BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	500 [0]	[0] 500	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	0 (0.000)	487 (1.010)	237/296	0.0	100%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	487 (1.010)	237/296	0.0	100%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 500 total aligned reads displayed.

TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673528‑1673826

catttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTg                                                                                                                                                      <  7:1845986‑M2/2‑1 (MQ=255)

catttcccgcactgacgctcgcccatttccttcacagcggaccggtaatttctggagcaatagccagaccttataaaatgcaatatatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTg                                                                                                                                                      <  1:1080920‑M2/2‑1 (MQ=255)

 atttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  2:370943‑M2/149‑151 (MQ=255)

   ttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTa                                                                                                                                                    <  5:684338‑M2/4‑1 (MQ=255)

    tccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  5:1328613‑M2/146‑148 (MQ=255)

    tccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAg                                                                                                                                                   <  6:609507‑M2/5‑1 (MQ=255)

     ccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGaa                                                                                                                                                 <  1:747878‑M2/7‑1 (MQ=255)

              acgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTc                                                                                                                                        >  8:266686‑M2/136‑151 (MQ=255)

                 ctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTg                                                                                                                                     >  6:352264‑M2/133‑151 (MQ=255)

                  tcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTg                                                                                                                                     >  4:315633‑M2/132‑150 (MQ=255)

                   cgcccatatcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTg                                                                                                                                     <  5:1159115‑M2/19‑1 (MQ=255)

                       catttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAAc                                                                                                                                           <  8:1081520‑M2/13‑1 (MQ=255)

                       catttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACaaa                                                                                                                               <  8:768729‑M2/25‑1 (MQ=255)

                        atttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAAt                                                                                                                              <  4:1922699‑M2/26‑1 (MQ=255)

                        atttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAAt                                                                                                                              <  3:1627849‑M2/26‑1 (MQ=255)

                         tttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAAtt                                                                                                                             >  6:1721302‑M2/125‑151 (MQ=255)

                          ttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTg                                                                                                                            >  4:1795201‑M2/124‑151 (MQ=255)

                                     cgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 >  1:872744‑M2/113‑151 (MQ=255)

                                     cgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 <  4:662995‑M2/39‑1 (MQ=255)

                                      gtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTa                                                                                                                <  3:70645‑M2/40‑1 (MQ=255)

                                        accggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACa                                                                                                              <  6:1837014‑M2/42‑1 (MQ=255)

                                         ccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACaa                                                                                                             <  8:478048‑M2/43‑1 (MQ=255)

                                            gtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAtt                                                                                                           >  5:177049‑M2/106‑150 (MQ=255)

                                               atttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATcc                                                                                                       <  3:1223189‑M2/49‑1 (MQ=255)

                                                 ttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCg                                                                                                      <  4:419117‑M2/50‑1 (MQ=255)

                                                     gtagcaatagccagacctaataaaatcgaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCa                                                                                                    <  5:1933538‑M2/52‑1 (MQ=255)

                                                     gtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtg                                                                                                 >  3:1739144‑M2/97‑151 (MQ=255)

                                                     gtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGGCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtg                                                                                                 <  3:1502919‑M2/55‑1 (MQ=255)

                                                        gcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTg                                                                                              >  5:378462‑M2/94‑151 (MQ=255)

                                                        gcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTg                                                                                              >  7:549019‑M2/94‑151 (MQ=255)

                                                         caatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTtgg                                                                                             <  7:94219‑M2/59‑2 (MQ=255)

                                                         caatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGc                                                                                             <  6:1462335‑M2/59‑1 (MQ=255)

                                                            tagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtc                                                                                          >  8:1261388‑M2/90‑151 (MQ=255)

                                                            tagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATAGTCCATAATATTACAATTATCCGCAGTGTTGCTtc                                                                                          >  4:746498‑M2/90‑151 (MQ=255)

                                                             agccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtct                                                                                         <  8:903959‑M2/63‑1 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       >  5:1586362‑M2/87‑151 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       <  3:1807296‑M2/65‑1 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       >  4:166709‑M2/87‑151 (MQ=255)

                                                                cagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGt                                                                                      >  7:1503777‑M2/86‑151 (MQ=255)

                                                                   acctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCAt                                                                                   >  7:1399610‑M2/83‑151 (MQ=255)

                                                                    cctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATc                                                                                  >  2:897293‑M2/82‑151 (MQ=255)

                                                                      taataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgc                                                                                >  8:59112‑M2/80‑151 (MQ=255)

                                                                      taataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgc                                                                                >  8:336317‑M2/80‑151 (MQ=255)

                                                                      taataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgc                                                                                >  7:1312944‑M2/80‑151 (MQ=255)

                                                                       aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgcg                                                                               >  6:768152‑M2/79‑151 (MQ=255)

                                                                          aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgat                                                                            >  1:277047‑M2/76‑151 (MQ=255)

                                                                           aaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgatg                                                                           >  2:1179900‑M2/75‑151 (MQ=255)

                                                                            aatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgatg                                                                           >  7:1785880‑M2/74‑150 (MQ=255)

                                                                                    aaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGt                                                                   <  4:1041754‑M2/85‑1 (MQ=255)

                                                                                    aaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTc                                                                  <  2:824513‑M2/86‑1 (MQ=255)

                                                                                    aaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTc                                                                  >  4:852908‑M2/66‑151 (MQ=255)

                                                                                       tatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTc                                                               >  6:732840‑M2/63‑151 (MQ=255)

                                                                                                 ccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGa                                                      >  2:1440143‑M2/53‑150 (MQ=255)

                                                                                                    tctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAacac                                                  >  5:838848‑M2/50‑151 (MQ=255)

                                                                                                    tctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAacac                                                  >  7:744145‑M2/50‑151 (MQ=255)

                                                                                                    tctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAaca                                                   <  2:1748243‑M2/101‑1 (MQ=255)

                                                                                                           caagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAt                                           <  7:400948‑M2/109‑1 (MQ=255)

                                                                                                           caagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAt                                           >  1:1908697‑M2/43‑151 (MQ=255)

                                                                                                            aagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAtt                                          >  7:1656302‑M2/42‑151 (MQ=255)

                                                                                                            aagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAtt                                          >  3:886116‑M2/42‑151 (MQ=255)

                                                                                                            aagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAtt                                          >  8:1914055‑M2/42‑151 (MQ=255)

                                                                                                             agagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAttt                                         <  3:1067673‑M2/111‑1 (MQ=255)

                                                                                                              gagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTg                                        >  6:1610305‑M2/40‑151 (MQ=255)

                                                                                                               agaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGt                                       >  3:227731‑M2/39‑151 (MQ=255)

                                                                                                                gaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGt                                       >  8:1195992‑M2/38‑150 (MQ=255)

                                                                                                                    tattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCa                                   <  1:152830‑M2/117‑1 (MQ=255)

                                                                                                                    tattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCAt                                  >  4:485527‑M2/34‑151 (MQ=255)

                                                                                                                         taattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCtt                             >  4:1151127‑M2/29‑151 (MQ=255)

                                                                                                                          aattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCtt                             <  8:662783‑M2/123‑1 (MQ=255)

                                                                                                                          aattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            <  4:1303691‑M2/124‑1 (MQ=255)

                                                                                                                          aattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            <  1:460968‑M2/124‑1 (MQ=255)

                                                                                                                          aattttcgcttaattcagcgaaaccaaTCTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCtt                             <  6:1160410‑M2/123‑1 (MQ=255)

                                                                                                                          aattttcgcttaattcagcgaaacaaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            <  3:1293640‑M2/124‑1 (MQ=255)

                                                                                                                           attatcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTaa                           <  1:636306‑M2/125‑1 (MQ=255)

                                                                                                                            ttttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            >  6:916068‑M2/26‑149 (MQ=255)

                                                                                                                            ttttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTCTTGCTTCTCGTCATCGCGGAAGATAAATATCATCGGTAGTTGAACACGACTGATTTCTATCATAGCTTaa                           >  1:1227789‑M2/26‑150 (MQ=255)

                                                                                                                                cgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAtt                      >  1:69389‑M2/22‑151 (MQ=255)

                                                                                                                                 gcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTa                     <  2:1895495‑M2/131‑1 (MQ=255)

                                                                                                                                 gcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTa                     <  1:1623320‑M2/131‑1 (MQ=255)

                                                                                                                                   ttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAAc                   >  2:1033296‑M2/19‑151 (MQ=255)

                                                                                                                                    taattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAAc                   <  8:1624811‑M2/133‑1 (MQ=255)

                                                                                                                                     aattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTGCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCGTAAGAATTAACt                  >  5:26284‑M2/17‑150 (MQ=255)

                                                                                                                                     aattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACt                  >  3:403229‑M2/17‑150 (MQ=255)

                                                                                                                                      attcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCa                <  3:58973‑M2/136‑1 (MQ=255)

                                                                                                                                      attcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCa                <  1:135112‑M2/136‑1 (MQ=255)

                                                                                                                                        tcagctaaaccaaTTTAGAAAATAACTTCATGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCCTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaa               <  2:662733‑M2/137‑1 (MQ=255)

                                                                                                                                         cagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaa              >  8:1417721‑M2/13‑150 (MQ=255)

                                                                                                                                         cagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaa              <  2:1596460‑M2/138‑1 (MQ=255)

                                                                                                                                          agcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAat            >  8:428969‑M2/12‑151 (MQ=255)

                                                                                                                                           ccgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGA‑TTGTATCATAGCTTAAGAATTAACTCAAAatat          <  6:851118‑M2/141‑1 (MQ=255)

                                                                                                                                            cgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAatat          <  1:1812729‑M2/142‑1 (MQ=255)

                                                                                                                                             gaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAtt         >  3:627292‑M2/9‑151 (MQ=255)

                                                                                                                                               aaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAtttt       >  2:1830457‑M2/7‑151 (MQ=255)

                                                                                                                                               aaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAtttt       <  7:1559503‑M2/145‑1 (MQ=255)

                                                                                                                                                  caaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCAc    >  4:977494‑M2/4‑151 (MQ=255)

                                                                                                                                                  caaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCAc    >  7:1098671‑M2/4‑151 (MQ=255)

                                                                                                                                                   aaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACt   >  4:1490915‑M2/3‑151 (MQ=255)

                                                                                                                                                   aaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACt   >  4:1424272‑M2/3‑151 (MQ=255)

                                                                                                                                                    aTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACtt  <  5:1266140‑M2/150‑1 (MQ=255)

                                                                                                                                                    aTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACtt  <  2:1393364‑M2/150‑1 (MQ=255)

TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673528‑1673826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`