BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	314 (0.610)	184/298	1.0	51.8%	noncoding (1/768 nt)	IS1	repeat region
*	?	NC_000913	= 4542049	292 (0.570)	314 (0.610)	184/298	1.0	51.8%	coding (13/597 nt)	fimE	tyrosine recombinase/inversion of on/off regulator of fimA

Only 100 of 332 total aligned reads displayed.

GCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583578‑3583428

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATCAT  <  NC_000913/4542049‑4541900

GCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                        <  3:1686531/151‑1

GCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                        >  8:572743/1‑151

GCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACACCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                        <  5:1054701/151‑1

 CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG                                                                                                                                                       >  4:608896/1‑151

 CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG                                                                                                                                                       >  2:1602458/1‑151

   GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAC                                                                                                                                                     >  1:1479253/1‑151

       TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTT                                                                                                                                                 >  7:981897/1‑151

        AGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGTAGCATCACCGACGTTT                                                                                                                                                 <  1:15400/150‑1

        AGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTT                                                                                                                                                 >  4:1772566/1‑150

        AGCGCTGATGGCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTT                                                                                                                                                 <  3:1264833/150‑1

           GCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTC                                                                                                                                             >  7:346779/1‑151

              GATGTCCGGCGGTGCTTTTGCCTTTACGCACGACCCCGTCAGTAGCTGAACATGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCA                                                                                                                                            <  7:655285/149‑1

               ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACA                                                                                                                                          >  3:739341/1‑150

                 GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAAT                                                                                                                                        >  5:2003397/1‑150

                    CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTA                                                                                                                                    <  4:522757/151‑1

                    CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTA                                                                                                                                    <  2:221155/151‑1

                            CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCT                                                                                                                            >  1:1085432/1‑151

                              TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTA                                                                                                                           >  7:832462/1‑150

                              TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTA                                                                                                                           <  7:1313735/150‑1

                              TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTA                                                                                                                           <  5:500431/150‑1

                                TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAAC                                                                                                                         <  7:469036/150‑1

                                  CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGA                                                                                                                      <  2:1380993/151‑1

                                    GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGA                                                                                                                    <  4:807751/151‑1

                                    GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTG                                                                                                                       >  7:895676/1‑148

                                     TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTG                                                                                                                       >  7:1429036/1‑147

                                       ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATAT                                                                                                                 <  2:1258878/151‑1

                                          CACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATT                                                                                                              <  2:739595/151‑1

                                           ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTT                                                                                                             <  5:1919878/151‑1

                                             CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTG                                                                                                            >  5:1322589/1‑150

                                             CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTG                                                                                                            >  4:301782/1‑150

                                              ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAA                                                                                                          <  7:1792443/151‑1

                                               CCCCGTCAGTAGCTGAACAGGAGGGACATCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAAT                                                                                                         <  4:1660276/151‑1

                                                CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATG                                                                                                        <  6:1638777/151‑1

                                                 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGA                                                                                                       <  2:1059696/151‑1

                                                 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATG                                                                                                        >  1:360135/1‑150

                                                 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATG                                                                                                        >  8:215065/1‑150

                                                   GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAAT                                                                                                     >  4:1540338/1‑151

                                                   GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAACGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAAT                                                                                                     >  8:1640022/1‑151

                                                         cGCTGAACAGGAGGGACAGCTGATAGATACTGAAGCCAGTGGAGCAACTCAAAAAGACCATCATACTCTATATCTGTAAGTTGGCAGCATCAGCGACGTTTACTGAGAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTA                                                                                                <  8:1918606/149‑1

                                                         AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTAT                                                                                               >  8:1705484/1‑151

                                                             GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGG                                                                                            >  4:1018590/1‑150

                                                             GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAG                                                                                             <  8:1124483/149‑1

                                                             GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTACTAACTGAGATATATTTGAATGAATACCTATAGG                                                                                            >  8:536651/1‑150

                                                                 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACC                                                                                       >  3:1933210/1‑151

                                                                  GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCT                                                                                      <  6:587575/151‑1

                                                                           GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTC                                                                             <  3:3457/151‑1

                                                                              GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCA                                                                            <  3:487842/149‑1

                                                                                 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATT                                                                       >  7:1585881/1‑151

                                                                                  GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATT                                                                       >  5:1593924/1‑150

                                                                                   AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATT                                                                       >  5:85223/1‑149

                                                                                    AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGC                                                                    >  4:894482/1‑151

                                                                                      CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCC                                                                  >  8:708756/1‑151

                                                                                          AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAAT                                                               >  8:1401204/1‑150

                                                                                          AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAAT                                                               >  1:1667818/1‑150

                                                                                            CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATAACTATAGGAAACCTCAATCGGTCAAAATTAGCCCAAT                                                               >  1:615633/1‑148

                                                                                              ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATA                                                          <  6:6487/151‑1

                                                                                              ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGAT                                                           >  5:1102950/1‑150

                                                                                               CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATA                                                          >  4:565518/1‑150

                                                                                                TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAA                                                         >  6:1471227/1‑150

                                                                                                 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAA                                                       <  7:1012201/151‑1

                                                                                                 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAA                                                         <  2:293056/149‑1

                                                                                                     CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTAGTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGA                                                    <  3:1795040/150‑1

                                                                                                     CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAA                                                       >  8:656704/1‑147

                                                                                                       CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAA                                                 <  1:1291375/151‑1

                                                                                                       CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATA                                                  >  1:254978/1‑150

                                                                                                       CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATA                                                  >  3:105894/1‑150

                                                                                                            AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACA                                            <  6:28353/151‑1

                                                                                                                 ACCATCATACACTAAATCAGTAAGTTCGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGG                                       <  4:1894404/151‑1

                                                                                                                  CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCGCAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGA                                      <  8:32125/151‑1

                                                                                                                  CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGA                                      <  7:1102992/151‑1

                                                                                                                   CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAG                                     <  2:888315/151‑1

                                                                                                                    ATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGT                                    >  5:618168/1‑151

                                                                                                                      CATACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTG                                   >  1:824572/1‑150

                                                                                                                         ACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATTCCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATG                                <  8:498476/150‑1

                                                                                                                         ACACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACAACACACGGAGTGATGT                               >  3:1097007/1‑151

                                                                                                                          CACTAAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAAGCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTG                              <  6:615907/151‑1

                                                                                                                              AAATCAGTAAGTTGGCAGCATCACCGACTTTTACTCACAATAGTATTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGC                            <  4:1180211/149‑1

                                                                                                                              AAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTA                          <  3:222117/151‑1

                                                                                                                              AAATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCT                           >  2:1958368/1‑150

                                                                                                                               AATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTAT                         <  2:669740/151‑1

                                                                                                                                ATCAGTAAGTTGGCAGCATCTCCGACGTTTACTCACAATAGTAGTACTCCTAACTGATATTTATTTTAATGAATACCTATAGGAAACCTCAATCGTTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATC                        <  3:822866/151‑1

                                                                                                                                ATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATC                        >  8:876442/1‑151

                                                                                                                                ATCAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATC                        >  6:1237109/1‑151

                                                                                                                                  CAGTAAGTTGGCAGCATCACCGCCGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAATGATAAGCACACACGGAGTGATGTGGCTATCAG                      <  7:272779/151‑1

                                                                                                                                  CAGTAAGTTGGCAGCATCACCGACGTTTACTCACAATACTAGTACTCCTAACTGACATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAG                      <  7:1683769/151‑1

                                                                                                                                   AGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGT                     >  5:1489109/1‑151

                                                                                                                                   AGTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGT                     <  3:289676/151‑1

                                                                                                                                    GTAAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTC                    >  3:1349185/1‑151

                                                                                                                                      AAGTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCAATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGCACAGATGTGGCTATCAGTCA                   >  8:1315033/1‑150

                                                                                                                                        GTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATT                <  4:684426/151‑1

                                                                                                                                        GTTGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATT                <  2:1905061/151‑1

                                                                                                                                          TGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTAC              >  1:1809610/1‑151

                                                                                                                                          TGGCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTA               <  6:1038098/150‑1

                                                                                                                                            GCAGCATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACAT            <  6:1812792/151‑1

                                                                                                                                                 ATCACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAAT       >  4:1323068/1‑151

                                                                                                                                                   CACCTACGTTTACTCACAATAGTAGTACTCCTAACTTAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCAAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATA      >  3:1572463/1‑150

                                                                                                                                                    ACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATC    >  3:638273/1‑151

                                                                                                                                                    ACCGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATC    >  5:386606/1‑151

                                                                                                                                                      CGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATCAT  <  1:1945486/151‑1

                                                                                                                                                      CGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATCAT  >  1:1032691/1‑151

GCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583578‑3583428

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGACGTTTACTCACAATAGTAGTACTCCTAACTGAGATATATTTGAATGAATACCTATAGGAAACCTCAATCGGTCAAAATTAGCCCAATAGATAAAAAGATAACCACACACGGAGTGATGTGGCTATCAGTCAATTACATTAAATATCAT  <  NC_000913/4542049‑4541900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.