BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	317 [1]	[0] 317	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	1 (0.000)	311 (0.570)	190/296	1.1	99.8%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	311 (0.570)	190/296	1.1	99.8%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 317 total aligned reads displayed.

TTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673527‑1673826

ccatttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaat                                                                                                                                                       >  6:419739‑M2/151‑151 (MQ=255)

 catttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaatt                                                                                                                                                      >  3:216609‑M2/150‑150 (MQ=255)

  atttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  4:1821619‑M2/149‑151 (MQ=255)

   tttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttatgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaacaaaTGt                                                                                                                                                     >  1:482182‑M2/148‑150 (MQ=255)

    ttccctcactgaagctggcacatttcattgacagagtaccggtaatttctgtagcaatagccagacctattaaaatccaataaatatacattgtacttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTa                                                                                                                                                    <  1:1883047‑M2/4‑1 (MQ=255)

     tccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  7:1310208‑M2/146‑148 (MQ=255)

     tccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtcattctcctgcaagagaattattttaattttcgcttaattaagcgaaaccaaTGt                                                                                                                                                     >  6:1528188‑M2/146‑148 (MQ=255)

         tcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAAt                                                                                                                                              >  7:838278‑M2/142‑151 (MQ=255)

          cactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGaaaa                                                                                                                                               <  1:872362‑M2/9‑1 (MQ=255)

          cactgacgctcgcccatttcattgacagcgtaacggtaatttctgtagcaatagccagacctaataaaatcaaataaatatacattgtacttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAAt                                                                                                                                              >  4:716231‑M2/141‑150 (MQ=255)

             tgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACg                                                                                                                                          >  3:1480678‑M2/138‑151 (MQ=255)

              gacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAAc                                                                                                                                           <  2:8038‑M2/13‑1 (MQ=255)

               acgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTc                                                                                                                                        >  4:2150012‑M2/136‑151 (MQ=255)

                    cgcccatttcattgacagcgtaccggtaatttctgtatcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGaa                                                                                                                                   <  1:146396‑M2/21‑1 (MQ=255)

                     gcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAAc                                                                                                                                  >  1:1486222‑M2/130‑151 (MQ=255)

                      cccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACa                                                                                                                                 <  1:1358357‑M2/23‑1 (MQ=255)

                        catttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccagTGTAGAAAATAACGTCCTGAACaa                                                                                                                                >  3:1800037‑M2/127‑150 (MQ=255)

                            tcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTg                                                                                                                            <  2:1508294‑M2/28‑1 (MQ=255)

                              attgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTcc                                                                                                                         >  2:2007567‑M2/121‑151 (MQ=255)

                              attgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTcc                                                                                                                         <  6:1833722‑M2/31‑1 (MQ=255)

                              attgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgattaattcagagaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTc                                                                                                                          >  4:1349651‑M2/121‑150 (MQ=255)

                                tgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCa                                                                                                                        <  7:710434‑M2/32‑1 (MQ=255)

                                 gacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCata                                                                                                                      <  6:178784‑M2/34‑1 (MQ=255)

                                  acagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCataa                                                                                                                     <  5:1845659‑M2/35‑1 (MQ=255)

                                      cgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttgtcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 <  8:1142259‑M2/39‑1 (MQ=255)

                                       gtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 >  2:996006‑M2/112‑150 (MQ=255)

                                       gtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 >  6:750000‑M2/112‑150 (MQ=255)

                                         accggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTAc                                                                                                               >  4:802539‑M2/110‑150 (MQ=255)

                                         accggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTAc                                                                                                               <  8:2034649‑M2/41‑1 (MQ=255)

                                         accggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACa                                                                                                              <  4:270082‑M2/42‑1 (MQ=255)

                                          ccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACa                                                                                                              >  5:1303677‑M2/109‑150 (MQ=255)

                                            ggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAtt                                                                                                           <  4:391966‑M2/45‑1 (MQ=255)

                                            ggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAtt                                                                                                           <  6:1368925‑M2/45‑1 (MQ=255)

                                             gtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTa                                                                                                          <  2:1330976‑M2/46‑1 (MQ=255)

                                               aatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaatacagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTAt                                                                                                         >  6:1041352‑M2/104‑150 (MQ=255)

                                                    ctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGc                                                                                                     >  3:1785047‑M2/99‑149 (MQ=255)

                                                      gtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCa                                                                                                    <  4:640699‑M2/52‑1 (MQ=255)

                                                      gtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAg                                                                                                   <  8:1680842‑M2/53‑1 (MQ=255)

                                                       tagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaagcaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtgt                                                                                                >  7:2080683‑M2/96‑151 (MQ=255)

                                                        agcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGtt                                                                                               <  5:893912‑M2/57‑1 (MQ=255)

                                                         gcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTg                                                                                              >  2:2191524‑M2/94‑151 (MQ=255)

                                                            atagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCtt                                                                                           >  7:976264‑M2/91‑151 (MQ=255)

                                                              agccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtct                                                                                         >  2:1754484‑M2/89‑151 (MQ=255)

                                                                ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       <  6:2139953‑M2/65‑1 (MQ=255)

                                                                  agacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTc                                                                                     >  2:1172709‑M2/85‑151 (MQ=255)

                                                                    acctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCAt                                                                                   >  8:138858‑M2/83‑151 (MQ=255)

                                                                    acctaataaaatccaaaaaatatacattgtcgttctcctgcaagagaattattttaattttcgcttaattcagcgaaacgaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCAt                                                                                   <  5:417160‑M2/69‑1 (MQ=255)

                                                                        aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgcg                                                                               >  3:2127870‑M2/79‑151 (MQ=255)

                                                                        aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgcg                                                                               <  8:1105981‑M2/73‑1 (MQ=255)

                                                                        aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgc                                                                                <  7:247181‑M2/72‑1 (MQ=255)

                                                                         ataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCgg                                                                              <  4:499933‑M2/74‑1 (MQ=255)

                                                                         ataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCgg                                                                              >  3:970441‑M2/78‑151 (MQ=255)

                                                                          taaaatccaataaatatacattgtccttctcctgcaacagaattattttaattttcccttaattgagcgataccatTGTACAAAATAACGTCCTGAACAAAATGTGCATAATATTACAATTAACCGCAGAGTTCCTTCTCGtcatcggcgt                                                                             >  2:1660296‑M2/77‑147 (MQ=255)

                                                                           aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgat                                                                            <  7:1980846‑M2/76‑1 (MQ=255)

                                                                           aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgat                                                                            <  5:1995109‑M2/76‑1 (MQ=255)

                                                                             aataaaataaatatagattgtccttctcctggaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgatga                                                                          <  8:296355‑M2/78‑1 (MQ=255)

                                                                                cgtttaaatatacattgtgcttctcctgcaagagaattattttatttttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTGGATTATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATa                                                                        <  7:1889909‑M2/80‑1 (MQ=255)

                                                                                ccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATa                                                                        >  7:1012603‑M2/71‑150 (MQ=255)

                                                                                 caataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCACGGATGATAAt                                                                      <  8:1511219‑M2/82‑1 (MQ=255)

                                                                                  aataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCCGATGATAAtt                                                                     >  1:372258‑M2/69‑151 (MQ=255)

                                                                                           acattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCgg                                                             <  3:1156817‑M2/91‑1 (MQ=255)

                                                                                           acattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGt                                                            >  8:1932936‑M2/60‑151 (MQ=255)

                                                                                           acattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGt                                                            <  3:1977834‑M2/92‑1 (MQ=255)

                                                                                            cattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTa                                                           <  8:662770‑M2/93‑1 (MQ=255)

                                                                                             attgtccttcacctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAg                                                          <  5:683504‑M2/94‑1 (MQ=255)

                                                                                                gtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGtt                                                        <  1:1002489‑M2/96‑1 (MQ=255)

                                                                                                      atcattcaagagaattattttaattttcgcttaattcatcgaaaccaaTGTAGAAAATAACGTGCTGAACAAATTCTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACg                                                 <  5:282043‑M2/103‑1 (MQ=255)

                                                                                                        cctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAacac                                                  <  6:1650195‑M2/102‑1 (MQ=255)

                                                                                                           gcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTTAACACGCCTg                                             <  7:309503‑M2/107‑1 (MQ=255)

                                                                                                             aagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAtt                                          >  5:1168244‑M2/42‑151 (MQ=255)

                                                                                                               gagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTg                                        <  6:1152488‑M2/112‑1 (MQ=255)

                                                                                                               gagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTg                                        <  3:2112452‑M2/112‑1 (MQ=255)

                                                                                                                   attattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATc                                    >  2:1450307‑M2/36‑151 (MQ=255)

                                                                                                                      attttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCAt                                  <  5:1776383‑M2/118‑1 (MQ=255)

                                                                                                                      attttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATa                                 <  6:233149‑M2/119‑1 (MQ=255)

                                                                                                                       ttttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCATTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCAt                                  >  3:654870‑M2/32‑149 (MQ=255)

                                                                                                                       ttttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCAt                                  >  8:181026‑M2/32‑149 (MQ=255)

                                                                                                                        tttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAg                                <  4:919232‑M2/120‑1 (MQ=255)

                                                                                                                        tttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGc                               >  3:1711548‑M2/31‑151 (MQ=255)

                                                                                                                            attttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTCAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTaa                           <  6:839351‑M2/125‑1 (MQ=255)

                                                                                                                             ttttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            >  5:1507587‑M2/26‑149 (MQ=255)

                                                                                                                                tcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAt                       >  1:1561033‑M2/23‑151 (MQ=255)

                                                                                                                                 cgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAtt                      >  7:1657251‑M2/22‑151 (MQ=255)

                                                                                                                                   cttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTa                     >  4:2067452‑M2/20‑150 (MQ=255)

                                                                                                                                     taattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAAc                   <  3:482251‑M2/133‑1 (MQ=255)

                                                                                                                                     taattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACt                  >  3:1286524‑M2/18‑151 (MQ=255)

                                                                                                                                     taattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACt                  >  4:107434‑M2/18‑151 (MQ=255)

                                                                                                                                       attcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTc                 >  2:1017026‑M2/16‑150 (MQ=255)

                                                                                                                                          caccgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaa              <  4:1124544‑M2/138‑1 (MQ=255)

                                                                                                                                           agcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAat            <  1:216254‑M2/140‑1 (MQ=255)

                                                                                                                                           agcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAat            <  1:1298000‑M2/140‑1 (MQ=255)

                                                                                                                                           agcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAat            <  6:1245393‑M2/140‑1 (MQ=255)

                                                                                                                                             cgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAatat          <  8:2150950‑M2/142‑1 (MQ=255)

                                                                                                                                              gaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAtt         >  1:538948‑M2/9‑151 (MQ=255)

                                                                                                                                              gaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAtt         >  6:1452991‑M2/9‑151 (MQ=255)

                                                                                                                                                 accaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATACTATTACAATTATGCGCTGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCTGTAGTTGAACACGACTGACTTGTATCATATGTTAAGAATTAACTCAAAATATTTTc      <  1:2082912‑M2/146‑1 (MQ=255)

                                                                                                                                                 accaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTc      <  4:151232‑M2/146‑1 (MQ=255)

                                                                                                                                                  ccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTc      >  5:1560805‑M2/5‑150 (MQ=255)

                                                                                                                                                    aaTGTAGAAAATTACGTCCTGAACATATTGTCCATAATATTTCAATTATCGGCTGTGTTGGTTCGCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTTATTTGTATCATAGCTTAAGAATTAACTCAATATATTTTCACt   <  7:1526522‑M2/149‑1 (MQ=255)

                                                                                                                                                    aaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACt   >  7:549212‑M2/3‑151 (MQ=255)

TTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673527‑1673826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`