BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	450 [0]	[0] 451	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	0 (0.000)	443 (1.110)	223/296	0.0	100%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	443 (1.110)	223/296	0.0	100%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 450 total aligned reads displayed.

GCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATT  >  NC_000913/1673406‑1673703

   aTTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgt                                                                                                                                                  >  5:430697‑M1/1‑148 (MQ=255)

   aTTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgt                                                                                                                                                  <  7:1484133‑M1/151‑4 (MQ=255)

     ttCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgt                                                                                                                                                  >  3:1435917‑M1/1‑146 (MQ=255)

     ttCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATCCAGCGAAACCAAtgta                                                                                                                                                 <  8:1395347‑M1/150‑5 (MQ=255)

      tCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtag                                                                                                                                                <  7:905362‑M1/150‑6 (MQ=255)

      tCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtct                                                                                                                                                  >  6:1539555‑M1/1‑145 (MQ=255)

              tGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataact                                                                                                                                       >  4:993067‑M1/1‑137 (MQ=255)

               gACGCTCGCCCATTTCATTGACAGCGTACCAGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataac                                                                                                                                        <  5:477419‑M1/149‑14 (MQ=255)

                ccgCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtc                                                                                                                                     <  3:1199363‑M1/150‑17 (MQ=255)

                aCGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtc                                                                                                                                     <  1:1056384‑M1/151‑17 (MQ=255)

                   cTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctg                                                                                                                                  >  2:1394796‑M1/1‑132 (MQ=255)

                     ctcccatTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctg                                                                                                                                  <  4:1207575‑M1/147‑20 (MQ=255)

                       cccATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaaca                                                                                                                              <  4:493091‑M1/151‑24 (MQ=255)

                          aTTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaat                                                                                                                           <  5:294953‑M1/151‑27 (MQ=255)

                            ttCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctaaacaaatt                                                                                                                          <  7:187520‑M1/150‑28 (MQ=255)

                             tCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCATTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtactgaacaaattgt                                                                                                                        >  8:907350‑M1/1‑122 (MQ=255)

                             tCATTGACAGATTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACGAAtgtagaaaataacgtcctgaacaaattg                                                                                                                         <  8:1489292‑M1/150‑29 (MQ=255)

                                 tGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcca                                                                                                                     <  8:161733‑M1/150‑33 (MQ=255)

                                  gACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccata                                                                                                                   <  4:1131082‑M1/151‑35 (MQ=255)

                                   aCAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataa                                                                                                                  <  5:224336‑M1/151‑36 (MQ=255)

                                     aGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataata                                                                                                                <  7:389227‑M1/151‑38 (MQ=255)

                                     aGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataata                                                                                                                <  1:682307‑M1/151‑38 (MQ=255)

                                      gCGTACCGTTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatat                                                                                                               <  1:445551‑M1/151‑39 (MQ=255)

                                       cGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatatt                                                                                                              <  5:630585‑M1/151‑40 (MQ=255)

                                          aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                            >  7:287240‑M1/1‑109 (MQ=255)

                                          aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                            <  5:1498336‑M1/150‑42 (MQ=255)

                                          aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                            >  8:738509‑M1/1‑109 (MQ=255)

                                          aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattac                                                                                                            >  3:942703‑M1/1‑109 (MQ=255)

                                            cGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaat                                                                                                         >  7:1137065‑M1/1‑107 (MQ=255)

                                              gTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaatt                                                                                                        >  6:1198108‑M1/1‑105 (MQ=255)

                                                aaTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatc                                                                                                     <  1:728777‑M1/151‑49 (MQ=255)

                                                 aTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatcc                                                                                                    <  8:675141‑M1/151‑50 (MQ=255)

                                                      tGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagt                                                                                               >  6:223180‑M1/1‑97 (MQ=255)

                                                      tGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagt                                                                                               >  4:1473684‑M1/1‑97 (MQ=255)

                                                       gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGATAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgca                                                                                                 <  2:1296387‑M1/148‑53 (MQ=255)

                                                       gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcag                                                                                                <  6:131385‑M1/149‑54 (MQ=255)

                                                       gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcag                                                                                                <  1:905967‑M1/149‑54 (MQ=255)

                                                        tAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtg                                                                                              <  6:458042‑M1/150‑56 (MQ=255)

                                                          gCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttg                                                                                           >  7:480550‑M1/1‑93 (MQ=255)

                                                           cAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgc                                                                                          >  3:159321‑M1/1‑92 (MQ=255)

                                                            aaaagcaatacctaataaaATCAAAT‑AATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgctt                                                                                        <  5:1287423‑M1/142‑62 (MQ=255)

                                                             aTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatcagcagtgttgctt                                                                                        >  5:136369‑M1/1‑90 (MQ=255)

                                                              tAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttc                                                                                       >  5:860332‑M1/1‑89 (MQ=255)

                                                              tAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttc                                                                                       >  8:426152‑M1/1‑89 (MQ=255)

                                                               aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttct                                                                                      >  6:1027969‑M1/1‑88 (MQ=255)

                                                               aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttc                                                                                       <  4:1573581‑M1/150‑63 (MQ=255)

                                                                   aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtc                                                                                  <  4:280064‑M1/151‑68 (MQ=255)

                                                                      ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatc                                                                               >  5:370234‑M1/1‑81 (MQ=255)

                                                                      ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatc                                                                               <  4:799491‑M1/151‑71 (MQ=255)

                                                                        taataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgc                                                                             >  2:783019‑M1/1‑79 (MQ=255)

                                                                         aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcg                                                                              <  4:954807‑M1/149‑72 (MQ=255)

                                                                         aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcg                                                                              <  1:1008730‑M1/149‑72 (MQ=255)

                                                                          ataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgg                                                                           <  4:1051452‑M1/151‑75 (MQ=255)

                                                                           taaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgg                                                                           >  8:1016359‑M1/1‑76 (MQ=255)

                                                                            aaaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgga                                                                          <  3:452839‑M1/150‑76 (MQ=255)

                                                                              aaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaactaattgtccataatattacaattatccgcagtgttgcttgtcgtcttcgcggatga                                                                       <  4:533475‑M1/151‑79 (MQ=255)

                                                                               aTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatcggcagtgttgcttctcgtcatcgcggatgat                                                                      >  2:1087251‑M1/1‑72 (MQ=255)

                                                                               aTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgat                                                                      >  2:869401‑M1/1‑72 (MQ=255)

                                                                                 ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgata                                                                     <  5:789762‑M1/150‑81 (MQ=255)

                                                                                 ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgata                                                                     >  4:383363‑M1/1‑70 (MQ=255)

                                                                                  cAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataat                                                                   <  5:1091619‑M1/151‑83 (MQ=255)

                                                                                      aaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                               <  6:1075099‑M1/151‑87 (MQ=255)

                                                                                        atatACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcct                                                             <  1:1463933‑M1/151‑89 (MQ=255)

                                                                                              aTTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCTCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtag                                                       <  6:304097‑M1/151‑95 (MQ=255)

                                                                                                 gTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                    <  7:1310927‑M1/151‑98 (MQ=255)

                                                                                                   ccTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttga                                                   <  6:655112‑M1/150‑99 (MQ=255)

                                                                                                    cTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaac                                                 >  8:807278‑M1/1‑51 (MQ=255)

                                                                                                         ccTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacac                                               <  8:1075229‑M1/148‑103 (MQ=255)

                                                                                                         ccTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcgcatgataattgtcctcggtagtagaacacgcc                                            >  3:798374‑M1/1‑46 (MQ=255)

                                                                                                          cTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcct                                           >  6:795423‑M1/1‑45 (MQ=255)

                                                                                                               agagAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgattt                                      >  2:537924‑M1/1‑40 (MQ=255)

                                                                                                                 agaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgt                                    <  2:258210‑M1/151‑114 (MQ=255)

                                                                                                                  gaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgatagttgtcctcggtagttgaacacgcctgatttgt                                    >  6:1422635‑M1/1‑37 (MQ=255)

                                                                                                                   aaTTATTTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgttaattgtcctcggtagttgaacacgcctgatttgtat                                  <  3:240105‑M1/151‑116 (MQ=255)

                                                                                                                      tattTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                               >  7:1016310‑M1/1‑33 (MQ=255)

                                                                                                                       attTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                               <  1:1222841‑M1/150‑119 (MQ=255)

                                                                                                                       attTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                               <  6:907766‑M1/150‑119 (MQ=255)

                                                                                                                       attTTAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                               <  7:577840‑M1/150‑119 (MQ=255)

                                                                                                                        ttttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                               >  3:613124‑M1/1‑31 (MQ=255)

                                                                                                                         tttAATTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatag                             <  2:985795‑M1/150‑121 (MQ=255)

                                                                                                                            aaTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataccgtcctgaacaaattggccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                          <  8:131132‑M1/150‑124 (MQ=255)

                                                                                                                             aTTTTCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattctccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtaggtgaacacgcctgatttgtctcatagcttaa                        <  3:1048268‑M1/151‑126 (MQ=255)

                                                                                                                                ttCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtcgataatatttcaattatccgcactgttgcttctcgtcatcccggatgataaatgtcctcggtagttgaacacgcctgaattgtatcatagctaaaga                      >  1:1264042‑M1/1‑23 (MQ=255)

                                                                                                                                ttCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                      <  8:300956‑M1/150‑128 (MQ=255)

                                                                                                                                ttCGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                      <  2:635295‑M1/150‑128 (MQ=255)

                                                                                                                                  cGCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatt                   >  6:393553‑M1/1‑21 (MQ=255)

                                                                                                                                   gCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatta                  <  3:1382606‑M1/151‑132 (MQ=255)

                                                                                                                                   gCTTAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatta                  <  5:566764‑M1/151‑132 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact               >  7:690709‑M1/1‑17 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaact               >  7:1221217‑M1/1‑17 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaac                <  4:226137‑M1/150‑134 (MQ=255)

                                                                                                                                      tAATTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaa                 <  1:356628‑M1/149‑133 (MQ=255)

                                                                                                                                        aTTCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactc              >  2:317770‑M1/1‑15 (MQ=255)

                                                                                                                                         ttCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaagtca             >  1:288167‑M1/1‑14 (MQ=255)

                                                                                                                                          tCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaa            <  6:181311‑M1/150‑138 (MQ=255)

                                                                                                                                          tCAGCGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaa            <  6:732604‑M1/150‑138 (MQ=255)

                                                                                                                                              cGAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatat       <  5:1166544‑M1/151‑143 (MQ=255)

                                                                                                                                               gAAACCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatt      <  2:429485‑M1/151‑144 (MQ=255)

                                                                                                                                                 aaCCAAtgtagaaaataacgtcctgaacaaattgtccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatttt    <  3:758351‑M1/151‑146 (MQ=255)

                                                                                                                                                   ccAAtgtagaaaataacgtcctgaacaaattggccataatattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttca  <  7:829155‑M1/151‑148 (MQ=255)

GCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATT  >  NC_000913/1673406‑1673703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`