BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	317 [1]	[0] 317	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	1 (0.000)	311 (0.570)	190/296	1.1	99.8%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	311 (0.570)	190/296	1.1	99.8%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 317 total aligned reads displayed.

CCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGT  >  NC_000913/1673407‑1673705

ccATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAt                                                                                                                                                      >  6:419739‑M1/1‑150 (MQ=255)

 cATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtt                                                                                                                                                     >  3:216609‑M1/1‑149 (MQ=255)

  aTTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgt                                                                                                                                                    >  4:1821619‑M1/1‑148 (MQ=255)

   tttCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTATGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACAAAtgt                                                                                                                                                    >  1:482182‑M1/1‑147 (MQ=255)

    ttCCCTCACTGAAGCTGGCACATTTCATTGACAGAGTACCGGTAATTTCTGTAGCAATAGCCAGACCTATTAAAATCCAATAAATATACATTGTACTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgta                                                                                                                                                   <  1:1883047‑M1/150‑5 (MQ=255)

     tCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgt                                                                                                                                                    >  7:1310208‑M1/1‑145 (MQ=255)

     tCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCATTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTAAGCGAAACCAAtgt                                                                                                                                                    >  6:1528188‑M1/1‑145 (MQ=255)

         tCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaat                                                                                                                                             >  7:838278‑M1/1‑141 (MQ=255)

          cACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaa                                                                                                                                              <  1:872362‑M1/149‑10 (MQ=255)

             tGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacg                                                                                                                                         >  3:1480678‑M1/1‑137 (MQ=255)

              gACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataac                                                                                                                                          <  2:8038‑M1/149‑14 (MQ=255)

              gACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataac                                                                                                                                          <  5:1719653‑M1/149‑14 (MQ=255)

               aCGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtc                                                                                                                                       >  4:2150012‑M1/1‑135 (MQ=255)

                    cGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTATCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaa                                                                                                                                  <  1:146396‑M1/151‑22 (MQ=255)

                     gCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaac                                                                                                                                 >  1:1486222‑M1/1‑129 (MQ=255)

                      cccATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaaca                                                                                                                                <  1:1358357‑M1/151‑24 (MQ=255)

                        cATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAGtgtagaaaataacgtcctgaacaa                                                                                                                               >  3:1800037‑M1/1‑126 (MQ=255)

                            tCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattg                                                                                                                           <  2:1508294‑M1/150‑29 (MQ=255)

                              aTTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcc                                                                                                                        <  6:1833722‑M1/151‑32 (MQ=255)

                              aTTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcc                                                                                                                        >  2:2007567‑M1/1‑120 (MQ=255)

                              aTTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGATTAATTCAGAGAAACCAAtgtagaaaataacgtcctgaacaaattgtc                                                                                                                         >  4:1349651‑M1/1‑120 (MQ=255)

                                tGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcca                                                                                                                       <  7:710434‑M1/150‑33 (MQ=255)

                                 gACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccata                                                                                                                     <  6:178784‑M1/151‑35 (MQ=255)

                                      cGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTGTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatatt                                                                                                                <  8:1142259‑M1/151‑40 (MQ=255)

                                       gTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatatt                                                                                                                >  2:996006‑M1/1‑111 (MQ=255)

                                       gTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatatt                                                                                                                >  6:750000‑M1/1‑111 (MQ=255)

                                         aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattaca                                                                                                             <  4:270082‑M1/151‑43 (MQ=255)

                                         aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                              <  8:2034649‑M1/150‑42 (MQ=255)

                                            ggTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatt                                                                                                          <  4:391966‑M1/151‑46 (MQ=255)

                                            ggTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatt                                                                                                          <  6:1368925‑M1/151‑46 (MQ=255)

                                             gTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatta                                                                                                         <  2:1330976‑M1/151‑47 (MQ=255)

                                             gTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatt                                                                                                          >  5:1922946‑M1/1‑105 (MQ=255)

                                               aaTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATACAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattat                                                                                                        >  6:1041352‑M1/1‑103 (MQ=255)

                                                    cTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgc                                                                                                    >  3:1785047‑M1/1‑98 (MQ=255)

                                                      gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcag                                                                                                  <  8:1680842‑M1/149‑54 (MQ=255)

                                                      gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgca                                                                                                   <  4:640699‑M1/148‑53 (MQ=255)

                                                       tAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAAGCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgt                                                                                               >  7:2080683‑M1/1‑95 (MQ=255)

                                                        aGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgtt                                                                                              <  5:893912‑M1/151‑58 (MQ=255)

                                                        aGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgtt                                                                                              >  5:1281863‑M1/1‑94 (MQ=255)

                                                         gCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttg                                                                                             >  2:2191524‑M1/1‑93 (MQ=255)

                                                          cAATAGCAATAACTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGATAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgc                                                                                            <  5:1791687‑M1/151‑60 (MQ=255)

                                                            aTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgctt                                                                                          >  7:976264‑M1/1‑90 (MQ=255)

                                                              aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttct                                                                                        >  2:1754484‑M1/1‑88 (MQ=255)

                                                                ccAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcg                                                                                      <  6:2139953‑M1/151‑66 (MQ=255)

                                                                 cAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgt                                                                                     >  5:1162947‑M1/1‑85 (MQ=255)

                                                                  aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtc                                                                                    >  2:1172709‑M1/1‑84 (MQ=255)

                                                                    aCCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcat                                                                                  >  5:1547346‑M1/1‑82 (MQ=255)

                                                                    aCCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcat                                                                                  >  8:138858‑M1/1‑82 (MQ=255)

                                                                    aCCTAATAAAATCCAAAAAATATACATTGTCGTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACGAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcat                                                                                  <  5:417160‑M1/151‑70 (MQ=255)

                                                                        aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcg                                                                              <  8:1105981‑M1/151‑74 (MQ=255)

                                                                        aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcg                                                                              >  3:2127870‑M1/1‑78 (MQ=255)

                                                                        aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgc                                                                               <  7:247181‑M1/150‑73 (MQ=255)

                                                                         ataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgg                                                                             <  4:499933‑M1/151‑75 (MQ=255)

                                                                         ataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgg                                                                             >  3:970441‑M1/1‑77 (MQ=255)

                                                                          taaAATCCAATAAATATACATTGTCCTTCTCCTGCAACAGAATTATTTTAATTTTCCCTTAATTGAGCGATACCATtgtacaaaataacgtcctgaacaaaatgtgcataatattacaattaaccgcagagttccttctcgtcatcggcgt                                                                            >  2:1660296‑M1/1‑76 (MQ=255)

                                                                           aaaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggat                                                                           <  7:1980846‑M1/151‑77 (MQ=255)

                                                                             aataaaataaatatagatTGTCCTTCTCCTGGAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatga                                                                         <  8:296355‑M1/146‑79 (MQ=255)

                                                                                cgtttaaatatacaTTGTGCTTCTCCTGCAAGAGAATTATTTTATTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtggattatattacaattatccgcagtgttgcttctcgtcatcgcggatgata                                                                       <  7:1889909‑M1/146‑81 (MQ=255)

                                                                                ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgata                                                                       >  7:1012603‑M1/1‑70 (MQ=255)

                                                                                 cAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcacggatgataat                                                                     <  8:1511219‑M1/151‑83 (MQ=255)

                                                                                  aataaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgccgatgataatt                                                                    >  1:372258‑M1/1‑68 (MQ=255)

                                                                                           aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggt                                                           >  8:1932936‑M1/1‑59 (MQ=255)

                                                                                           aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggt                                                           <  3:1977834‑M1/151‑93 (MQ=255)

                                                                                           aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcgg                                                            <  3:1156817‑M1/150‑92 (MQ=255)

                                                                                            cATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggta                                                          <  8:662770‑M1/151‑94 (MQ=255)

                                                                                             aTTGTCCTTCACCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtag                                                         <  5:683504‑M1/151‑95 (MQ=255)

                                                                                                gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagtt                                                       <  1:1002489‑M1/150‑97 (MQ=255)

                                                                                                 tCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctcaacaaattgtccataatattacaattatccgcactgttgcttctcgacatcgcggatgataattgtcctcggtacttg                                                      >  5:2184392‑M1/1‑53 (MQ=255)

                                                                                                     tctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcgtcggtagttgaacac                                                 >  4:776759‑M1/1‑49 (MQ=255)

                                                                                                        ccTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacac                                                 <  6:1650195‑M1/148‑103 (MQ=255)

                                                                                                           gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagtttaacacgcctg                                            <  7:309503‑M1/150‑108 (MQ=255)

                                                                                                               gagaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttg                                       <  6:1152488‑M1/151‑113 (MQ=255)

                                                                                                               gagaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttg                                       <  3:2112452‑M1/151‑113 (MQ=255)

                                                                                                                  aaTTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATgg                                    <  4:675422/151‑1 (MQ=255)

                                                                                                                   attattTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatc                                   >  2:1450307‑M1/1‑35 (MQ=255)

                                                                                                                      attTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcata                                <  6:233149‑M1/151‑120 (MQ=255)

                                                                                                                       ttttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcattgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                                 >  3:654870‑M1/1‑31 (MQ=255)

                                                                                                                       ttttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                                 >  8:181026‑M1/1‑31 (MQ=255)

                                                                                                                        tttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagc                              >  3:1711548‑M1/1‑30 (MQ=255)

                                                                                                                           aaTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                            <  5:148731‑M1/150‑124 (MQ=255)

                                                                                                                            aTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctcaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaa                          <  6:839351‑M1/151‑126 (MQ=255)

                                                                                                                                tCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaat                      >  1:1561033‑M1/1‑22 (MQ=255)

                                                                                                                                 cGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatt                     >  7:1657251‑M1/1‑21 (MQ=255)

                                                                                                                                   cTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatta                    >  4:2067452‑M1/1‑19 (MQ=255)

                                                                                                                                     tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact                 >  4:107434‑M1/1‑17 (MQ=255)

                                                                                                                                     tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact                 >  3:1286524‑M1/1‑17 (MQ=255)

                                                                                                                                     tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaac                  <  3:482251‑M1/150‑134 (MQ=255)

                                                                                                                                       aTTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactc                >  2:1017026‑M1/1‑15 (MQ=255)

                                                                                                                                          caccgaaACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaa             <  4:1124544‑M1/147‑139 (MQ=255)

                                                                                                                                           aGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaat           <  6:1245393‑M1/151‑141 (MQ=255)

                                                                                                                                           aGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaat           <  1:216254‑M1/151‑141 (MQ=255)

                                                                                                                                           aGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaat           <  1:1298000‑M1/151‑141 (MQ=255)

                                                                                                                                             cGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatat         <  8:2150950‑M1/151‑143 (MQ=255)

                                                                                                                                              gAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatt        >  1:538948‑M1/1‑8 (MQ=255)

                                                                                                                                              gAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatt        >  6:1452991‑M1/1‑8 (MQ=255)

                                                                                                                                                 aCCAAtgtagaaaataacgtcctgaacaaattgtccatactattacaattatgcgctgtgttgcttctcgtcatcgcggatgataattgtcctctgtagttgaacacgactgacttgtatcatatgttaagaattaactcaaaatattttc     <  1:2082912‑M1/151‑147 (MQ=255)

                                                                                                                                                 aCCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttc     <  4:151232‑M1/151‑147 (MQ=255)

                                                                                                                                                   cAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcac   >  4:865548‑M1/1‑3 (MQ=255)

                                                                                                                                                    aatgtagaaaattacgtcctgaacatattgtccataatatttcaattatcggctgtgttggttcgcgtcatcgcggatgataattgtcctcggtagttgaacacgccttatttgtatcatagcttaagaattaactcaatatattttcact  <  7:1526522‑M1/151‑150 (MQ=255)

                                                                                                                                                    aatgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcact  >  7:549212‑M1/1‑2 (MQ=255)

CCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGT  >  NC_000913/1673407‑1673705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`