACAAGGCACt                                                                                     >  1:1946566/1‑98 (MQ=255)
                  ttGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCgcgc                                                                                <  1:2036847/100‑1 (MQ=255)
                    gAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgccg                                                                              <  2:107892/100‑1 (MQ=255)
                     aGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgccgc                                                                             >  1:2054770/1‑100 (MQ=255)
                      gTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCa                                                                            >  1:1200270/1‑100 (MQ=255)
                        cgCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGAGTGTGGTGCGTTCTGAGGCGGACAAGGCACTCGCGCCGCa                                                                            >  2:259112/2‑98 (MQ=255)
                         gCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCC                                                                         <  1:343246‑M2/100‑1 (MQ=255)
                          cATTGTTCGATCCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCATTCTGGGGCGGACAAGGCACTCGCGCCGCATCCG                                                                        <  2:1173336‑M2/100‑1 (MQ=255)
                            ttGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCC                                                                      >  2:1933625‑M2/1‑100 (MQ=255)
                              gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGTGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCaa                                                                    >  1:152919/1‑100 (MQ=255)
                               tttGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgcccca                                                                   <  1:991258‑M1/100‑34 (MQ=255)
                               tttGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAAc                                                                   <  1:394180/100‑1 (MQ=255)
                                ttGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgccccag                                                                  <  1:231828‑M1/100‑35 (MQ=255)
                                 tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGAACTCGCGCCGCATCCGCCAACAg                                                                 >  2:61723/1‑100 (MQ=255)
                                  gATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgccccaga                                                                 <  1:2167539‑M1/99‑36 (MQ=255)
                                   aTGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTc                                                               <  2:1790574/100‑1 (MQ=255)
                                     atcgtaggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCaa                                                             >  2:202417‑M2/40‑100 (MQ=255)
                                       tGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATc                                                           <  1:1029394/100‑1 (MQ=255)
                                       tGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATc                                                           <  1:725505/100‑1 (MQ=255)
                                        gATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCg                                                          >  2:709613/1‑100 (MQ=255)
                                         taggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGa                                                         >  1:666959‑M2/36‑100 (MQ=255)
                                          aggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGaa                                                        >  1:1946449‑M2/35‑100 (MQ=255)
                                            gcctgagaagacgcaacagcgtcttctcaggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                      >  1:2170169‑M2/33‑100 (MQ=255)
                                            GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                      <  2:1625665‑M1/100‑1 (MQ=255)
                                             CCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTa                                                     >  2:2192183‑M1/1‑100 (MQ=255)
                                             CCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTa                                                     <  1:42679‑M1/100‑1 (MQ=255)
                                              CCGATGCGACGCTGTTGAGTATTCTCAGGCCTACGATTGTGGTGCGTTCTGAGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTAt                                                    <  2:448332‑M1/100‑1 (MQ=255)
                                               cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGTGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                   <  2:152919/100‑1 (MQ=255)
                                               cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                   >  2:2129234/1‑100 (MQ=255)
                                               cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                   <  2:2209387/100‑1 (MQ=255)
                                                gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                  <  2:745168/100‑1 (MQ=255)
                                                gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                  >  1:739243/1‑100 (MQ=255)
                                                gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                  <  1:398754/100‑1 (MQ=255)
                                                gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                  <  2:1288499/100‑1 (MQ=255)
                                                 aTGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAg                                                 <  1:484099/100‑1 (MQ=255)
                                                    cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAg                                              >  2:1670762/1‑100 (MQ=255)
                                                       cGCTGTTGCGTCTTCTCAGGCCTACGATTGTTTTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCa                                           <  1:1186795/100‑1 (MQ=255)
                                                          tGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTa                                        >  2:667079/1‑100 (MQ=255)
                                                           gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa                                       >  1:1818261/1‑100 (MQ=255)
                                                           gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa                                       <  1:1207471/100‑1 (MQ=255)
                                                             tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                     <  1:2223294/100‑1 (MQ=255)
                                                             tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                     >  2:1207419/1‑100 (MQ=255)
                                                             tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATACGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                     >  2:1507225/1‑100 (MQ=255)
                                                                gTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGATGCCATTAAcgccg                                  >  2:190483/1‑100 (MQ=255)
                                                                  cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCAATAACGCCGCt                                >  2:1467812/1‑100 (MQ=255)
                                                                    tctcAGGCCTACGATTGTGGTGCGTTTTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGa                              <  1:639557/100‑1 (MQ=255)
                                                                     ctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGat                             >  2:1689403/1‑100 (MQ=255)
                                                                     ctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGat                             >  1:630020/1‑100 (MQ=255)
                                                                       cAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat                           >  1:1729380/1‑100 (MQ=255)
                                                                         ggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTc                         >  1:1675906‑M2/4‑100 (MQ=255)
                                                                          gcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTcc                        >  2:1917073‑M2/3‑100 (MQ=255)
                                                                          gcCTACGATTGTGGTGCGTTCCGAGGCGGACAAGGCACTCGCGCCGCACCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTcc                        >  2:1030512‑M2/3‑100 (MQ=255)
                                                                           cCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCg                       >  1:580189‑M2/2‑100 (MQ=255)
                                                                           cCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCg                       <  2:19865‑M2/99‑1 (MQ=255)
                                                                            cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                      <  2:1762828/100‑1 (MQ=255)
                                                                            cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                      <  1:668174/100‑1 (MQ=255)
                                                                            cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                      <  2:1596889/100‑1 (MQ=255)
                                                                             tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGcc                     <  1:2129248/100‑1 (MQ=255)
                                                                             tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGcc                     <  1:1207423/100‑1 (MQ=255)
                                                                              aCGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCa                    <  1:1193141/100‑1 (MQ=255)
                                                                              aCGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCa                    <  1:1565823/100‑1 (MQ=255)
                                                                               cGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCAt                   <  2:2042520/100‑1 (MQ=255)
                                                                               cGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCAt                   >  2:305149/1‑100 (MQ=255)
                                                                                  ttGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTcc                >  2:774577/1‑100 (MQ=255)
                                                                                    gtggtgCTTTCTGGCGCGGACAAGGCACTCGCGCCGCATCCGCCACCAGTCAAGCGAATTTTCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCg              <  2:1769803/100‑1 (MQ=255)
                                                                                    gtggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTccc               >  2:1321440/1‑99 (MQ=255)
                                                                                      ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt            <  1:1124814/100‑1 (MQ=255)
                                                                                      ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt            >  2:78880/1‑100 (MQ=255)
                                                                                       gtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCtt           >  2:633213/1‑100 (MQ=255)
                                                                                        tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt          <  1:1625676/100‑1 (MQ=255)
                                                                                        tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt          >  1:643209/1‑100 (MQ=255)
                                                                                        tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt          >  1:643161/1‑100 (MQ=255)
                                                                                            ttCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAg      <  1:612642/100‑1 (MQ=255)
                                                                                             tCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatc      <  1:2167539‑M2/99‑65 (MQ=255)
                                                                                              cTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaa    <  1:231828‑M2/100‑67 (MQ=255)
                                                                                               tGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaa   <  1:991258‑M2/100‑68 (MQ=255)
                                                                                                ggggCGGACAGGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa  >  2:738925/1‑100 (MQ=255)
                                                                                                ggggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa  <  2:1954178/100‑1 (MQ=255)
                                                                                                 |                                                                                                  
TGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCA  >  NC_000913/1929879‑1930074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.