| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 163,135 | Δ95,041 bp | hokA–yhhJ | 83 genes hokA, cspA, yiaG, yiaF, ghrB, yiaD, bisC, yiaC, tag, yhjY, yhjX, eptB, ECDH1_RS00855, ECDH1_RS00860, dppA, ECDH1_RS00870, dppB, dppC, dppD, dppF, yhjV, ECDH1_RS00900, ldrD, bcsG, bcsF, bcsE, yhjR, ECDH1_RS00930, bcsA, bcsB, bcsZ, bcsC, yhjK, dctA, yhjJ, kdgK, ECDH1_RS00975, yhjH, yhjG, yhjE, yhjD, yhjC, yhjB, treF, yhjA, gadA, gadX, gadW, mdtF, mdtE, ECDH1_RS01045, gadE, hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1, ECDH1_RS01095, arsC, arsB, arsR, ECDH1_RS01115, ECDH1_RS01120, gor, rlmJ, prlC, rsmJ, tppB, uspA, uspB, pitA, yhiN, yhiM, ECDH1_RS01175, ECDH1_RS01180, ECDH1_RS01185, yhiJ, yhiI, rbbA, yhhJ |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 163135 | 258175 | 95041 | 602 [3] | [3] 605 | hokA–yhhJ | 83 genes hokA, cspA, yiaG, yiaF, ghrB, yiaD, bisC, yiaC, tag, yhjY, yhjX, eptB, ECDH1_RS00855, ECDH1_RS00860, dppA, ECDH1_RS00870, dppB, dppC, dppD, dppF, yhjV, ECDH1_RS00900, ldrD, bcsG, bcsF, bcsE, yhjR, ECDH1_RS00930, bcsA, bcsB, bcsZ, bcsC, yhjK, dctA, yhjJ, kdgK, ECDH1_RS00975, yhjH, yhjG, yhjE, yhjD, yhjC, yhjB, treF, yhjA, gadA, gadX, gadW, mdtF, mdtE, ECDH1_RS01045, gadE, hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1, ECDH1_RS01095, arsC, arsB, arsR, ECDH1_RS01115, ECDH1_RS01120, gor, rlmJ, prlC, rsmJ, tppB, uspA, uspB, pitA, yhiN, yhiM, ECDH1_RS01175, ECDH1_RS01180, ECDH1_RS01185, yhiJ, yhiI, rbbA, yhhJ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 163134 | 3 (0.010) | 590 (1.190) | 252/298 | 0.0 | 99.5% | intergenic (‑51/‑29) | insJ/hokA | transposase/protein HokA |
| ? | DH1 | 258176 = | 3 (0.010) | intergenic (+92/+73) | yhhJ/yhhI | inner membrane transport permease YhhJ/H repeat‑associated protein yhhI | |||||
Only 100 of 605 total aligned reads displayed.
GCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAAATACAATTGCCCGATGCGTAAGCTTATAGGGACTACGCATCGGTGCAATTTATTGAATTTTAGTTGTTTTTAGGCCGGATAAGGCGTTTATGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTAA > DH1/258026‑258326 | accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactg > 4:1633167‑M2/151‑151 (MQ=255) aacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactgaactg > 6:1201312‑M2/146‑151 (MQ=255) gccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGCcccc > 2:1294378‑M2/141‑151 (MQ=255) gagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCaa < 8:855338‑M2/14‑1 (MQ=255) gagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCa > 6:886186‑M2/138‑150 (MQ=255) agatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCaa > 3:1133849‑M2/137‑150 (MQ=255) gatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCaaaa < 5:110330‑M2/16‑1 (MQ=255) atgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAAc < 8:1960172‑M2/17‑1 (MQ=255) tgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAAcc > 7:1905556‑M2/134‑151 (MQ=255) atcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTg > 4:19099‑M2/132‑151 (MQ=255) cctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTgg > 5:565007‑M2/130‑150 (MQ=255) cctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTgg < 5:424418‑M2/21‑1 (MQ=255) gtaaccatcatcagttgtgaagtagtgattcatgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAg < 2:583770‑M2/25‑1 (MQ=255) gtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACACCCAAAACCTGGACAg < 6:1399427‑M2/25‑1 (MQ=255) taaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacataatGAACTGACCCCCAAAACCTTGACAGt > 7:1113842‑M2/126‑151 (MQ=255) ccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc < 4:946157‑M2/29‑1 (MQ=255) catcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc > 3:247544‑M2/122‑150 (MQ=255) atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattctatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc > 3:905537‑M2/121‑149 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGtt < 1:940114‑M2/33‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTa < 8:1598477‑M2/34‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTa < 1:17983‑M2/34‑1 (MQ=255) agttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAAcc > 7:610325‑M2/115‑151 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGc > 3:1700051‑M2/112‑151 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCttt > 5:117146‑M2/109‑151 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCttt < 2:1930012‑M2/43‑1 (MQ=255) tagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTg > 3:586989‑M2/105‑150 (MQ=255) gtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGAt > 2:1203461‑M2/103‑150 (MQ=255) gtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATa < 4:366652‑M2/49‑1 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTc > 5:279774‑M2/100‑151 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTc < 7:226502‑M2/52‑1 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTc < 8:505125‑M2/52‑1 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgcttgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGATTTTTGATACTc > 8:1103036‑M2/100‑151 (MQ=255) tcaggaattcaaggcgcttttcaatagggtatttttgctttgacatattaggggctattccatttcatcgtcgaacaaaatgggtgcagtacatactGAAGTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCa < 1:824321‑M2/53‑1 (MQ=255) gacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGCCAGTTTCAGTTAACCGGCTTTTTGATACACAGTCCt > 5:1494652‑M2/94‑151 (MQ=255) gacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCt < 1:476638‑M2/58‑1 (MQ=255) gacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCt > 5:1714803‑M2/94‑151 (MQ=255) acttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTg > 7:1383193‑M2/93‑151 (MQ=255) ttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGt > 6:1730741‑M2/91‑150 (MQ=255) tcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTAt > 4:1502233‑M2/90‑151 (MQ=255) caaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTAtt > 7:880443‑M2/89‑151 (MQ=255) aaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTc < 4:58106‑M2/64‑1 (MQ=255) cgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAggg < 5:669288‑M2/68‑1 (MQ=255) cgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAggg > 6:302447‑M2/84‑151 (MQ=255) ttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCa > 3:1477429‑M2/81‑150 (MQ=255) tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCATTTTGATACTCAGTCCTGTATTCAGGCCa > 2:1672252‑M2/78‑147 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGAtt > 4:473236‑M2/77‑151 (MQ=255) aaatggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTAc < 7:1607701‑M2/77‑1 (MQ=255) agggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACg > 2:830364‑M2/73‑150 (MQ=255) gggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGaa < 1:1284677‑M2/80‑1 (MQ=255) ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGaaa < 7:338199‑M2/81‑1 (MQ=255) tattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGc > 1:1398303‑M2/69‑151 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTcccc > 4:1959756‑M2/60‑151 (MQ=255) ttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTcccc < 1:1879530‑M2/92‑1 (MQ=255) ttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTcccc < 2:985549‑M2/92‑1 (MQ=255) tgaaatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacataatGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCACGCTCCCCGc > 3:1339174‑M2/58‑151 (MQ=255) gacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGc > 7:467652‑M2/57‑150 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGcac < 1:100068‑M2/96‑2 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAgg > 3:37136‑M2/54‑151 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACt < 8:801064‑M2/101‑1 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTg > 6:1061610‑M2/50‑151 (MQ=255) agtggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGGTCCCCGCAAGGACTGa < 2:1382158‑M2/103‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCCAGGACTGACGcc > 4:115595‑M2/44‑150 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGcc > 4:1340670‑M2/43‑149 (MQ=255) attccatttcatcggccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGa < 6:438031‑M2/110‑1 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGAt > 8:1466704‑M2/40‑150 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGt > 8:340388‑M2/38‑151 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGtt > 5:751659‑M2/37‑151 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGtt > 5:367536‑M2/37‑151 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGtt > 3:499998‑M2/37‑151 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGttt < 7:1301013‑M2/116‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGttt < 4:811744‑M2/116‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCt > 4:1001482‑M2/34‑151 (MQ=255) tcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCt > 3:675850‑M2/34‑151 (MQ=255) catcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTg > 8:1246072‑M2/33‑151 (MQ=255) catcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTg < 7:1735860‑M2/119‑1 (MQ=255) gtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCa < 2:1060572‑M2/123‑1 (MQ=255) tccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCAt > 8:1310814‑M2/28‑151 (MQ=255) ccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATg < 5:1884545‑M2/125‑1 (MQ=255) ccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATg > 2:66615‑M2/27‑151 (MQ=255) ccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATg > 2:495046‑M2/27‑151 (MQ=255) caacaaaattggtgcattacattctTAACTTTCCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATgg < 8:1706699‑M2/126‑1 (MQ=255) acaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGgct > 6:1842392‑M2/24‑151 (MQ=255) caaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGgctg < 1:1610134‑M2/129‑1 (MQ=255) caaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGgctg < 3:1194822‑M2/129‑1 (MQ=255) aatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCtt > 6:1604745‑M2/20‑151 (MQ=255) gggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCtttt < 8:644382‑M2/134‑1 (MQ=255) cagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCtttt < 5:1003722‑M2/134‑1 (MQ=255) gtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCtt > 4:1747671‑M2/10‑151 (MQ=255) acatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGATTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTAc < 5:1989515‑M2/144‑1 (MQ=255) acatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTa < 3:1258240‑M2/143‑1 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 7:712628‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 4:281971‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 7:101394‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 6:663166‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 5:1340919‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 2:1880632‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 5:17899‑M2/5‑151 (MQ=255) actGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc < 2:358239‑M2/147‑1 (MQ=255) ctGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATAGTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt > 5:954422‑M2/3‑151 (MQ=255) gAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTa < 8:1004270/150‑1 (MQ=255) | GCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAAATACAATTGCCCGATGCGTAAGCTTATAGGGACTACGCATCGGTGCAATTTATTGAATTTTAGTTGTTTTTAGGCCGGATAAGGCGTTTATGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTAA > DH1/258026‑258326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |