Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	100%	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	99 [0]	[0] 99	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	83 (1.070)	61/170	NT	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
	?	NC_000913	1300698 =	0 (0.000)					intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAA  >  NC_000913/1300603‑1300795                                                                                                |                                                                                                  catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctcaataat                                                                                               <  2:1565963‑M2/5‑1 (MQ=255) catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataat                                                                                               >  2:685454‑M2/96‑100 (MQ=255) catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataat                                                                                               <  2:1077011‑M2/5‑1 (MQ=255)  atgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                              >  2:1438244‑M2/95‑100 (MQ=255)    gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                            >  2:1916884‑M2/93‑100 (MQ=255)    gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                            >  2:689442‑M2/93‑100 (MQ=255)        ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                        >  1:1232915‑M2/89‑100 (MQ=255)        ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                        <  1:323589‑M2/12‑1 (MQ=255)         tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtaggggaaagtgctaaATAATAATCAAtt                                                                                       >  2:698318‑M2/88‑100 (MQ=255)         tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                       >  2:1285684‑M2/88‑100 (MQ=255)         tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                       >  2:366356‑M2/88‑100 (MQ=255)          ttcgccacatcataatcctggacttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                      >  1:451840‑M2/87‑100 (MQ=255)            cgccacatcataatcctgggcttactgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATGAATTGtt                                                                                    >  2:2074001‑M2/85‑100 (MQ=255)             gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                   <  1:1260073‑M2/17‑1 (MQ=255)             gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcatttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                   >  2:231744‑M2/84‑100 (MQ=255)             gccacatcataatcctgggcttgctgaagaataattgaaatgatattactaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                   >  2:273629‑M2/84‑100 (MQ=255)               cacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                 >  2:461585‑M2/82‑100 (MQ=255)                     ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                           >  1:1007793‑M2/76‑100 (MQ=255)                      taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgt                                                                          <  2:182433‑M2/26‑1 (MQ=255)                        atccttggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                        <  2:5273‑M2/28‑1 (MQ=255)                        atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                        >  1:345732‑M2/73‑100 (MQ=255)                          cctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                      >  2:1398564‑M2/71‑100 (MQ=255)                          cctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                      >  1:1479091‑M2/71‑100 (MQ=255)                             gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTc                                                                   <  1:618921‑M2/33‑1 (MQ=255)                                cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCact                                                                <  1:1916767‑M2/36‑1 (MQ=255)                                cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCact                                                                <  1:2171321‑M2/36‑1 (MQ=255)                                 ttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                               <  1:473393‑M2/37‑1 (MQ=255)                                  tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                              >  1:1845811‑M2/63‑100 (MQ=255)                                    ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                            >  1:1106817‑M2/61‑100 (MQ=255)                                    ctgaagaataattgaaatgatattattaattacactgactttagtagagaaaagtgctaaATAATAATCAATTGTTAAATTATTATGCATTTAactac                                                              >  2:2126562‑M2/61‑98 (MQ=255)                                     tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                           <  1:1285690‑M2/41‑1 (MQ=255)                                     tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                           >  2:454716‑M2/60‑100 (MQ=255)                                      gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                          >  1:1132747‑M2/59‑100 (MQ=255)                                         gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                       >  2:1160237‑M2/56‑100 (MQ=255)                                         gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                       >  2:305466‑M2/56‑100 (MQ=255)                                         gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                       >  1:1238102‑M2/56‑100 (MQ=255)                                           ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                     <  2:2070732‑M2/47‑1 (MQ=255)                                           ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                     >  1:2146847‑M2/54‑100 (MQ=255)                                           ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                     >  1:2075886‑M2/54‑100 (MQ=255)                                            taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                    <  2:773594‑M2/48‑1 (MQ=255)                                            cgatctaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                    <  2:1925886‑M2/48‑1 (MQ=255)                                                 gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAg                                               <  2:1132744‑M2/53‑1 (MQ=255)                                                  aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAactgtaagatcg                                              >  1:1925899‑M2/47‑95 (MQ=255)                                                     tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                           <  2:1773986‑M2/57‑1 (MQ=255)                                                       atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                         <  2:1479081‑M2/59‑1 (MQ=255)                                                        tattattaattccactgcctttggtagaggaaagtgcttaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                        <  2:181742‑M2/60‑1 (MQ=255)                                                        tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                        >  1:255912‑M2/41‑100 (MQ=255)                                                        tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                        >  1:1629113‑M2/41‑100 (MQ=255)                                                         attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                       >  2:1841732‑M2/40‑100 (MQ=255)                                                          ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                      >  1:504615‑M2/39‑100 (MQ=255)                                                          ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                      <  1:860953‑M2/62‑1 (MQ=255)                                                           tattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                     <  2:1918606‑M2/63‑1 (MQ=255)                                                           tattaattccactgcctttggaaaaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                     <  2:1797367‑M2/63‑1 (MQ=255)                                                            attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                    <  1:2183799‑M2/64‑1 (MQ=255)                                                            attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                    <  1:2011338‑M2/64‑1 (MQ=255)                                                               aattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                 <  1:1764527‑M2/67‑1 (MQ=255)                                                                attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGc                                <  1:254162‑M2/68‑1 (MQ=255)                                                                attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGc                                <  1:1565286‑M2/68‑1 (MQ=255)                                                                 ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                               <  1:685454‑M2/69‑1 (MQ=255)                                                                 ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                               >  2:840003‑M2/32‑100 (MQ=255)                                                                  tccactgcttttagtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                              <  2:334712‑M2/70‑1 (MQ=255)                                                                  tccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                              <  2:1970993‑M2/70‑1 (MQ=255)                                                                   ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                             <  2:1606478‑M2/71‑1 (MQ=255)                                                                   ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                             >  1:484199‑M2/30‑100 (MQ=255)                                                                     actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                           <  2:1058592‑M2/73‑1 (MQ=255)                                                                      ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                          >  2:152195‑M2/27‑100 (MQ=255)                                                                       tgtctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                         <  1:630897‑M2/75‑1 (MQ=255)                                                                       tgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                         >  1:1984546‑M2/26‑100 (MQ=255)                                                                        gcctttgttagaggaaagtactaaATAATAATCAATTGTTAAATTATTATGCATTTAACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                         >  2:495698‑M2/25‑99 (MQ=255)                                                                        gcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCaa                        >  2:335611‑M2/25‑100 (MQ=255)                                                                          ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                      <  2:838354‑M2/78‑1 (MQ=255)                                                                           tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                     >  1:2040259‑M2/22‑100 (MQ=255)                                                                            ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtctc                    <  2:251332‑M2/80‑1 (MQ=255)                                                                                 agagtaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                 <  2:1622014‑M2/83‑1 (MQ=255)                                                                                 agaggaaagtgttaaATAATAATCAATAGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTATCCAATCTCTAttt               >  2:829553‑M2/16‑100 (MQ=255)                                                                                 agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt               <  1:2075041‑M2/85‑1 (MQ=255)                                                                                 agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt               >  2:1828403‑M2/16‑100 (MQ=255)                                                                                  gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg              >  1:2203310‑M2/15‑100 (MQ=255)                                                                                   aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTACTCAGAAAAGATAGACAAGCTTAGCCAATCtctatgtta             >  1:795881‑M2/14‑96 (MQ=255)                                                                                   aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCATAGCCAATCTCTATttg              <  2:2158917‑M2/86‑1 (MQ=255)                                                                                    ggaaagtgctaaATAATAATCACTTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat            >  2:1301822‑M2/13‑100 (MQ=255)                                                                                    ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat            <  2:2040245‑M2/88‑1 (MQ=255)                                                                                     gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat            <  1:335610‑M2/88‑1 (MQ=255)                                                                                      aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg          <  2:246212‑M2/90‑1 (MQ=255)                                                                                      aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg          <  1:472859‑M2/90‑1 (MQ=255)                                                                                      aaagtgctaaATAATAATCAATTGTTAAATGATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAGCTCTATttgattg          <  2:1479972‑M2/90‑1 (MQ=255)                                                                                         gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat       <  2:1530361‑M2/93‑1 (MQ=255)                                                                                         gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat       <  1:1373369‑M2/93‑1 (MQ=255)                                                                                         gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat       >  1:1442011‑M2/8‑100 (MQ=255)                                                                                          tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt      >  2:592311‑M2/7‑100 (MQ=255)                                                                                            ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCATAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga    <  2:1048202‑M2/96‑1 (MQ=255)                                                                                            ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga    >  1:64600‑M2/5‑100 (MQ=255)                                                                                            ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat       >  1:424218‑M2/5‑97 (MQ=255)                                                                                             taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa   >  2:958319‑M2/4‑100 (MQ=255)                                                                                             taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa   >  2:312434‑M2/4‑100 (MQ=255)                                                                                             taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa   >  2:312433‑M2/4‑100 (MQ=255)                                                                                              aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa  >  1:1630073‑M2/3‑100 (MQ=255)                                                                                              aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa  <  2:732522‑M2/98‑1 (MQ=255)                                                                                              aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa  >  2:591885‑M2/3‑100 (MQ=255)                                                                                                |                                                                                                  GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAA  >  NC_000913/1300603‑1300795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑