New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662308 =NA (NA)3 (0.040)
+GCCGTT		 3/166 NT NA intergenic (‑177/+275) iscR/trmJ isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress‑ and iron starvation‑inducible; autorepressor/tRNA mC32,mU32 2'‑O‑methyltransferase, SAM‑dependent
?NC_000913 2662360 = NA (NA)noncoding (52/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 109 total aligned reads displayed.

GTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGT  >  NC_000913/2662261‑2662448
                                                                                                    |                                                                                        
gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAgg                                                                                          <  1:356202/100‑1 (MQ=255)
 tATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGc                                                                                         >  2:1770896/1‑100 (MQ=255)
  aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGcc                                                                                        >  1:1203614/1‑100 (MQ=255)
  aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGcc                                                                                        <  1:552700/100‑1 (MQ=255)
   tttAACCTTCAGTGCCATTTTTTTATTTTTGCTTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGTCt                                                                                       >  2:1430901/1‑100 (MQ=37)
    ttATCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTg                                                                                      <  1:1809124/100‑1 (MQ=255)
    ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTg                                                                                      <  1:958003/100‑1 (MQ=255)
     tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGa                                                                                     >  1:1266116/1‑100 (MQ=255)
      ttgcctgatgcgacgcgtaatgcgtcttatcaggcaacggcTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTC‑TGTTCACTGTAGGCCTGAt                                                                                    <  1:2193301‑M1/59‑1 (MQ=255)
       aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATa                                                                                   <  2:1002400/100‑1 (MQ=255)
        ccTTCAGTGTCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATaa                                                                                  <  2:1080625/100‑1 (MQ=255)
         cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATaa                                                                                  <  1:1150780/99‑1 (MQ=255)
         cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAg                                                                                 <  2:155880/100‑1 (MQ=255)
         cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAg                                                                                 <  2:2115829/100‑1 (MQ=255)
         cTTCAGTGCCATTTGTTTATCGTTGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAg                                                                                 <  2:1401049/100‑1 (MQ=255)
             aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGc                                                                             >  2:1974050/1‑100 (MQ=255)
              gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCa                                                                            >  1:1876057/1‑100 (MQ=255)
                gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCAtt                                                                          >  1:234996/1‑100 (MQ=255)
                 ccATGTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGTCGTGAGCGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCAtt                                                                          <  1:1782759/99‑1 (MQ=255)
                  cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTa                                                                         >  1:354336/1‑99 (MQ=255)
                  cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTAc                                                                        >  2:169752/1‑100 (MQ=255)
                   aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTAcg                                                                       <  2:2103974/100‑1 (MQ=255)
                    tttttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTAcgc                                                                      <  1:2040651/100‑1 (MQ=255)
                    tttttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTAcgc                                                                      <  1:2040716/100‑1 (MQ=255)
                      tttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGt                                                                    >  2:1289174/1‑100 (MQ=255)
                       ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                                                                   >  1:181547/1‑100 (MQ=255)
                       ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                                                                   <  1:169752/100‑1 (MQ=255)
                        tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                                                                  <  1:1900490/100‑1 (MQ=255)
                        tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                                                                  <  2:110851/100‑1 (MQ=255)
                        tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                                                                  >  2:423962/1‑100 (MQ=255)
                         ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                                                                 <  1:1881373/100‑1 (MQ=255)
                          tctcctGGCGTTTGTACCTGGTGTCGGCTGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAGGACGCATTACGCGTCGCa                                                                <  2:2126814/95‑1 (MQ=21)
                           aTCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAt                                                               >  2:79731/1‑100 (MQ=255)
                            tCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCa                                                                <  2:1644702/98‑1 (MQ=255)
                                ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                                                          >  1:1182804/1‑100 (MQ=255)
                                   gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                                                       <  2:115295/100‑1 (MQ=255)
                                   gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                                                       >  1:481699/1‑100 (MQ=255)
                                   gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                                                       >  1:1051549/1‑100 (MQ=255)
                                   gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                                                       <  2:1953333/100‑1 (MQ=255)
                                      tGTACCTGTTGTCGGATGCGGCGTGAACGTCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc                                                    <  1:231270/100‑1 (MQ=255)
                                        tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg                                                  >  1:1761145/1‑100 (MQ=255)
                                        tACCTGTTGTCGGATGCGGCGTGAACGCCATATCAGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACgg                                                     >  2:203159/1‑97 (MQ=255)
                                         tcttgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt                                                 <  1:1503637/97‑1 (MQ=255)
                                          ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc                                                >  1:1483338/1‑100 (MQ=255)
                                           cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg                                               <  2:218652/100‑1 (MQ=255)
                                            tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACTCGTCGCATCAGGCAACGGCTGTCgg                                              >  1:136740/1‑100 (MQ=255)
                                              ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt                                            <  1:91776/100‑1 (MQ=255)
                                              ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt                                            <  2:1006738/100‑1 (MQ=255)
                                              ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt                                            <  2:1007285/100‑1 (MQ=255)
                                               tgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATg                                           <  2:1148389/100‑1 (MQ=255)
                                                gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc                                          >  2:1446886/1‑100 (MQ=255)
                                                gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc                                          >  2:2032411/1‑100 (MQ=255)
                                                gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGACGGAGgc                                          >  2:326512/1‑100 (MQ=255)
                                                   ggATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggc                                       >  2:660053/1‑100 (MQ=255)
                                                   ggATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggc                                       >  1:2082898/1‑100 (MQ=255)
                                                    gATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggcg                                      <  1:70572/100‑1 (MQ=255)
                                                     aTGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggcg                                      <  2:1942247/99‑1 (MQ=255)
                                                      tGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTg                                    >  1:886198/1‑100 (MQ=255)
                                                      tGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTg                                    <  1:286906/100‑1 (MQ=255)
                                                        cggcgTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGaa                                  <  1:1289180/100‑1 (MQ=255)
                                                          gcgTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACg                                <  1:1067199/100‑1 (MQ=255)
                                                          gcgTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACg                                <  1:1919547/100‑1 (MQ=255)
                                                            gTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGcc                              <  1:1879181/100‑1 (MQ=255)
                                                             tGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCt                             <  1:1180857/100‑1 (MQ=255)
                                                                aCGCCATATCCGCCCTGGGGTTT‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTAt                          <  2:1591960/100‑1 (MQ=255)
                                                                aCGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTa                           >  2:1723968/1‑99 (MQ=255)
                                                                aCGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTAt                          >  2:1649456/1‑100 (MQ=255)
                                                                aCGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCAGATGCCGCGCGAACGCCTTAt                          >  2:1558082/1‑100 (MQ=255)
                                                                 cGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATc                         <  1:900835/100‑1 (MQ=255)
                                                                 cGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATc                         >  2:285276/1‑100 (MQ=255)
                                                                    cATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGa                      <  2:1757963/100‑1 (MQ=255)
                                                                      tatCCTTCCTTGGTTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATTCGGCGTGAACGCCTTATCCGAcc                    <  2:354337/100‑1 (MQ=11)
                                                                         ccGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc                 >  1:915710/1‑100 (MQ=255)
                                                                         ccGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc                 >  1:394115/1‑100 (MQ=255)
                                                                         ccGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc                 >  1:126994/1‑100 (MQ=255)
                                                                         ccGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc                 >  1:1231161/1‑100 (MQ=255)
                                                                         ccGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGGGTACGTCTTATCCGACCTa                  >  2:1372852/1‑99 (MQ=255)
                                                                          cGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGTTGCGGCGTGGACGCCTTATCCGa                      >  2:869980/1‑94 (MQ=255)
                                                                          cGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACg                <  2:1290494/100‑1 (MQ=255)
                                                                          cGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACg                >  1:1409660/1‑100 (MQ=255)
                                                                            cccTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTCCGGt              >  1:1672530/1‑100 (MQ=255)
                                                                            cccTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGt              <  2:573676/100‑1 (MQ=40)
                                                                            cccTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGt              >  1:2054419/1‑100 (MQ=40)
                                                                            cccTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGGGAACGCCTTATCCGACCTACGGt              >  1:1672572/1‑100 (MQ=255)
                                                                              cTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTc            >  1:55235/1‑100 (MQ=38)
                                                                              cTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTc            <  2:2041886/100‑1 (MQ=38)
                                                                                 tggTTCTTGTACTCTGTAGGCCTTATAATACTCATTACTCGTCGCATCAGGCAACTGCTGTCGTATGCGGCGTGTACTCCTTATCCGACCTTCGGTTCTg          <  2:1389116/99‑1 (MQ=11)
                                                                                 gggTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGt         <  2:1726516/100‑1 (MQ=35)
                                                                                   gTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGTATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTc       <  1:1216106/100‑1 (MQ=18)
                                                                                   gTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTc       >  1:594979/1‑100 (MQ=33)
                                                                                     tC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCAc     <  1:2175408/100‑1 (MQ=32)
                                                                                     tC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCAc     <  1:572120/100‑1 (MQ=33)
                                                                                      c‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGTTGCGGCGTGTACGCTTTATCCGCACTACGGTTCTGttacct    >  2:212113/1‑96 (MQ=11)
                                                                                      c‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACt    <  2:288539/100‑1 (MQ=32)
                                                                                        tGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGTTCACTg   >  2:1480849/1‑100 (MQ=17)
                                                                                        tGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTg   >  1:456595/1‑100 (MQ=32)
                                                                                        tGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTg   <  2:1761134/100‑1 (MQ=32)
                                                                                         gTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGt  <  1:167654/100‑1 (MQ=32)
                                                                                         gTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGt  >  2:874859/1‑100 (MQ=32)
                                                                                           acacTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGt  >  2:913067/1‑98 (MQ=11)
                                                                                                    |                                                                                        
GTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTC‑TGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGT  >  NC_000913/2662261‑2662448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.