BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,557	Δ120 bp	intergenic (‑56/‑237)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673557	1673676	120	426 [0]	[0] 424	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673556	0 (0.000)	418 (1.000)	221/296	0.0	100%	intergenic (‑55/‑357)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673677 =	0 (0.000)	418 (1.000)	221/296	0.0	100%	intergenic (‑176/‑236)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 424 total aligned reads displayed.

TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673528‑1673826

catttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaatt                                                                                                                                                      >  8:37821‑M2/150‑150 (MQ=255)

 atttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  1:278726‑M2/149‑151 (MQ=255)

 atttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     <  3:1362707‑M2/3‑1 (MQ=255)

   ttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  8:1240548‑M2/147‑149 (MQ=255)

   ttccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGt                                                                                                                                                     >  2:952918‑M2/147‑149 (MQ=255)

    tccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAg                                                                                                                                                   <  2:621753‑M2/5‑1 (MQ=255)

     ccctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGa                                                                                                                                                  >  2:1623205‑M2/145‑150 (MQ=255)

       ctcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGaaa                                                                                                                                                >  4:18245‑M2/143‑150 (MQ=255)

        tcactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAAt                                                                                                                                              >  5:1264704‑M2/142‑151 (MQ=255)

         cactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAAt                                                                                                                                              >  4:1032838‑M2/141‑150 (MQ=255)

         cactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATa                                                                                                                                             <  5:421903‑M2/11‑1 (MQ=255)

         cactgacgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATa                                                                                                                                             <  2:80908‑M2/11‑1 (MQ=255)

              acgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTc                                                                                                                                        <  5:1229433‑M2/16‑1 (MQ=255)

               cgctcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTcc                                                                                                                                       >  3:206381‑M2/135‑151 (MQ=255)

                  tcgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTg                                                                                                                                     >  1:591179‑M2/132‑150 (MQ=255)

                   cgcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGaa                                                                                                                                   <  8:796204‑M2/21‑1 (MQ=255)

                   cgcccatttcaatgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGaa                                                                                                                                   <  6:825859‑M2/21‑1 (MQ=255)

                    gcccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAAc                                                                                                                                  <  1:1292146‑M2/22‑1 (MQ=255)

                    gcccatttcattgacagagtaccggtaatttctgtagcaatagcgagacataataaaatccaataaatatacattgtccttctcctccaagagaattattttaatattctcttaattcagctaaaccaaTCTATAAAATAACGTCCTCAAc                                                                                                                                  >  6:949340‑M2/130‑151 (MQ=255)

                     cccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACa                                                                                                                                 <  7:1268121‑M2/23‑1 (MQ=255)

                      ccatttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACaa                                                                                                                                <  7:601685‑M2/24‑1 (MQ=255)

                          ttcattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAAtt                                                                                                                             <  2:1423575‑M2/27‑1 (MQ=255)

                            cattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGt                                                                                                                           <  4:551601‑M2/29‑1 (MQ=255)

                            cattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGt                                                                                                                           <  8:1118997‑M2/29‑1 (MQ=255)

                            cattgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTc                                                                                                                          >  8:523881‑M2/122‑151 (MQ=255)

                             attgacagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTcc                                                                                                                         >  1:879105‑M2/121‑151 (MQ=255)

                                 acagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACTTCCTGAACAAATTGTCCata                                                                                                                      >  5:694612‑M2/117‑150 (MQ=255)

                                  cagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCataat                                                                                                                    >  1:986596‑M2/116‑151 (MQ=255)

                                  cagcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCataat                                                                                                                    >  6:1479395‑M2/116‑151 (MQ=255)

                                   ttaggtctggctatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACa                                                                                                                                 <  1:194835‑M2/23‑1 (MQ=255)

                                    gcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAatat                                                                                                                  <  4:819985‑M2/38‑1 (MQ=255)

                                    gcgtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAatat                                                                                                                  <  2:1471409‑M2/38‑1 (MQ=255)

                                      gtaccggtaatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATAtt                                                                                                                 >  3:1014111‑M2/112‑150 (MQ=255)

                                             taatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTAt                                                                                                         >  1:739850‑M2/105‑151 (MQ=255)

                                              aatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTAt                                                                                                         <  4:1555207‑M2/47‑1 (MQ=255)

                                              aatttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATc                                                                                                        <  5:1360131‑M2/48‑1 (MQ=255)

                                               atttctgtagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATcc                                                                                                       >  6:354670‑M2/103‑151 (MQ=255)

                                                      tagcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtgt                                                                                                >  1:1627047‑M2/96‑151 (MQ=255)

                                                       agcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGtt                                                                                               <  2:174589‑M2/57‑1 (MQ=255)

                                                        gcaatagccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTg                                                                                              >  1:1052080‑M2/94‑151 (MQ=255)

                                                            tagccagacctaataaaatccaataaatatacattgtcgttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtc                                                                                          >  8:594987‑M2/90‑151 (MQ=255)

                                                             agccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtct                                                                                         <  7:1320598‑M2/63‑1 (MQ=255)

                                                             acccagacctaataaaatccaataaatatagattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtc                                                                                          <  6:613024‑M2/62‑1 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCttctct                                                                                       >  8:1644236‑M2/87‑150 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       <  8:878155‑M2/65‑1 (MQ=255)

                                                               ccagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCg                                                                                       >  2:305818‑M2/87‑151 (MQ=255)

                                                                cagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGt                                                                                      >  3:909161‑M2/86‑151 (MQ=255)

                                                                cagacctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGt                                                                                      >  3:1524863‑M2/86‑151 (MQ=255)

                                                                    cctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATc                                                                                  >  3:588756‑M2/82‑151 (MQ=255)

                                                                    cctaataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATc                                                                                  <  4:765570‑M2/70‑1 (MQ=255)

                                                                       aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgcg                                                                               >  3:1088999‑M2/79‑151 (MQ=255)

                                                                       aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcgc                                                                                <  7:513431‑M2/72‑1 (MQ=255)

                                                                       aataaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcg                                                                                 <  8:720947‑M2/71‑1 (MQ=255)

                                                                          aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgat                                                                            >  6:159647‑M2/76‑151 (MQ=255)

                                                                          aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGgat                                                                            <  7:1178096‑M2/76‑1 (MQ=255)

                                                                          aaaatccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGga                                                                             <  8:1024079‑M2/75‑1 (MQ=255)

                                                                               ccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATaa                                                                       <  4:958341‑M2/81‑1 (MQ=255)

                                                                               ccaataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATa                                                                        <  7:390518‑M2/80‑1 (MQ=255)

                                                                                  ataaatatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTg                                                                    <  4:1238664‑M2/84‑1 (MQ=255)

                                                                                      atatacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCt                                                                <  1:379816‑M2/88‑1 (MQ=255)

                                                                                        atacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAACATACCGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTc                                                               <  6:429549‑M2/89‑1 (MQ=255)

                                                                                        atacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTc                                                               <  7:165394‑M2/89‑1 (MQ=255)

                                                                                        atacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTc                                                               <  6:732407‑M2/89‑1 (MQ=255)

                                                                                        atacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTc                                                               <  2:907026‑M2/89‑1 (MQ=255)

                                                                                        atacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCg                                                              <  5:530619‑M2/90‑1 (MQ=255)

                                                                                         tacattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGCATGATAATTGTCCTCgg                                                             >  2:1170498‑M2/61‑151 (MQ=255)

                                                                                          acattgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGt                                                            >  8:1400242‑M2/60‑151 (MQ=255)

                                                                                            attgtccttctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGt                                                            >  2:1559295‑M2/58‑149 (MQ=255)

                                                                                                     ctcctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCATCGGTAGTtgaaaa                                                   >  6:1282184‑M2/49‑147 (MQ=255)

                                                                                                       cctgcaagagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGcc                                               >  2:37575‑M2/47‑151 (MQ=255)

                                                                                                             agagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAttt                                         <  6:467436‑M2/111‑1 (MQ=255)

                                                                                                              gagaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTg                                        <  7:889663‑M2/112‑1 (MQ=255)

                                                                                                               agaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGt                                       >  1:1505359‑M2/39‑151 (MQ=255)

                                                                                                               agaattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGt                                       <  8:323417‑M2/113‑1 (MQ=255)

                                                                                                                 aattattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTAt                                     <  5:1446530‑M2/115‑1 (MQ=255)

                                                                                                                  attattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTAt                                     >  8:257726‑M2/36‑150 (MQ=255)

                                                                                                                  attattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATc                                    <  1:1140292‑M2/116‑1 (MQ=255)

                                                                                                                  attattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTCTAt                                     >  7:82615‑M2/36‑150 (MQ=255)

                                                                                                                    tattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCa                                   <  7:1490019‑M2/117‑1 (MQ=255)

                                                                                                                    tattttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCa                                   <  4:382778‑M2/117‑1 (MQ=255)

                                                                                                                       tttaattttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGc                               >  2:514694‑M2/31‑151 (MQ=255)

                                                                                                                             tttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            >  3:542962‑M2/25‑148 (MQ=255)

                                                                                                                             tttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTa                            >  5:788551‑M2/25‑148 (MQ=255)

                                                                                                                             tttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATACGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATATCTTa                            >  1:507028‑M2/25‑148 (MQ=255)

                                                                                                                              ttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTGCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGa                         >  6:1662355‑M2/24‑150 (MQ=255)

                                                                                                                              ttcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATAATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGa                         <  5:902164‑M2/127‑1 (MQ=255)

                                                                                                                               tcgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGaa                        <  6:860395‑M2/128‑1 (MQ=255)

                                                                                                                                cgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAtt                      <  3:785688‑M2/130‑1 (MQ=255)

                                                                                                                                cgcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAt                       <  2:842393‑M2/129‑1 (MQ=255)

                                                                                                                                 gcttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAAtt                      >  5:166281‑M2/21‑150 (MQ=255)

                                                                                                                                   ttaattcagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAAc                   >  8:750559‑M2/19‑151 (MQ=255)

                                                                                                                                      attcagcgaaaccaaTGTAGAAAATAACCTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGAGGATAATTGTCCTCGGTAGTTGAACACGCCAGATTTGTATCATAGCTTAATAATTaacac                 >  5:1517793‑M2/16‑148 (MQ=255)

                                                                                                                                         cagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaa              <  7:671371‑M2/138‑1 (MQ=255)

                                                                                                                                         cagcgaaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaa              <  6:114479‑M2/138‑1 (MQ=255)

                                                                                                                                              aaaccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATAttt        <  3:333184‑M2/144‑1 (MQ=255)

                                                                                                                                                accaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGGAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTc      <  6:1060671‑M2/146‑1 (MQ=255)

                                                                                                                                                 ccaaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCTTAGCTTAAGAATTAACTCAAAATATTTTCa     <  3:1478746‑M2/147‑1 (MQ=255)

                                                                                                                                                   aaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACt   >  4:250758‑M2/3‑151 (MQ=255)

                                                                                                                                                   aaTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACt   >  4:1411047‑M2/3‑151 (MQ=255)

                                                                                                                                                    aTGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACtt  <  5:1032737‑M2/150‑1 (MQ=255)

TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT  >  NC_000913/1673528‑1673826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`