Predicted mutation
evidence seq id position mutation annotation gene description
JC JC DH1 225,117 Δ1 bp :: repeat_region (–) +9 bp :: Δ4 bp coding (273‑281/528 nt) gadE ← transcriptional regulator GadE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 225117 =1 (0.000)406 (1.080) 209/300 0.0 99.7% coding (281/528 nt) gadE transcriptional regulator GadE
?DH1 299568 = NA (NA)noncoding (5/773 nt) repeat_region repeat region
* ? DH1 = 2251251 (0.000)443 (1.180) 221/300 0.0 99.8% coding (273/528 nt) gadE transcriptional regulator GadE
?DH1 = 300335 NA (NA)noncoding (772/773 nt) repeat_region repeat region

Only 100 of 842 total aligned reads displayed.

TGCGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCAATG  >  DH1/224967‑225266
                                                                                                                                                      |                                                                                                                                                     
 gaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccct                                                                                                                                                      <  6:934598‑M1/2‑1 (MQ=255)
   gAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActtt                                                                                                                                                    >  3:679850/1‑151 (MQ=255)
    ttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccctttc                                                                                                                                                   <  1:1351515‑M1/5‑1 (MQ=255)
    aaaTATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActttc                                                                                                                                                   >  8:1183340/1‑151 (MQ=255)
    aaaTATTGAGCGTCGACGTGATATTGCTTTCATTTATATTTTTCAGAATCAGTTCCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActttc                                                                                                                                                   <  2:867719/151‑1 (MQ=255)
      gagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccctttct                                                                                                                                                  >  1:1015313‑M1/145‑150 (MQ=255)
      atatTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActttctt                                                                                                                                                 <  5:1145554/151‑1 (MQ=255)
       agcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccctttcttt                                                                                                                                                >  2:68899‑M1/144‑151 (MQ=255)
        atTGAGCGTCGACGTTATCTTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActttcttt                                                                                                                                                <  8:816253/150‑1 (MQ=255)
          tGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGgg                                                                                                                                             >  8:885984‑M1/1‑149 (MQ=255)
          tGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGgg                                                                                                                                             >  2:1187353‑M1/1‑149 (MQ=255)
             ataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattagcCTTTCTTTGCGGCt                                                                                                                                          <  7:948068‑M1/14‑1 (MQ=255)
                acctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAAc                                                                                                                                       >  4:160829‑M1/135‑151 (MQ=255)
                 cGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgct                                                                                                                                      >  7:26904‑M1/1‑142 (MQ=255)
                    gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACaaa                                                                                                                                    <  4:1085184‑M1/20‑1 (MQ=255)
                       gATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaac                                                                                                                                >  7:508638‑M1/1‑136 (MQ=255)
                       gATATTGCTTTCATTTTTATTTTTAAGAATCAGTTGCATAATTTTGAAATGATTATGTGAAAAACATAATTGTGAATTCTTATCGGGCAAGTGTTTACCATAAGTAATATCAAGAAGATTTTTGATACTTTATTTGggtgatgatgacaa                                                                                                                                 >  7:722946‑M1/1‑136 (MQ=255)
                        ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTCGCGGCTAACAaaataa                                                                                                                                <  1:344603‑M1/24‑1 (MQ=255)
                        atatTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaact                                                                                                                               >  3:791833‑M1/1‑135 (MQ=255)
                          gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAaaataaa                                                                                                                               >  7:13337‑M1/125‑149 (MQ=255)
                          atTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaactt                                                                                                                              <  3:235387‑M1/150‑18 (MQ=255)
                           aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAaaataaat                                                                                                                              <  4:296845‑M1/26‑1 (MQ=255)
                             gCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttact                                                                                                                           <  4:135842‑M1/150‑21 (MQ=255)
                              cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGgcg                                                                                                                         <  5:442973‑M1/31‑1 (MQ=255)
                              cTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactg                                                                                                                          >  8:1364189‑M1/1‑129 (MQ=255)
                                 cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCtt                                                                                                                      <  1:1440926‑M1/34‑1 (MQ=255)
                                  cATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGTTTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgcttccaacttactgattta                                                                                                                     <  8:1085282‑M1/151‑27 (MQ=255)
                                  cATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTGTTTGggtgatgctgccaacttactgattt                                                                                                                      >  8:482782‑M1/1‑125 (MQ=255)
                                  acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCttt                                                                                                                     <  7:1075611‑M1/35‑1 (MQ=255)
                                   cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTa                                                                                                                    >  2:227494‑M1/116‑151 (MQ=255)
                                    tttttatttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGACACTTTCTTTGggtgatgctgccaacttactgatttagt                                                                                                                   >  3:1375894‑M1/1‑123 (MQ=255)
                                      tttatttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtg                                                                                                                  <  2:348054‑M1/150‑30 (MQ=255)
                                            tttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                           >  5:755977‑M1/1‑115 (MQ=255)
                                             ttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                          >  4:407589‑M1/1‑114 (MQ=255)
                                              tgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGttt                                                                                                         <  6:428708‑M1/47‑1 (MQ=255)
                                               gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGttt                                                                                                         >  1:994869‑M1/104‑150 (MQ=255)
                                                 gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACt                                                                                                      >  4:522600‑M1/102‑151 (MQ=255)
                                                  aaTCAGTTGCATAATTTTGAGCTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                      <  6:1348635‑M1/150‑42 (MQ=255)
                                                   aTCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                    >  1:227496‑M1/1‑108 (MQ=255)
                                                      aGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                                                                 <  8:184682‑M1/151‑47 (MQ=255)
                                                      aGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                  >  5:878917‑M1/1‑105 (MQ=255)
                                                      aGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                  >  8:607262‑M1/1‑105 (MQ=255)
                                                       gTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                  >  7:630514‑M1/1‑104 (MQ=255)
                                                            aTAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                           >  5:1170533‑M1/1‑99 (MQ=255)
                                                               aTTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                                                        <  7:150360‑M1/151‑56 (MQ=255)
                                                                ttttGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                         >  4:849315‑M1/1‑95 (MQ=255)
                                                                 gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGcc                                                                                      <  3:850744‑M1/66‑1 (MQ=255)
                                                                   tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCa                                                                                     <  5:1395989‑M1/67‑1 (MQ=255)
                                                                      aCTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgtctt                                                                                 >  6:1065327‑M1/1‑89 (MQ=255)
                                                                      aCTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                 >  3:971077‑M1/1‑89 (MQ=255)
                                                                      aCTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                 <  7:1182201‑M1/151‑63 (MQ=255)
                                                                          aTTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                             >  2:1418068‑M1/1‑85 (MQ=255)
                                                                           ttATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                                                            >  8:436528‑M1/1‑84 (MQ=255)
                                                                            tATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                           >  3:474238‑M1/1‑83 (MQ=255)
                                                                             aTGTGATAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                           <  4:219340‑M1/150‑69 (MQ=255)
                                                                               tggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATtct                                                                        <  1:1070698‑M1/80‑1 (MQ=255)
                                                                                ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATtctc                                                                       >  5:279926‑M1/71‑151 (MQ=255)
                                                                                  agctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATtctctc                                                                     <  7:857396‑M1/83‑1 (MQ=255)
                                                                                     aaCATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                                                                  >  5:954186‑M1/1‑74 (MQ=255)
                                                                                      gcatgacaaagtcatcgggcattatctcaacataaaacaatatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATATATTGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGc                                                                  >  6:1137530‑M1/65‑150 (MQ=255)
                                                                                       cATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggggtctgtttctatcagctgg                                                                >  4:1028762‑M1/1‑72 (MQ=255)
                                                                                          gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCt                                                              <  2:468746‑M1/90‑1 (MQ=255)
                                                                                          aaTTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                              <  1:758360‑M1/150‑82 (MQ=255)
                                                                                           acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTaa                                                            >  6:680668‑M1/60‑151 (MQ=255)
                                                                                             tgtgAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                           <  2:932462‑M1/150‑85 (MQ=255)
                                                                                                  catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTtctc                                                      >  2:1086565‑M1/53‑150 (MQ=255)
                                                                                                  aTTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                     >  6:847790‑M1/1‑61 (MQ=255)
                                                                                                     cTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccagcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                  >  7:772662‑M1/1‑58 (MQ=255)
                                                                                                     cTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                  >  3:1325054‑M1/1‑58 (MQ=255)
                                                                                                       tATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                  <  6:262136‑M1/149‑94 (MQ=255)
                                                                                                       tATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag                                                   <  3:1072921‑M1/148‑93 (MQ=255)
                                                                                                        aTGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                               <  1:258012‑M1/151‑97 (MQ=255)
                                                                                                           gggCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga                                            <  1:913479‑M1/151‑100 (MQ=255)
                                                                                                            tatctgaacataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTa                                            <  2:820666‑M1/108‑1 (MQ=255)
                                                                                                            ggCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                           <  3:16835‑M1/151‑101 (MQ=255)
                                                                                                               aaGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggg                                        >  4:723263‑M1/1‑48 (MQ=255)
                                                                                                                  tgtTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctataagctgtccctcctgttcagctaatgacggggtg                                     >  7:578407‑M1/1‑45 (MQ=255)
                                                                                                                    cataaaacactatcaataagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGcttct                                   <  6:1424726‑M1/117‑1 (MQ=255)
                                                                                                                         cATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaccttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                               >  6:1237106‑M1/1‑38 (MQ=255)
                                                                                                                           tAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac                            >  4:971288‑M1/1‑36 (MQ=255)
                                                                                                                             aGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                          <  1:1183246‑M1/151‑118 (MQ=255)
                                                                                                                                aaTCTCAAGAAGATTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggca                        <  8:1243309‑M1/150‑120 (MQ=255)
                                                                                                                                    taagttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGTATATGAt                   <  3:1192012‑M1/133‑1 (MQ=255)
                                                                                                                                      agttggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATtg                 >  1:690552‑M1/17‑151 (MQ=255)
                                                                                                                                       agaagaTTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                <  8:705952‑M1/151‑128 (MQ=255)
                                                                                                                                         tggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATtgtg               >  5:1279654‑M1/14‑150 (MQ=255)
                                                                                                                                         tggagtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATtgtg               <  4:634145‑M1/137‑1 (MQ=255)
                                                                                                                                            agtcattaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAg           >  8:345254‑M1/11‑151 (MQ=255)
                                                                                                                                            aTTTTTGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg           >  5:1439719‑M1/1‑19 (MQ=255)
                                                                                                                                              ttttGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac         >  3:551847‑M1/1‑17 (MQ=255)
                                                                                                                                              ttttGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac         >  2:1286355‑M1/1‑17 (MQ=255)
                                                                                                                                                ttGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatccgctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat       >  4:1197751‑M1/1‑15 (MQ=255)
                                                                                                                                                ttGATACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat       >  6:541058‑M1/1‑15 (MQ=255)
                                                                                                                                                attaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTAt       >  7:347346‑M1/7‑151 (MQ=255)
                                                                                                                                                  taccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATc      <  1:451002‑M1/146‑1 (MQ=255)
                                                                                                                                                   accCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCa     <  2:602538‑M1/147‑1 (MQ=255)
                                                                                                                                                   aTACTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc      >  6:183192‑M1/1‑12 (MQ=255)
                                                                                                                                                     aCTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg  <  2:1033987‑M1/151‑142 (MQ=255)
                                                                                                                                                     aCTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg  >  1:584494‑M1/1‑10 (MQ=255)
                                                                                                                                                     aCTTTCTTTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc   <  3:355589‑M1/150‑141 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TGCGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCAATG  >  DH1/224967‑225266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.