BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3910443 =	NA (NA)	3 (0.040)	3/168	NT	NA	noncoding (1/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3910474 =	NA (NA)	3 (0.040)	3/168	NT	NA	noncoding (32/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 106 total aligned reads displayed.

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     <  1:1702793/100‑1 (MQ=255)

 ttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:1456839‑M1/68‑100 (MQ=255)

 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:546921/1‑100 (MQ=255)

 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAA‑ACCGTACCCGGCCTg                                                                                                   <  2:1265945/100‑1 (MQ=255)

  aaGCATGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   <  1:2016628/100‑1 (MQ=255)

   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  >  1:2099306/1‑100 (MQ=255)

    gCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                 <  2:788414/100‑1 (MQ=255)

     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                <  1:1111323/100‑1 (MQ=255)

      aGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGt                                                                                               <  1:1499796/100‑1 (MQ=255)

       ggCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt                                                                                              <  1:1622911/100‑1 (MQ=255)

            tggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  1:216045‑M1/57‑100 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:1620412/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  1:210122/1‑100 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  1:1615305/1‑100 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  2:308312/1‑100 (MQ=255)

             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  1:796990/100‑1 (MQ=255)

              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGGTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                       <  1:297787/100‑1 (MQ=255)

               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      >  2:671533/1‑100 (MQ=255)

               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCAGCGTAGAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      >  2:1508216/1‑100 (MQ=255)

                gCAGCCATAATGTACTGTTCAGTTAAACGCGTTTACAAAGTCGGTTTGTAATGCCGGATGCTGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTa                                                                                     >  2:1874869/1‑100 (MQ=255)

                gCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTa                                                                                     >  1:2026639/1‑100 (MQ=255)

                     tggtcgagattctTCAGTTAAACGCGTTTACAAATTCATTTTGTAATGCCGGATTCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                                <  2:2061146/90‑1 (MQ=255)

                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                              <  1:2023626/100‑1 (MQ=255)

                         aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCt                                                                             >  1:177277/1‑99 (MQ=255)

                         aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGAATGCGGCGTAAAACCCCGTACCCGGCCTGGCGTTTTATTAGTACAGCAGCtt                                                                            >  2:1899025/1‑100 (MQ=255)

                         aGTTACTCTTCAGTTAAACGCGTGTACAAAGTCATTTTGTAATGCCGTATGCGGTGTAAAACACCGTGTGCGTCTTTTATTTTTATTAGTACAGCGGCt                                                                             <  2:893018/99‑1 (MQ=255)

                         aGTTACTCGTCAGTTGAACGCGTGAACAAGGTCGGTTTGTAATTCCGAATGCGGTGTAGAAAGCCGTATTCGGCTTGGAGTGTTATTAGTACAGCGGc                                                                              <  2:51890/98‑1 (MQ=255)

                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:488858/1‑100 (MQ=255)

                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:789348/1‑100 (MQ=255)

                                  ttaGTTACACGCGTTTACAAAGTCATTTTGTAATGCCGGACGCGGCGTACAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                                                   <  1:1219921/98‑1 (MQ=255)

                                   cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  <  1:1999017/100‑1 (MQ=255)

                                    aGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGt                                                                 >  1:1694673/1‑100 (MQ=255)

                                    aGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGCCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGt                                                                 >  1:74492/1‑100 (MQ=255)

                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACACAGCCTCACCGCTACTGTc                                                                >  2:1787189/1‑100 (MQ=255)

                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             >  2:2237387/1‑100 (MQ=255)

                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             >  1:251581/1‑100 (MQ=255)

                                          aCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTaa                                                           <  1:608863/100‑1 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  2:100964/100‑1 (MQ=255)

                                             cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAATACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        <  2:333490/100‑1 (MQ=255)

                                              gTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATAtt                                                       <  1:1909437/100‑1 (MQ=255)

                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  1:1911330/100‑1 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCATACCCGGCCTGGAGTTTTAATAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                    >  2:1222620/1‑100 (MQ=255)

                                                  aCAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTc                                                   <  1:319806/100‑1 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  <  1:2236870/100‑1 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  1:2248404/1‑100 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  2:1886647/1‑100 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  1:2157456/1‑100 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  2:1119641/1‑100 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  2:262183/1‑100 (MQ=255)

                                                    aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                                                 <  1:1078480/100‑1 (MQ=255)

                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              <  2:1079582/100‑1 (MQ=255)

                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              >  2:1937072/1‑100 (MQ=255)

                                                       aataaaactccaggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              >  1:216045‑M2/45‑100 (MQ=255)

                                                        tCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc                                             <  1:840031/100‑1 (MQ=255)

                                                         cATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACGGCTACTGTCTTTAATATTGGTCTTCCAc                                             >  1:866085/1‑99 (MQ=255)

                                                         cATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACg                                            <  2:704439/100‑1 (MQ=255)

                                                            tttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAg                                         >  1:1459687/1‑100 (MQ=255)

                                                              tGTAATGCCGGATGCGGCGTAAAACACCGTACCCGTCCTGTAGTTTTATTAGTACAGTGGCTTACCGCTACTGTCTTTTTTTTTGGTCTTCCACGCAgcg                                       <  2:869266/100‑1 (MQ=255)

                                                              tGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcg                                       >  2:1234318/1‑100 (MQ=255)

                                                                 aaTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGa                                    >  1:2139990/1‑100 (MQ=255)

                                                                 aaTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGa                                    >  1:509330/1‑100 (MQ=255)

                                                                  aggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGaa                                   >  1:1456839‑M2/34‑100 (MQ=255)

                                                                   tGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAc                                  <  2:2060172/100‑1 (MQ=255)

                                                                    gccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:1074822‑M2/32‑100 (MQ=255)

                                                                     CCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCt                                >  1:2198238‑M1/1‑100 (MQ=255)

                                                                     CCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCt                                <  2:618695‑M1/100‑1 (MQ=255)

                                                                     CCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGAGAACCt                                <  2:370720‑M1/100‑1 (MQ=255)

                                                                      CGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTg                               >  2:1463002‑M1/1‑100 (MQ=255)

                                                                        GATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGtt                             <  1:1779276‑M1/100‑1 (MQ=255)

                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:1722926/100‑1 (MQ=255)

                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  2:14474/100‑1 (MQ=255)

                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  2:1668390/100‑1 (MQ=255)

                                                                           gcggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCaa                          >  2:1625642/1‑100 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCaa                          <  1:932059/99‑1 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         <  1:2040523/100‑1 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         <  2:1306757/100‑1 (MQ=255)

                                                                             ggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACt                        <  2:1322612/100‑1 (MQ=255)

                                                                              gcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTa                       <  1:1262518/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  1:1979175/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  2:690504/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  2:2070194/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  2:59370/100‑1 (MQ=255)

                                                                                  aaaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACt                   >  1:595566/1‑100 (MQ=255)

                                                                                  aaaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACt                   >  1:14334/1‑100 (MQ=255)

                                                                                  aaaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACt                   >  2:2229073/1‑100 (MQ=255)

                                                                                   aaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTa                  >  1:1252821/1‑100 (MQ=255)

                                                                                    aaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTCATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAATaaaata                  >  1:25808/1‑94 (MQ=255)

                                                                                    aaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTAt                 >  1:358434/1‑100 (MQ=255)

                                                                                    aaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTAt                 >  2:111396/1‑100 (MQ=255)

                                                                                       acCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCg              <  1:1533116/100‑1 (MQ=255)

                                                                                        ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             >  2:1540830/1‑100 (MQ=255)

                                                                                         cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  1:111396/100‑1 (MQ=255)

                                                                                         cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  2:866084/100‑1 (MQ=255)

                                                                                          gTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCa           >  1:1394892/1‑100 (MQ=255)

                                                                                           tACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAg          <  1:779322/100‑1 (MQ=255)

                                                                                             cccGGCCTGGAGCTTTATTAGTACAGCGGCTTACCGCTACTGTCTTAAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        >  2:1245301/1‑100 (MQ=255)

                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTGCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     >  2:1432106‑M2/4‑100 (MQ=255)

                                                                                                  cCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCg   >  1:394974‑M2/2‑100 (MQ=255)

                                                                                                   cTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGt  <  2:2161132/100‑1 (MQ=255)

                                                                                                   cTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGt  >  2:1088529/1‑100 (MQ=255)

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.