New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1929976NA (NA)3 (0.040) 3/166 NT NA noncoding (54/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1930006 NA (NA)noncoding (84/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences

TTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTT  >  NC_000913/1929907‑1930105
                                                                                                   |                                                                                                   
ttGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCC                                                                                                     >  2:1933625‑M2/1‑100 (MQ=255)
  gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGTGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCaa                                                                                                   >  1:152919/1‑100 (MQ=255)
   tttGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAAc                                                                                                  <  1:394180/100‑1 (MQ=255)
     tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGAACTCGCGCCGCATCCGCCAACAg                                                                                                >  2:61723/1‑100 (MQ=255)
       aTGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTc                                                                                              <  2:1790574/100‑1 (MQ=255)
         atcgtaggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCaa                                                                                            >  2:202417‑M2/40‑100 (MQ=255)
           tGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATc                                                                                          <  1:1029394/100‑1 (MQ=255)
           tGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATc                                                                                          <  1:725505/100‑1 (MQ=255)
            gATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCg                                                                                         >  2:709613/1‑100 (MQ=255)
             taggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGa                                                                                        >  1:666959‑M2/36‑100 (MQ=255)
              aggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGaa                                                                                       >  1:1946449‑M2/35‑100 (MQ=255)
                gcctgagaagacgcaacagcgtcttctcaggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                                                     >  1:2170169‑M2/33‑100 (MQ=255)
                GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                                                     <  2:1625665‑M1/100‑1 (MQ=255)
                 CCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTa                                                                                    <  1:42679‑M1/100‑1 (MQ=255)
                 CCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTa                                                                                    >  2:2192183‑M1/1‑100 (MQ=255)
                  CCGATGCGACGCTGTTGAGTATTCTCAGGCCTACGATTGTGGTGCGTTCTGAGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTAt                                                                                   <  2:448332‑M1/100‑1 (MQ=255)
                   cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGTGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                                                  <  2:152919/100‑1 (MQ=255)
                   cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                                                  <  2:2209387/100‑1 (MQ=255)
                   cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                                                  >  2:2129234/1‑100 (MQ=255)
                    gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                                                 <  2:745168/100‑1 (MQ=255)
                    gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                                                 <  1:398754/100‑1 (MQ=255)
                    gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                                                 <  2:1288499/100‑1 (MQ=255)
                    gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                                                 >  1:739243/1‑100 (MQ=255)
                     aTGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAg                                                                                <  1:484099/100‑1 (MQ=255)
                        cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAg                                                                             >  2:1670762/1‑100 (MQ=255)
                           cGCTGTTGCGTCTTCTCAGGCCTACGATTGTTTTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCa                                                                          <  1:1186795/100‑1 (MQ=255)
                              tGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTa                                                                       >  2:667079/1‑100 (MQ=255)
                               gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa                                                                      <  1:1207471/100‑1 (MQ=255)
                               gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa                                                                      >  1:1818261/1‑100 (MQ=255)
                                 tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                                                    >  2:1207419/1‑100 (MQ=255)
                                 tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                                                    <  1:2223294/100‑1 (MQ=255)
                                 tGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATACGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcg                                                                    >  2:1507225/1‑100 (MQ=255)
                                    gTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGATGCCATTAAcgccg                                                                 >  2:190483/1‑100 (MQ=255)
                                      cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCAATAACGCCGCt                                                               >  2:1467812/1‑100 (MQ=255)
                                        tctcAGGCCTACGATTGTGGTGCGTTTTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGa                                                             <  1:639557/100‑1 (MQ=255)
                                         ctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGat                                                            >  2:1689403/1‑100 (MQ=255)
                                         ctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGat                                                            >  1:630020/1‑100 (MQ=255)
                                           cAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat                                                          >  1:1729380/1‑100 (MQ=255)
                                             ggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTc                                                        >  1:1675906‑M2/4‑100 (MQ=255)
                                              gcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTcc                                                       >  2:1917073‑M2/3‑100 (MQ=255)
                                              gcCTACGATTGTGGTGCGTTCCGAGGCGGACAAGGCACTCGCGCCGCACCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTcc                                                       >  2:1030512‑M2/3‑100 (MQ=255)
                                               cCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCg                                                      >  1:580189‑M2/2‑100 (MQ=255)
                                               cCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCg                                                      <  2:19865‑M2/99‑1 (MQ=255)
                                                cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                                                     <  2:1762828/100‑1 (MQ=255)
                                                cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                                                     <  1:668174/100‑1 (MQ=255)
                                                cTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGc                                                     <  2:1596889/100‑1 (MQ=255)
                                                 tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGcc                                                    <  1:1207423/100‑1 (MQ=255)
                                                 tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGcc                                                    <  1:2129248/100‑1 (MQ=255)
                                                  aCGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCa                                                   <  1:1565823/100‑1 (MQ=255)
                                                  aCGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCa                                                   <  1:1193141/100‑1 (MQ=255)
                                                   cGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCAt                                                  >  2:305149/1‑100 (MQ=255)
                                                   cGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCAt                                                  <  2:2042520/100‑1 (MQ=255)
                                                      ttGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTcc                                               >  2:774577/1‑100 (MQ=255)
                                                        gtggtgCTTTCTGGCGCGGACAAGGCACTCGCGCCGCATCCGCCACCAGTCAAGCGAATTTTCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCg                                             <  2:1769803/100‑1 (MQ=255)
                                                        gtggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTccc                                              >  2:1321440/1‑99 (MQ=255)
                                                          ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt                                           <  1:1124814/100‑1 (MQ=255)
                                                          ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt                                           >  2:78880/1‑100 (MQ=255)
                                                           gtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCtt                                          >  2:633213/1‑100 (MQ=255)
                                                            tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt                                         >  1:643209/1‑100 (MQ=255)
                                                            tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt                                         >  1:643161/1‑100 (MQ=255)
                                                            tgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCttt                                         <  1:1625676/100‑1 (MQ=255)
                                                                ttCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAg                                     <  1:612642/100‑1 (MQ=255)
                                                                 tCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatc                                     <  1:2167539‑M2/99‑65 (MQ=255)
                                                                  cTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaa                                   <  1:231828‑M2/100‑67 (MQ=255)
                                                                   tGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaa                                  <  1:991258‑M2/100‑68 (MQ=255)
                                                                    ggggCGGACAGGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa                                 >  2:738925/1‑100 (MQ=255)
                                                                    ggggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa                                 <  2:1954178/100‑1 (MQ=255)
                                                                        cGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCt                             >  2:1750957/1‑100 (MQ=255)
                                                                         ggACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTg                            >  1:1662244/1‑100 (MQ=255)
                                                                           aCAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGAc                          <  1:1317415/100‑1 (MQ=255)
                                                                            cAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGAcc                         >  1:1394630/1‑100 (MQ=255)
                                                                               ggCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTgg                      <  2:809671/100‑1 (MQ=255)
                                                                                gCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGt                     <  1:1311699/100‑1 (MQ=255)
                                                                                gCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCAATAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGt                     <  2:739243/100‑1 (MQ=255)
                                                                                 cACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTa                    >  2:2154956/1‑100 (MQ=255)
                                                                                  aCTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTaa                   >  1:1859871/1‑100 (MQ=255)
                                                                                   cTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAAt                  >  1:745932/1‑100 (MQ=255)
                                                                                   cTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAAt                  <  1:1670773/100‑1 (MQ=255)
                                                                                     cgcgCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGa                >  2:122130/1‑100 (MQ=255)
                                                                                       cgccgcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAat              <  1:1917086/100‑1 (MQ=255)
                                                                                          cgcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAat              <  1:121772/97‑1 (MQ=255)
                                                                                          cgcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAAtctc           >  2:1955497/1‑100 (MQ=255)
                                                                                           gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAata             >  1:472466/1‑97 (MQ=255)
                                                                                           gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCg          >  1:1133704/1‑100 (MQ=255)
                                                                                               ccGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaacaatgccactcaaaacgacaaactactt      <  1:457783‑M2/100‑96 (MQ=255)
                                                                                                cGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACt     <  2:2180346/100‑1 (MQ=255)
                                                                                                 gCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaacaatgccactcaaaacgacaaactactttc    >  2:1124811‑M2/1‑3 (MQ=255)
                                                                                                 gCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACtt    >  1:1496963/1‑100 (MQ=255)
                                                                                                 gCCAACAGTCAATCGAATTATCAGAAGACATTAACGCCGCTGATATTCCGCCATTCCCTCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACtt    >  2:518177/1‑100 (MQ=255)
                                                                                                  ccccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaacaatgccactcaaaacgacaaactactttca   >  2:1670022‑M2/1‑2 (MQ=255)
                                                                                                   cAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACtttt  <  1:374981/100‑1 (MQ=255)
                                                                                                   cAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACtttt  >  1:749296/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTT  >  NC_000913/1929907‑1930105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.