BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2662308 =	NA (NA)	3 (0.040) +GCCGTT	3/166	NT	NA	intergenic (‑177/+275)	iscR/trmJ	isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress‑ and iron starvation‑inducible; autorepressor/tRNA mC32,mU32 2'‑O‑methyltransferase, SAM‑dependent
*	?	NC_000913	2662360 =	NA (NA)	3 (0.040) +GCCGTT	3/166	NT	NA	noncoding (52/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 117 total aligned reads displayed.

CTGACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATG  >  NC_000913/2662210‑2662407

cTGACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCtgttg                                                                                                    >  2:167654/1‑100 (MQ=255)

  gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                  <  1:350911/100‑1 (MQ=255)

   aCATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCg                                                                                                 <  1:1126967/100‑1 (MQ=255)

    cATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCgg                                                                                                <  2:309929/100‑1 (MQ=255)

     aTTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGa                                                                                               >  1:1186655/1‑100 (MQ=255)

      ttCTCGAGTAAATTGGTAAACTTTTTATTTGACTGATTTATTGGGGTATTTAACCTTCTTTGCCATTTTTTTATCGTGGCGTTGGTACCTGTTGTCGGAt                                                                                              <  2:1539733/100‑1 (MQ=255)

      ttCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGa                                                                                               <  1:2005791/99‑1 (MQ=255)

       ttccGAGTTAATTGGTCAACTATTTACTTGACTTATTTAGTCGTGTATTTAACCTGCTGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGAt                                                                                              <  2:1539803/97‑1 (MQ=255)

          cGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcgg                                                                                          >  2:1188893/1‑100 (MQ=255)

          cGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTAAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcgg                                                                                          >  2:166636/1‑100 (MQ=255)

            aGTAAATTGGTCAACTATTTACTTGATTGATTTAGTCGGGTATTTAACCTTTAGTGCCATTTTTTTATCGTGGCGTTTGTTCCTTTTGTCGGATgcggc                                                                                         <  2:712946/99‑1 (MQ=255)

            aGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggc                                                                                         >  2:197575/1‑99 (MQ=255)

             gTAAATTGGTCAACTATTTACTTGACTGATTTAGTAGGGTATTTAACATTCAGTGCCATTTTTTTATAGTGGCGTTTGTACCTGTTGTCGGATGCGGCGt                                                                                       >  2:1755371/1‑100 (MQ=255)

              tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                      <  2:1423234/100‑1 (MQ=255)

              tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                      <  1:102117/100‑1 (MQ=255)

               aaaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGa                                                                                     <  2:1143891/100‑1 (MQ=255)

                 aTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAAc                                                                                   <  1:2127560/100‑1 (MQ=255)

                  ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                  <  2:1056739/100‑1 (MQ=255)

                  ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                  <  1:1190481/100‑1 (MQ=255)

                   tGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                 >  2:1373290/1‑100 (MQ=255)

                    ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                >  1:218652/1‑100 (MQ=255)

                     gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                               <  2:1148746/100‑1 (MQ=255)

                     gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                               >  2:2217977/1‑100 (MQ=255)

                       cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                             <  2:1833391/100‑1 (MQ=255)

                        aaCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCatat                                                                            >  1:790995/1‑100 (MQ=255)

                         aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCatat                                                                            <  1:413114/99‑1 (MQ=255)

                         aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                           <  2:467175/100‑1 (MQ=255)

                         aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                           >  1:2174524/1‑100 (MQ=255)

                          cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATcc                                                                          <  1:1960464/100‑1 (MQ=255)

                           tATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGTGTGAACGCCATATCCg                                                                         >  2:2175393/1‑100 (MQ=255)

                            aTTTACTTGAATGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGAGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGc                                                                        >  2:310370/1‑100 (MQ=255)

                              ttACTTGACTGATTTAGTCGTGTATTTAACCTTCAGTGCCATTTTTTTATCGCGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                      <  1:584615/100‑1 (MQ=255)

                              ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                      <  1:1457571/100‑1 (MQ=255)

                                aCTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                    >  1:1757974/1‑100 (MQ=255)

                                aCTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                    >  1:938480/1‑100 (MQ=255)

                                 cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                   <  2:2167093/100‑1 (MQ=255)

                                   tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                 <  1:1562830/100‑1 (MQ=255)

                                    gACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGt                                                                <  1:1294664/100‑1 (MQ=255)

                                        ttccgatctgggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                            <  1:401026/91‑1 (MQ=255)

                                        gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                            >  1:876472/1‑100 (MQ=255)

                                         aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                            <  1:292291/99‑1 (MQ=255)

                                         aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                           >  2:1856950/1‑100 (MQ=255)

                                         aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                           >  2:2151690/1‑100 (MQ=255)

                                          tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                          <  2:297985/100‑1 (MQ=255)

                                          tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                          >  1:804285/1‑100 (MQ=255)

                                            tAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTaca                                                        <  2:1188349/100‑1 (MQ=255)

                                            tAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTaca                                                        >  1:1501994/1‑100 (MQ=255)

                                                cgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcaacggcTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGt                                                    <  1:1334219‑M1/50‑1 (MQ=255)

                                                cGGGTATTTAACCTTCAGTGCCATTTTTTTATTGTGTCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                    >  2:680369/1‑100 (MQ=255)

                                                 gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTgagatcggaa                                                   >  2:401027/1‑91 (MQ=255)

                                                 gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                   <  1:795819/100‑1 (MQ=255)

                                                   gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                 <  1:356202/100‑1 (MQ=255)

                                                    tATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGc                                                >  2:1770896/1‑100 (MQ=255)

                                                     aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                               <  1:552700/100‑1 (MQ=255)

                                                     aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                               >  1:1203614/1‑100 (MQ=255)

                                                      tttAACCTTCAGTGCCATTTTTTTATTTTTGCTTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGTCt                                              >  2:1430901/1‑100 (MQ=37)

                                                       ttATCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                             <  1:1809124/100‑1 (MQ=255)

                                                       ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                             <  1:958003/100‑1 (MQ=255)

                                                        tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                            >  1:1266116/1‑100 (MQ=255)

                                                         ttgcctgatgcgacgcgtaatgcgtcttatcaggcaacggcTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGAt                                           <  1:2193301‑M1/59‑1 (MQ=255)

                                                          aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                          <  2:1002400/100‑1 (MQ=255)

                                                           gcctgatgcgacgtgtaatgcgtcttatcaggcaacggcTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATaa                                         <  2:232754‑M1/61‑1 (MQ=255)

                                                           ccTTCAGTGTCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                         <  2:1080625/100‑1 (MQ=255)

                                                           ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGTGGTTCTGTACACTGTAGGCCTGATaa                                         >  2:1788559/1‑100 (MQ=255)

                                                            cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                         <  1:1150780/99‑1 (MQ=255)

                                                            cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAg                                        <  2:2115829/100‑1 (MQ=255)

                                                            cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAg                                        <  2:155880/100‑1 (MQ=255)

                                                                aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGc                                    >  2:1974050/1‑100 (MQ=255)

                                                                 gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                   >  1:1876057/1‑100 (MQ=255)

                                                                    ccATGTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGTCGTGAGCGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                 <  1:1782759/99‑1 (MQ=255)

                                                                     cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTa                                >  1:354336/1‑99 (MQ=255)

                                                                     cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                               >  2:169752/1‑100 (MQ=255)

                                                                      aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                              <  2:2103974/100‑1 (MQ=255)

                                                                       tttttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcgc                             <  1:2040651/100‑1 (MQ=255)

                                                                         tttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGt                           >  2:1289174/1‑100 (MQ=255)

                                                                          ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                          >  1:181547/1‑100 (MQ=255)

                                                                          ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                          <  1:169752/100‑1 (MQ=255)

                                                                          ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                          >  1:1833933/1‑100 (MQ=255)

                                                                           tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                         >  2:423962/1‑100 (MQ=255)

                                                                           tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                         <  1:1900490/100‑1 (MQ=255)

                                                                           tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                         <  2:110851/100‑1 (MQ=255)

                                                                            ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                        <  1:1881373/100‑1 (MQ=255)

                                                                             tctcctGGCGTTTGTACCTGGTGTCGGCTGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAGGACGCATTACGCGTCGCa                       <  2:2126814/95‑1 (MQ=21)

                                                                              aTCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAt                      >  2:79731/1‑100 (MQ=255)

                                                                               tCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATc                     <  2:1107470/100‑1 (MQ=255)

                                                                                 gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCGTAATGCGTCTTATCAg                   <  1:2248372/100‑1 (MQ=21)

                                                                                   ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                 >  1:1182804/1‑100 (MQ=255)

                                                                                      gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc              <  2:1953333/100‑1 (MQ=255)

                                                                                      gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc              <  2:115295/100‑1 (MQ=255)

                                                                                      gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc              >  1:1051549/1‑100 (MQ=255)

                                                                                         tGTACCTGTTGTCGGATGCGGCGTGAACGTCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc           <  1:231270/100‑1 (MQ=255)

                                                                                           tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg         >  1:1761145/1‑100 (MQ=255)

                                                                                           tACCTGTTGTCGGATGCGGCGTGAACGCCATATCAGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACgg            >  2:203159/1‑97 (MQ=255)

                                                                                            tcttgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt        <  1:1503637/97‑1 (MQ=255)

                                                                                             ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc       >  1:1483338/1‑100 (MQ=255)

                                                                                               tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACTCGTCGCATCAGGCAACGGCTGTCgg     >  1:136740/1‑100 (MQ=255)

                                                                                               tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtaga     >  2:1503627/1‑97 (MQ=255)

                                                                                               tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACAGATGt        >  1:585236/1‑97 (MQ=255)

                                                                                                 ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt   <  2:1007285/100‑1 (MQ=255)

                                                                                                 ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt   <  1:91776/100‑1 (MQ=255)

CTGACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATG  >  NC_000913/2662210‑2662407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.