BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2357690	304 (0.650)	75 (0.180) +AATTAGAAGGTT	45/276	32.4	21.2%	coding (787/900 nt)	yfaD	transposase_31 family protein
*	?	NC_000913	2357691 =	304 (0.650)	75 (0.180) +AATTAGAAGGTT	45/276	32.4	21.2%	coding (788/900 nt)	yfaD	transposase_31 family protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 115 total aligned reads displayed.

TAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2357542‑2357690

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTT  >  NC_000913/2357691‑2357739

                                                                                                                                                     ||||||||||||

gtATTATCTGGTCGAATTCGGCGATAGCTGCCGGTTCACACGTTTTATTGCTGAGATTGACTAACGTTCAGCACTAAAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAA                                                             <  7:304387/149‑1

TAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAA                                                              >  5:1861254/1‑150

TAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAA                                                              >  7:147460/1‑150

TAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAA                                                              <  8:1322613/150‑1

 atTTATCTGGTGGATTGCGGGGATACGTCCCGTTTCACACGTTTTATTGATGAGATTGAGGTACGTTCACCTCTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAA                                                             <  8:1586988/148‑1

 AATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAAT                                                            <  3:1592365/151‑1

  ATTATCTGCTGGATTTCGGAGATACCTCCCGTTTGACCCGTTTTATTGAGGAGATTGCCGAACGGTCACCTCTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATT                                                           <  8:164008/151‑1

  ATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATT                                                           >  8:1018838/1‑151

  ATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAAa                                                            >  4:306660/1‑149

  ATTAGCAGCTGGAATGCGGCGATACCTCCCGTTTGACCCGTTTTCTTCATGAGAGTGCCGAACGTTCAGGACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATT                                                           <  7:971347/151‑1

    TATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATT                                                           >  8:780639/1‑149

     ATCTGCTGCAATGCGGCGATAGCTCCCGTTTCACCCGTTTTATTGATGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAG                                                         <  5:1018008/150‑1

     ATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCAGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAG                                                         <  7:1491803/150‑1

      gttccgatgttgaGGCGATACCTCGCGTTTCACCCGTTTTATTTAGGAGATTGCGGTACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAA                                                       <  1:56775/138‑1

      TCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATTTTAGA                                                        >  5:200163/1‑150

      TCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGA                                                        >  2:1016711/1‑150

      TCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAA                                                              >  8:1459609/1‑144

       CTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGA                                                        >  5:1408861/1‑149

       CTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTAGA                                                        >  4:919420/1‑149

         ggTGCAATTCGGCGATACGTTCCGTTTGACACGTTTTATTGATGAGATTGCCGAACGTTCACGACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTAGAA                                                       <  2:1219332/146‑1

         gctgaatttCGGCGATACCTCCCGTTCCACACGCTTTATTCAGGATATTGACCAACGTTCAACACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGG                                                     <  3:265032/141‑1

         GCTGGAATGAGGCGATACCTCGCGTTTCACCCGTTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAA                                                       <  6:1266560/148‑1

         GCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTAGA                                                        <  4:959395/147‑1

         GCTGCAATGCGGAGATACCTCCCGTTTGACCCGTTTTATTGATGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGG                                                     <  8:1050833/150‑1

          tccgttctCGGTGATACCTGGCGTTGCACCCGTTTTATTTAGGAGAGTGCCGAACGTTCAGCACTTCAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGT                                                    <  6:27766/142‑1

          gTGCTATGAGGCGATACCTCCCGTTTCACCAGTTTAATTCAGGAGAGTGCCGATCGTTCACCTCTTCAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTT                                                   <  5:741112/150‑1

          gTGCAATGCGGCGATACCTCCCGTTTCACCAGTTTTATTGAGGAGATTGCTGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTT                                                   <  4:1772474/150‑1

           gGCAATGCGGCGATACGTCCCGGTGCACCCGTGTTATTGAGGATAGTGCCGAACGTTCACCTCTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTCCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTT                                                  <  8:580039/150‑1

           TGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGGCATCAAATTCGCTGGCAGGAAGGTAAATAAGAAGGTTg                                                  >  1:1384922/1‑150

           TGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATAGTAGAAcaat                                                   >  8:1448118/1‑146

           TGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAGTAAGAAGGTTT                                                  >  3:1252960/1‑151

            GCAATTCGGCGATACCTCCCGTTTCACCCGGTTTATGGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTT                                                  <  5:865276/150‑1

            GCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCTAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTT                                                  <  8:1410533/150‑1

               ATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTCCGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCAT                                              >  7:1132310/1‑151

               ATGCGGCGATACCTCCCGTGTCACCCGTTTTATTGATGATATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCAT                                              <  1:1012825/151‑1

                TGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTCCGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAA                                                       >  2:56957/1‑141

                  CGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAA                                           <  5:779889/151‑1

                  CGGCGATACCTCCCGTTTCACACGTTTTATTGAGGAGATTGCCTAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAA                                           <  6:1256825/151‑1

                   GGCGATAGCTCCCGTTTCACCCGTTTTATTAAGGAGATTGCAGAACGTTCACCACTTCAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTATAAGGTTTGCATGAAC                                          <  2:1392694/151‑1

                     CGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAA                                        <  4:148073/151‑1

                      GATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAA                                        <  2:1467711/150‑1

                      GATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGAATGAACAA                                        >  1:1459444/1‑150

                       ATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAAC                                          <  5:1079872/147‑1

                       ATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGAATGAAC                                          >  8:1080623/1‑147

                       ATAACTCCCGGTTGACCCGCTTTATTTATGATCTTGAACAACCTTCACCACAACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGC                                      <  5:88606/151‑1

                          CCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGATTGAAGGTGAGAATGAAAAAGCGAT                                   >  1:1481460/1‑151

                          CCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTCCATGAACAAGCCAT                                   >  4:1041870/1‑151

                           CTCGCGTTTCACACGTTTTATTGAGGAGATTGCGGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTG                                                 <  7:1446298/136‑1

                           CTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGATTGagatctgaagatatt                                  >  4:1456698/1‑136

                            tcgCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAG                                                         <  8:1697901/124‑1

                            gcgCGTTTGACCAGTTTTATTGATGATAGTGAAGATCGTTCACCTCTAAAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTA                                 <  7:823052/148‑1

                            TCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAG                                                         >  5:1694962/1‑127

                             tCCGGTTCACAAGTTTTATTTATGAGATTTACTTACCTTCATCTCTACAAAAGGAGAGATTAATGACTATTTCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGTAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTA                                 <  2:122040/149‑1

                             CCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCAgatctgaagagagac                                >  2:1717159/1‑136

                             CCCGTTGCACCAGTCATATTCCGGAGATTGCCCAACGTTCCTCACAACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATT                                  <  4:1526173/149‑1

                             CCCGGTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAA                                <  7:915300/151‑1

                              CCGTTTGACAAGATTTATTGATGATATTGAAGTACGTTCAGCTCTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAA                               <  5:4139/151‑1

                               CGTTTCACCCGTTTTATTTAGGATTTTGATGATCCTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAA                              <  8:1865697/151‑1

                                GTTTGACCCGTTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAAT                             <  7:597552/151‑1

                                 TTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTA                                                          >  1:779084/1‑121

                                  tctaccaggTTTATTGAGGATATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATT                            <  1:360146/141‑1

                                  tctACCCGTGTTATTGAGGATATTGACGATCGTTAACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATT                            <  3:1223555/147‑1

                                  TTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTG                                                 >  3:86195/1‑129

                                  TTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTAGAATGAAAAAGCCATTAAAAT                             >  4:601262/1‑149

                                  TTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGAATGAAAAAGCCATTAAAAT                             >  4:609782/1‑149

                                  TTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAAAAAGAAGGT                                                    >  2:1852367/1‑126

                                  TTCACAAGTTTTATTGATGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTG                                                 <  6:86070/129‑1

                                   tcacaagccTTATCGAGGAGATTGACGAACCTTCACCACAACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTG                           <  1:520237/141‑1

                                   TCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAAC                                          >  2:791908/1‑135

                                    ccatctTTTTATTGATGATTTTGATGATCCTTCAGCACAACAAAATGAGAGATTAATGAATATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCATGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCT                         <  6:229169/145‑1

                                    CACCCGTTTTATTGAGGAGATTGCCGTACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAA                                                       <  1:749117/121‑1

                                    CACACGGTTTATTGAGGAGATTGACGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAA                                        <  5:860732/136‑1

                                     accccccttatcccGGAGATTGCCGAACCGACAGCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTCTGCATGAACAAGCCATTAAAATTGCTT                        <  3:1292610/137‑1

                                     ACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAATTTAGAAGGTTTGATTGAACATGCAATTAAAATT                            >  2:361868/1‑147

                                     ACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATAAGAAGATTAGAATGAAAAAGCAATTAAAATT                            >  6:1227213/1‑147

                                      cccctgTTATTGAGGAGATTGCCGAACCTACAGCACAACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTT                       <  5:1116714/145‑1

                                        tgttttctgtcGGAGTTTGCAGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTTAACGGCTTCGGCAGGAAGTACATCAAATTGGCTCGCAGGAAGGTACATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTG                      <  1:1541156/139‑1

                                        CGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCA                                               <  1:530318/125‑1

                                        CGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCA                                               >  2:534340/1‑125

                                         GTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAAGAAGAACCAGGCCATGAAAAAGCAATTAAAATTCCTg                        >  2:1549134/1‑146

                                           gTTATTCAGGAGATTGCCTAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGA                                            <  5:920725/124‑1

                                              ATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAA                                           <  2:1062300/123‑1

                                              ATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATAGTAGAAGAATACAATAAACTAGCAATTAAAATTGATTAGCTCAgg                >  6:1126552/1‑148

                                              ATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAA                                           >  1:1057506/1‑123

                                               TTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGCCATCAAATTGACTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGC                                      >  2:726907/1‑127

                                                 gggtgctcttaCGATCGTTAATCACTTCAAAAGGAGAGATTAATGACTATTGCTGACCGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGG            <  3:432281/140‑1

                                                  AGGAGTGTGACGAACCTTCAGCACAACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGG            <  3:1122979/150‑1

                                                           acttACGTTCAGCACAACAAAAGGATAGATTAATGACTATTTCTGAACGGATTCGGCAGGAAGGACATCAATTTGGCTTGCATGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTT  <  3:260968/147‑1

                                                             GAACGTTCACCACTAAAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATG                <  7:850225/135‑1

                                                              AACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAATTTAGAAGGTTTCCATGAACAAGCAATTA                                 >  1:694045/1‑117

                                                                 GTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACA                                         <  8:1263481/106‑1

                                                                 GTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACA                                         >  5:1262644/1‑106

                                                                  TTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAAGTAGAAGGTTTGCATGAACta                                        >  3:857074/1‑104

                                                                   tccCCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAAT                             <  5:1854419/113‑1

                                                                               AAGGAGAGATTAATGACTATTGCTGAACGGCTCCGGCAGGAAGGCCATCAAATTGGCTGGCAGGAAGGTAAAGTAGAAGGTTTGAATGAACAAGCCAT                                   >  5:438805/1‑98

                                                                                AGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGA                                            >  6:1486526/1‑88

                                                                                         TAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATATTAGAAGGTTTGAATGAACAAGCga                                    >  1:1048542/1‑85

                                                                                         TAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGAATGAACAAG                                       >  3:1267901/1‑84

                                                                                             GACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAAaa                                         >  8:1205485/1‑76

                                                                                              ACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTT                                                  >  8:1497406/1‑68

                                                                                                                                                     ||||||||||||

TAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2357542‑2357690

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTT  >  NC_000913/2357691‑2357739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.