BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	DH1	2,201,912	Δ3,035 bp		[pntA]–tqsA	[pntA], pntB, tqsA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	DH1	2201912	2204946	3035	448 [206]	[243] 486	[pntA]–tqsA	[pntA], pntB, tqsA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	DH1	= 2201911	205 (0.400)	242 (0.470)	163/300	2.1	66.2%	coding (1337/1533 nt)	pntA	NAD(P) transhydrogenase subunit alpha
*	?	DH1	2204947 =	42 (0.080)	242 (0.470)	163/300	2.1	66.2%	intergenic (‑382/‑30)	tqsA/mdtJ	AI‑2 transporter TqsA/spermidine export protein MdtJ

Only 100 of 448 total aligned reads displayed.

CCTGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTGG  >  DH1/2201761‑2202061

  tGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCtt                                                                                                                                                      >  6:76660‑M1/1‑149 (MQ=255)

  tGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCtt                                                                                                                                                      >  4:87505‑M1/1‑149 (MQ=255)

  tGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCCTTGTCGGTTATTACGTGGTGTGGAATGTATCg                                                                                                                                                       >  4:682608/1‑150 (MQ=255)

   gCTCTCCGTGGCGTAAATACGCTTTGATGGCGCTGGCAATACTTCTTTTTGGCTGGCTGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGGCGTTTATTACGTGGTGTGGAATGTATCg                                                                                                                                                       <  4:1743624/149‑1 (MQ=255)

    cTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAc                                                                                                                                                    >  2:1058477/1‑151 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaa                                                                                                                                                  <  4:311931‑M1/151‑7 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaa                                                                                                                                                   <  1:312131‑M1/150‑6 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaa                                                                                                                                                    <  2:544629‑M1/149‑5 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAcgc                                                                                                                                                  >  7:1615139/1‑151 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAcg                                                                                                                                                   <  7:1427674/150‑1 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAcg                                                                                                                                                   <  1:445606/150‑1 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAcg                                                                                                                                                   <  1:831839/150‑1 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAc                                                                                                                                                    <  5:655489/149‑1 (MQ=255)

      cACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAc                                                                                                                                                    <  8:1769067/149‑1 (MQ=255)

        ccGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTTGATTGCAAGCGTTGCGCCGAAAGAATTCCTTTGGCACTTCACCGTTTTCGCGCTTGACTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCAcgctc                                                                                                                                                <  8:257771/151‑3 (MQ=255)

        ccGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaata                                                                                                                                                <  7:1895032‑M1/151‑9 (MQ=255)

         cGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCt                                                                                                                                               >  1:713365/1‑151 (MQ=255)

           tGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataatt                                                                                                                                             >  6:1311945‑M1/1‑140 (MQ=255)

               gTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATac                                                                                                                                         <  4:1089465/151‑1 (MQ=255)

                 aaaTACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttg                                                                                                                                       <  3:1355340‑M1/151‑18 (MQ=255)

                 aaaTACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttg                                                                                                                                       >  2:413488‑M1/1‑134 (MQ=255)

                  aaTACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTTGGCACTCCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACAcc                                                                                                                                      <  4:140237/151‑1 (MQ=255)

                     aCGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcagg                                                                                                                                   <  3:77327‑M1/151‑22 (MQ=255)

                     aCGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGtt                                                                                                                                   <  6:445042/151‑1 (MQ=255)

                      cgcgTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcagga                                                                                                                                  <  3:998873‑M1/151‑23 (MQ=255)

                         gTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggaga                                                                                                                                >  8:1135157‑M1/1‑126 (MQ=255)

                            gATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTc                                                                                                                             <  3:1739739/150‑1 (MQ=255)

                               ggCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACCTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggaca                                                                                                                          >  6:1627109‑M1/1‑120 (MQ=255)

                                     ggCAATCATTCTTTTTGGCTGGCTGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCGGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAAc                                                                                                                   <  8:1596475/151‑1 (MQ=255)

                                     ggCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCa                                                                                                                     <  6:1940232/149‑1 (MQ=255)

                                      gCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatat                                                                                                                  <  1:163079‑M1/151‑39 (MQ=255)

                                      gCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatat                                                                                                                  <  3:495681‑M1/151‑39 (MQ=255)

                                       cAATCATTCTTTTTGGGTGGATGGGAAGCGTTGCGCCGACAGAATTCCTTGGGCACTTCAGCGTTTTCGCGCTGGCGTGCGGTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcatgcaggagaaggacaatgtatatt                                                                                                                 <  1:1879199‑M1/151‑40 (MQ=255)

                                       cAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatt                                                                                                                 <  3:1459891‑M1/151‑40 (MQ=255)

                                       cAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatt                                                                                                                 >  8:69178‑M1/1‑112 (MQ=255)

                                       cAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAAcgc                                                                                                                 >  6:817502/1‑151 (MQ=255)

                                        aaTCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgctggagaaggacaatgtatattt                                                                                                                >  2:1836930‑M1/1‑111 (MQ=255)

                                         aTCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatattt                                                                                                                >  2:322119‑M1/1‑110 (MQ=255)

                                           cATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttatt                                                                                                             <  6:1248242‑M1/151‑44 (MQ=255)

                                           cATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttat                                                                                                              <  6:671223‑M1/150‑43 (MQ=255)

                                            aTTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattg                                                                                                            >  3:333462‑M1/1‑107 (MQ=255)

                                             ttCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTc                                                                                                           >  5:1767441/1‑151 (MQ=255)

                                              tCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTc                                                                                                           >  4:1628218/1‑150 (MQ=255)

                                                tttttGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggatt                                                                                                        >  8:928263‑M1/1‑103 (MQ=255)

                                                tttttGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggatt                                                                                                        >  1:18973‑M1/1‑103 (MQ=255)

                                                tctttggCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggatt                                                                                                        >  1:1000326‑M1/3‑103 (MQ=255)

                                                 ttttGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggat                                                                                                         <  6:94643‑M1/149‑48 (MQ=255)

                                                  tttGGGTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACAGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGAACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAggg                                                                                                       >  1:176637/1‑150 (MQ=255)

                                                  tttGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAggg                                                                                                       <  5:902143/150‑1 (MQ=255)

                                                        tGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattagg                                                                                                >  7:471566‑M1/1‑95 (MQ=255)

                                                         ggATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggt                                                                                               <  6:1862839‑M1/151‑58 (MQ=255)

                                                          gATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTAttgtt                                                                                              <  5:1977603/151‑1 (MQ=255)

                                                           agggcaAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattagggct                                                                                             <  6:1152259‑M1/149‑60 (MQ=255)

                                                             ggCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTc                                                                                           >  2:174390/1‑151 (MQ=255)

                                                               cAAGCGTTGCTCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCgg                                                                                         <  6:1413140/151‑1 (MQ=255)

                                                                aaGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCggc                                                                                        >  8:1225829/1‑150 (MQ=255)

                                                                aaGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCgg                                                                                         >  2:203864/1‑150 (MQ=255)

                                                                  gCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctatt                                                                                      <  1:1256238‑M1/151‑67 (MQ=255)

                                                                  gCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctatt                                                                                      <  3:1935587‑M1/151‑67 (MQ=255)

                                                                  gCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctatt                                                                                      <  2:1266864‑M1/151‑67 (MQ=255)

                                                                      tGCGCCGAAAGAATTCCTTGGGCACTTCGCCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTAAGTTGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTg                                                                                  >  2:742465/1‑151 (MQ=255)

                                                                      tGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgct                                                                                   >  3:853630‑M1/1‑81 (MQ=255)

                                                                       gcgcCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgcta                                                                                  <  8:342351‑M1/150‑71 (MQ=255)

                                                                          ccGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGc                                                                              <  7:203728/151‑1 (MQ=255)

                                                                             aaaGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaat                                                                           >  2:879046‑M1/1‑74 (MQ=255)

                                                                               aGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaatt                                                                          >  8:1368511‑M1/1‑72 (MQ=255)

                                                                                  aTTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGGGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccg                                                                      <  8:1970520‑M1/151‑83 (MQ=255)

                                                                                   ttCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagatatttccgg                                                                     >  2:1171684‑M1/1‑68 (MQ=255)

                                                                                    tCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGcc                                                                     >  3:1176550/1‑150 (MQ=255)

                                                                                         gggCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGggcg                                                               >  7:398539/1‑151 (MQ=255)

                                                                                         gggCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGggcg                                                               <  4:1259165/151‑1 (MQ=255)

                                                                                            cACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCt                                                            <  4:921226/151‑1 (MQ=255)

                                                                                            cACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCt                                                            <  7:643168/151‑1 (MQ=255)

                                                                                             ccTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTg                                                           <  6:289462/150‑1 (MQ=255)

                                                                                                  aCCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGtt                                                       >  5:12572/1‑150 (MQ=255)

                                                                                                   ccGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAg                                                     <  3:1591312/151‑1 (MQ=255)

                                                                                                     gTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTTGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCt                                                   <  7:951812/151‑1 (MQ=255)

                                                                                                     gTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatg                                                   >  2:1621011‑M1/1‑50 (MQ=255)

                                                                                                          cgcgCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcg                                               >  8:1651441‑M1/1‑45 (MQ=255)

                                                                                                             gcTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcg                                           <  6:144550‑M1/151‑110 (MQ=255)

                                                                                                              cTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGATGGGTTAGCTTCCTTAGtt                                          >  6:614688/1‑151 (MQ=255)

                                                                                                                ggCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGtt                                          <  5:1864629/149‑1 (MQ=255)

                                                                                                                   cTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtg                                     >  7:1080192‑M1/1‑36 (MQ=255)

                                                                                                                    tGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtg                                     >  2:1495553‑M1/1‑35 (MQ=255)

                                                                                                                     gCGTTGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtga                                    <  3:659192‑M1/150‑117 (MQ=255)

                                                                                                                         tGTCGGTTATTACGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtgaggga                                <  3:1004136‑M1/150‑121 (MQ=255)

                                                                                                                          gTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGGTAGCTTCCTTAGTTTTATCGCGGTg                               <  5:1205597/150‑1 (MQ=255)

                                                                                                                           gcGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCt                             <  5:1552902/150‑1 (MQ=255)

                                                                                                                            cGGTTATTACGTGGTGTGGAATGTTTCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtgagggaaat                             <  7:818601‑M1/150‑124 (MQ=255)

                                                                                                                            cGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCtt                            >  6:1771486/1‑151 (MQ=255)

                                                                                                                            cGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTGGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCCGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCtt                            >  4:490073/1‑151 (MQ=255)

                                                                                                                                tattaCGTGGTGTGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtgagggaaatggcg                         <  5:470771‑M1/150‑128 (MQ=255)

                                                                                                                                        ggtgTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGTGGTGCTTATAGCCAGCAtt                <  5:1392181/151‑1 (MQ=255)

                                                                                                                                        ggtgTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCAtt                >  7:1205543/1‑151 (MQ=255)

                                                                                                                                         gtgtGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtgagggaaatggcggctttatttt               <  8:466795‑M1/151‑138 (MQ=255)

                                                                                                                                         gtgtGGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaacggtacgatgtcaatgaaatgggcgagcttcagtgagggaaatggcggctttatttt               >  3:126599‑M1/1‑14 (MQ=255)

                                                                                                                                            tgGAATGTATCttaaaataattctcttgcaggagaaggacaatgtatatttattggattttattaggtctggctattgctacagaaattaccggtacgctgtcaatgaaatgggcgagcgtcagtgagggaaatggcggctttattttaat            >  4:1853822‑M1/1‑11 (MQ=255)

                                                                                                                                               aaTGTATCGCGCGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATAttt         >  8:567776/1‑151 (MQ=255)

                                                                                                                                                     tCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTg   >  1:590/1‑151 (MQ=255)

                                                                                                                                                      cGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTgg  <  1:1356071/151‑1 (MQ=255)

CCTGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTGG  >  DH1/2201761‑2202061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`