| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2622492 = | 87 (0.550) | 3 (0.020) | 3/126 | 14.6 | 3.9% | coding (1429/2067 nt) | ppk | polyphosphate kinase |
| ? | NC_000913 | 2622504 = | 75 (0.560) | coding (1441/2067 nt) | ppk | polyphosphate kinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACCATTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGCGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2622578‑2622492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgcgcatcACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTA > NC_000913/2622504‑2622578 TACCATTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTG > 1:3288462/1‑76TACCATTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTG > 2:2627708/1‑76 ATTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGC > 2:5140413/1‑76 TTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCG > 2:941474/1‑76 TTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCG > 1:3218302/1‑76 TAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGC < 1:1436747/76‑1 TAAATAATCAAATGTCACAGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGAGGCGa > 1:3980510/1‑75 AAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGCG > 1:494097/1‑76 ataAATCAATTGCCACCGGACGGTAGGGGTTTTCAATAACGTTAATTCCCCGCCGTACTTCGTTGGTGATGCGCGC < 2:1905489/73‑1 ATAATCAAATGGCACGGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGCGCA < 2:4011598/76‑1 aAATCAAATGTCACCGGACGGTATGGGTTTTCAAAAAAGTTAAATCCCCGCCGTACTTCGTTGGTGATGCGCGCAT < 1:616238/75‑1 AATCAAATGTCACCGGACGGTATGGTTTTTCAATAAAGTTAAATCCCCGCCGTACTTCGTTGGTGATGCGCGCATC < 1:2163857/76‑1 CACCGGCCGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGCGCATCACCAACGAAG < 2:4895915/76‑1 CGGTATGGGTTTTCAATAAAGTTAAATCCCCGCCGTACTTCGTTGGTGATGCGCGCATCACCAACGAAGTACGG < 2:343853/74‑1 CCGTACTTCGTTGGTGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCG < 1:343853/74‑1 gcgGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTG < 2:4688066/73‑1 GATGCGCGCATCACCAACGAAGTACGGCGGGTCTTTTACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATT > 2:1253482/1‑76 GATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATT < 2:4341848/76‑1 GCGCGCATCACCAACGAAGTACGGCGCGTATTTAACTTTATTGAAAACCCATACCCTCCGGTGACACTTGATTATT > 2:1844990/1‑76 CGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTT < 1:4547935/76‑1 GCATCACCAACGAAGTACGGCGGGTATTTTACTTTATTGTAAACCCATACCGTACGGTGGCACTTGATTATTTAAT > 1:4656600/1‑76 CATCATCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATG > 2:5087229/1‑76 CATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATG < 2:1317011/76‑1 ATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGG < 2:3879143/76‑1 TCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGT < 1:2818341/76‑1 CACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTA < 1:507628/76‑1 CACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTA < 2:5021857/76‑1 TACCATTAAATAATCAAATGTCACCGGACGGTATGGGTTTTCAATAAAGTTAAATACCCGCCGTACTTCGTTGGTGATGCGCGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2622578‑2622492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcgcgcatcACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTA > NC_000913/2622504‑2622578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |