Predicted mutation
evidence seq id position mutation annotation gene description
MC JC DH1 2,201,912 Δ3,035 bp [pntA]–tqsA [pntA], pntB, tqsA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ DH1 2201912 2204946 3035 448 [206] [243] 486 [pntA]–tqsA [pntA], pntB, tqsA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 2201911205 (0.400)242 (0.470) 163/300 2.1 66.2% coding (1337/1533 nt) pntA NAD(P) transhydrogenase subunit alpha
?DH1 2204947 = 42 (0.080)intergenic (‑382/‑30) tqsA/mdtJ AI‑2 transporter TqsA/spermidine export protein MdtJ

Only 100 of 486 total aligned reads displayed.

TACATTTACCCATCTTCGTACCTCATCCACTATCTTGCTCGTAGGTGAGCAGCACTGGCGCAACGCGCTTTAGTCCTTTCTTCTGCCAAAGCTTGCGCTATGCGCGGGGCTTGACCACTTTACTTTGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGTGATG  >  DH1/2204798‑2205096
                                                                                                                                                     |                                                                                                                                                     
tgctcaccgtggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatctt                                                                                                                                                      >  4:87505‑M2/150‑151 (MQ=255)
 gctcaccgtggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTa                                                                                                                                                     <  3:1602959‑M2/3‑1 (MQ=255)
 aagctatgatacaaatcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAAtt                                                                                                                                                      <  2:1594063‑M2/25‑1 (MQ=255)
    caccgtggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTaaaa                                                                                                                                                  <  4:311931‑M2/6‑1 (MQ=255)
     accgtggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAaat                                                                                                                                                 <  2:1807936‑M2/7‑1 (MQ=255)
        gtggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAaataat                                                                                                                                              >  7:515952‑M2/142‑151 (MQ=255)
        gatacaaatcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAaataat                                                                                                                                              <  3:1776028‑M2/33‑1 (MQ=255)
         atacaaatcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAAtt                                                                                                                                             >  6:728116‑M2/118‑151 (MQ=255)
          ggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAAtt                                                                                                                                             <  8:1630252‑M2/11‑1 (MQ=255)
          ggcgtaaatacgcgttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATtc                                                                                                                                            <  3:621534‑M2/12‑1 (MQ=255)
           acaaatcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATtc                                                                                                                                            <  4:202701‑M2/35‑1 (MQ=255)
             aaatcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTctct                                                                                                                                         >  1:1202496‑M2/114‑151 (MQ=255)
               atcaggcgtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTg                                                                                                                                       >  2:201438‑M2/112‑151 (MQ=255)
               atcaggcgtgttcaactaccgaggacaattatcatcagcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAATCGAAAAATAAaataattatatt                                                                                                                                        >  2:810480‑M2/112‑145 (MQ=255)
                      gtgttcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAgg                                                                                                                                   >  3:1086700‑M2/105‑148 (MQ=255)
                        ttgatggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGgaga                                                                                                                                >  7:1530178‑M2/126‑149 (MQ=255)
                         tgatggcgctggcaatcattctttttggctggatggcaagcgttacgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAgg                                                                                                                             >  1:888359‑M2/125‑151 (MQ=255)
                          tcaactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAgg                                                                                                                             <  6:1785672‑M2/50‑1 (MQ=255)
                          gctggcgctggcaatcattctttttggctggctggcaagcgttgcgccgaacgaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAgg                                                                                                                             <  4:1094735‑M2/27‑1 (MQ=255)
                            tggcgctggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGAc                                                                                                                           >  7:340915‑M2/122‑150 (MQ=255)
                            aactaccgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACa                                                                                                                          <  8:838970‑M2/53‑1 (MQ=255)
                                accgaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATg                                                                                                                       <  2:1383523‑M2/56‑1 (MQ=255)
                                   ggcaatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGtat                                                                                                                    >  3:818013‑M2/115‑150 (MQ=255)
                                   gaggacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGtat                                                                                                                    >  8:324521‑M2/92‑150 (MQ=255)
                                     caatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttctcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTAtatt                                                                                                                 >  2:630704‑M2/113‑151 (MQ=255)
                                      gacaattatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTAtattt                                                                                                                <  1:25812‑M2/63‑1 (MQ=255)
                                      aatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTAtattt                                                                                                                <  1:1276885‑M2/40‑1 (MQ=255)
                                      aatcattctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTAtattt                                                                                                                <  1:707159‑M2/40‑1 (MQ=255)
                                          attctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTg                                                                                                            >  5:1833183‑M2/108‑151 (MQ=255)
                                           ttctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTgg                                                                                                           >  6:871513‑M2/107‑151 (MQ=255)
                                           ttctttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATATATTgg                                                                                                           >  6:332593‑M2/107‑151 (MQ=255)
                                           ttatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTgg                                                                                                           >  5:2008844‑M2/84‑151 (MQ=255)
                                            tatcatccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTgg                                                                                                           >  6:1224296‑M2/83‑150 (MQ=255)
                                              tctttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGAtt                                                                                                        >  1:1000326‑M2/104‑151 (MQ=255)
                                               ttttggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGa                                                                                                          <  5:1623583‑M2/46‑1 (MQ=255)
                                                  ccgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTtta                                                                                                     <  7:1006802‑M2/74‑1 (MQ=255)
                                                   ggctggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTttatt                                                                                                   <  2:444102‑M2/53‑1 (MQ=255)
                                                   cgcgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTttatt                                                                                                   <  5:85106‑M2/76‑1 (MQ=255)
                                                     cgatgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAg                                                                                                 <  4:731645‑M2/78‑1 (MQ=255)
                                                       ggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGt                                                                                               <  6:1862839‑M2/57‑1 (MQ=255)
                                                       ggatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGt                                                                                               <  1:558943‑M2/57‑1 (MQ=255)
                                                       atgacgagaagcaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGt                                                                                               >  7:702327‑M2/72‑151 (MQ=255)
                                                        gatggcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGt                                                                                               >  4:1176810‑M2/94‑150 (MQ=255)
                                                          acgagaaggaacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTg                                                                                            <  6:1299633‑M2/83‑1 (MQ=255)
                                                            gcaagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGc                                                                                          >  8:1712185‑M2/90‑151 (MQ=255)
                                                             caagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgcttgcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCt                                                                                         <  3:486075‑M2/63‑1 (MQ=255)
                                                              aagcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCt                                                                                         >  4:1542152‑M2/88‑150 (MQ=255)
                                                               agcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTAt                                                                                       <  5:185996‑M2/65‑1 (MQ=255)
                                                                gcgttgcgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTAtt                                                                                      <  3:1935587‑M2/66‑1 (MQ=255)
                                                                  caacactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGc                                                                                    <  1:1830284‑M2/91‑1 (MQ=255)
                                                                    acactgcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTa                                                                                  <  2:568757‑M2/93‑1 (MQ=255)
                                                                      cgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTAc                                                                                 >  6:1168302‑M2/80‑150 (MQ=255)
                                                                      cgccgaaagaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTAc                                                                                 >  6:482536‑M2/80‑150 (MQ=255)
                                                                      agtgaggatatttgtaatattatggacaatttgttcaggtcgttattttcttctttGGTTTCTCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTTGATTTTATTAGGTCTGGCTATTGctaga                                                                                <  4:1046460‑M2/95‑3 (MQ=255)
                                                                         gcggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAg                                                                               <  4:95068‑M2/96‑1 (MQ=255)
                                                                          cggataattgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGaa                                                                             >  1:1438837‑M2/53‑150 (MQ=255)
                                                                             agaattccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAAtt                                                                          >  8:1368511‑M2/73‑150 (MQ=255)
                                                                                attgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCg                                                                      <  7:905854‑M2/105‑1 (MQ=255)
                                                                                attccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCg                                                                      >  3:323314‑M2/70‑151 (MQ=255)
                                                                                  tgtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGt                                                                    >  3:1228210‑M2/45‑151 (MQ=255)
                                                                                   gtaatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGt                                                                    <  1:346333‑M2/107‑1 (MQ=255)
                                                                                   ccttgggcacttcaccgttttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGt                                                                    >  5:1446152‑M2/67‑150 (MQ=255)
                                                                                     aatattatggacaatttgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACg                                                                 >  6:389481‑M2/42‑151 (MQ=255)
                                                                                             ggacaatttgttcaggacgttattttctagattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAAt                                                         <  5:1320347‑M2/118‑1 (MQ=255)
                                                                                                     tgttcaggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATgg                                                  <  8:1943905‑M2/125‑1 (MQ=255)
                                                                                                      ttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATggg                                                 <  6:246612‑M2/103‑1 (MQ=255)
                                                                                                      ttcgcgctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGc                                                >  4:452744‑M2/48‑151 (MQ=255)
                                                                                                          aggacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGc                                            >  6:944124‑M2/21‑151 (MQ=255)
                                                                                                           gctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCg                                           <  6:144550‑M2/109‑1 (MQ=255)
                                                                                                            gacgttattttctacattGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGt                                          <  5:719258‑M2/133‑1 (MQ=255)
                                                                                                            ctggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGt                                          >  6:1403832‑M2/42‑151 (MQ=255)
                                                                                                             tggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTc                                         >  2:1238820‑M2/41‑151 (MQ=255)
                                                                                                              ggcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAATTAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTc                                         >  1:1722960‑M2/40‑150 (MQ=255)
                                                                                                               gcctgcgttgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTc                                         >  5:1072224‑M2/39‑149 (MQ=255)
                                                                                                                       tgtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGa                                <  3:1004136‑M2/120‑1 (MQ=255)
                                                                                                                        gtnggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGaa                               <  1:1890271‑M2/121‑1 (MQ=255)
                                                                                                                        gtcggttattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGaa                               <  7:1267187‑M2/121‑1 (MQ=255)
                                                                                                                           attGGTTTAGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTATGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATgg                           <  8:684874‑M2/148‑1 (MQ=255)
                                                                                                                              tattacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATggcg                         <  5:470771‑M2/127‑1 (MQ=255)
                                                                                                                               ggttCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATggcggc                       <  8:1250732/149‑1 (MQ=255)
                                                                                                                               attacgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATggcggc                       >  6:653309‑M2/23‑151 (MQ=255)
                                                                                                                                 ttagCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCt                      <  4:1364784/147‑1 (MQ=255)
                                                                                                                                 ttCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCtt                     >  3:1390454/1‑151 (MQ=255)
                                                                                                                                  acgtggtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCtt                     <  2:887359‑M2/131‑1 (MQ=255)
                                                                                                                                     cTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTAtt                 >  2:361758/1‑151 (MQ=255)
                                                                                                                                       gtgtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTAtttt               <  8:466795‑M2/137‑1 (MQ=255)
                                                                                                                                         gtggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTa              <  3:749667‑M2/138‑1 (MQ=255)
                                                                                                                                          ttAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAAt            >  7:181461/1‑151 (MQ=255)
                                                                                                                                          gggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAAt            <  6:1599391‑M2/140‑1 (MQ=255)
                                                                                                                                           tAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAAt            <  7:249987/150‑1 (MQ=255)
                                                                                                                                           ggaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATg           >  2:1067599‑M2/11‑151 (MQ=255)
                                                                                                                                            gaatgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACAGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGc          >  4:1777227‑M2/10‑151 (MQ=255)
                                                                                                                                             aGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCt         >  7:1929198/1‑151 (MQ=255)
                                                                                                                                              gCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTg        <  3:1334528/151‑1 (MQ=255)
                                                                                                                                              atgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTg        >  8:1084366‑M2/8‑151 (MQ=255)
                                                                                                                                              atgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTg        <  3:1266562‑M2/144‑1 (MQ=255)
                                                                                                                                               tgtatcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTgg       >  3:153939‑M2/7‑151 (MQ=255)
                                                                                                                                                   tcTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGtgat   >  2:1645278‑M2/3‑151 (MQ=255)
                                                                                                                                                   aaTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGtgat   <  4:1227164/151‑1 (MQ=255)
                                                                                                                                                    aTTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGGTTTATTTTAATGCTGGtgatg  >  5:1681874/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TACATTTACCCATCTTCGTACCTCATCCACTATCTTGCTCGTAGGTGAGCAGCACTGGCGCAACGCGCTTTAGTCCTTTCTTCTGCCAAAGCTTGCGCTATGCGCGGGGCTTGACCACTTTACTTTGGTTTCGCTGAATTAAGCGAAAATTAAAATAATTCTCTTGCAGGAGAAGGACAATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGTGATG  >  DH1/2204798‑2205096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑