| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3349258 = | 18 (0.110) | 117 (0.740) | 70/150 | 1.0 | 86.7% | coding (1403/2331 nt) | arcB | aerobic respiration sensor‑response protein |
| ? | NC_000913 | = 3349263 | NA (NA) | coding (1398/2331 nt) | arcB | aerobic respiration sensor‑response protein | |||||
Only 100 of 117 total aligned reads displayed.
GATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3349328‑3349258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < NC_000913/3349263‑3349189 GATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCG < 2:1094008/76‑1 ATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCCCCCGCACCcg > 2:4592047/1‑74 TGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAAACCGCCACCCGCACCcgg > 1:2905698/1‑73 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTA < 1:3290391/76‑1 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAAACCGCCCCCCGCACCGGga > 1:4477216/1‑74 AGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTAT < 2:4745678/76‑1 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGTCGGTAAACCTGCCACCGGCCCCGGTATT < 1:5130536/76‑1 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATa < 1:4915999/76‑2 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATT < 1:545290/76‑1 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATT < 2:183843/76‑1 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGCCATGGCGGTCAACCCCCCCCCCGCACCGGTgac > 2:612338/1‑73 CTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTG < 1:2840157/76‑1 GGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGT < 2:3919028/76‑1 GATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTC < 2:1435476/76‑1 gTAAAATTTTCGCCGTGTATTACCAGGGGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCT < 2:2141509/75‑1 ATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTGAAACTGCCCCCCGCACCGGGAGTGGggt > 1:1572033/1‑73 ATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCT < 2:2148861/76‑1 ATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAAACCGCCCCCCGCACCGGGATTGGggt > 1:2516199/1‑73 ATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAAAATGCCCCCGGCCCCGGGAGTGGTCT > 1:1625136/1‑76 AAAATTTTCGCCATGTATTGCCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG < 1:1293436/76‑1 AATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CC < 1:3837664/76‑1 AATTTTCGCCATGTATTACCAGGTGAAAGACAGGCATGGCGGTAAGCCTGCCACCGGCACCGGTATTGGTCTGG‑Cg < 2:4714687/76‑2 TTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGT < 1:3672929/76‑1 TTTTGCCAGTTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTT < 2:4854714/76‑1 TTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTT < 1:3337412/76‑1 TCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTC < 1:1665473/76‑1 CGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCT < 2:1349946/76‑1 CGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCT < 2:215597/76‑1 GCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTC < 1:4531104/76‑1 GCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTC < 2:3087423/76‑1 CCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAACCTGCCCCCCGCACCGGGATTGGGCTGG‑CCGGTTCTag > 1:118483/1‑74 CATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCCCCCGCCCCCGTATTGGTCTGGCCCGTTTCTCc > 2:1515257/1‑75 CATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCCCCCGCACCGGGCTTGGGCTGG‑CCGGTTCTCGT > 1:1770077/1‑76 CATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCACCCGCACCGGGATTGGTCTGG‑CCGGTTCTCGT > 1:5790068/1‑76 CATGTATTACCAGGTGAAAGACAGTCACGGCGGTACACCTGCGACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGT < 1:81392/76‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTC < 1:2907664/76‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTC < 1:1025104/76‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGGATTTGTCTGG‑CCGGTTCTTGTt > 1:5528002/1‑75 ATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCT < 2:2952713/76‑1 TTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTG < 2:5467253/76‑1 TACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGG < 1:5448213/76‑1 ACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGC < 1:900037/76‑1 AGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAA < 1:3233469/76‑1 GTGAAAGACAGTCATGGCGGTAAACCGGCCACCGGCGCCGGTAGTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAA < 2:3905957/76‑1 TGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAA < 2:4600884/76‑1 GAAAGACAGTCATGGCGGTAAACCCGCCCCCCGCCCCGGTATTGGTCTGG‑CCGTTTTTCGTCCTCTGGCGGAAAAa > 2:1517722/1‑75 AAAGACAGTCATGGCGGTAAACCTGCCACCGGCAGCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATA < 2:285936/76‑1 AGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATG < 2:2566654/76‑1 ACAGTCATTGCGGTCATCTGGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGG < 1:875597/76‑1 ACAGTCAGGTGGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGG < 2:4070770/76‑1 CAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGC < 1:3261830/76‑1 AGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCG < 2:654340/76‑1 AGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCG < 2:3834084/76‑1 CATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCG < 1:2600291/76‑1 gTGGCGGGAACCCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGA < 2:1000894/75‑1 ATGGCGGTAAGCCTTGCGCCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGA < 2:2301047/76‑1 ATGGCGGTAAACCTGCCCCCGGCACCGGTATTGGTCTGG‑CCGGTGCTCGTCGTCTGGCGGAAAATATTGGCGGggg > 2:2711397/1‑73 ATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGGAAAAAATGGGGGGggg > 1:445780/1‑73 TGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGAT > 1:875480/1‑76 TGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGAT > 1:5831338/1‑76 TGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGAT < 1:3045623/76‑1 TGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGAT > 1:3179860/1‑76 GGCGGTAAAACTGCCACCGGCACCGGGATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATt > 1:2695538/1‑75 GCGGTAAACCTGCCCCCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATAT < 2:2422852/76‑1 gGGTAAACCGCCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATT < 2:308459/75‑1 GGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTc > 2:4870520/1‑75 GGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTA < 1:337753/76‑1 GGTAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGAGAAAAATATGGGCGGCGATATTA > 2:3807065/1‑76 GTAACCCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTAC < 2:2183842/76‑1 gAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACG < 2:4413406/75‑1 TAAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACG > 1:1404106/1‑76 AAACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCT < 1:3854454/47‑1 AACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGCTCTTACGGT > 2:1029854/1‑76 AACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGT < 2:3179860/76‑1 ACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTT > 1:3635999/1‑76 ACCTGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTT < 2:5611966/76‑1 TGCCGCCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACC < 2:1962427/76‑1 TGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACC > 2:4719171/1‑76 TGCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACC < 1:601034/76‑1 GCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA > 1:2271707/1‑76 GCCACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA > 1:3662289/1‑76 CACCGGCACCGTTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC < 1:663029/76‑1 CACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC < 1:1188099/76‑1 CACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC < 1:5293205/76‑1 CACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC > 1:3135386/1‑76 CACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC > 1:4572191/1‑76 CACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC > 1:3237188/1‑76 ACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCG > 1:2750769/1‑76 ACCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCG < 1:4110660/76‑1 CCGGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGA < 1:1152499/76‑1 CGGCACCGGTATTGGTCTGA‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTGACCAGTGAA > 1:5845200/1‑76 GGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAAC > 1:2746185/1‑76 GGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAAC < 2:3324393/76‑1 GGCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCCGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAAC < 1:1723815/76‑1 GGCACCGGTATTGGTCGGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAAC < 1:478881/76‑1 GCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < 2:4759095/76‑1 GCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < 2:1376251/76‑1 GCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA > 1:1200677/1‑76 GCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < 2:5716253/76‑1 GCACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA > 2:2916168/1‑76 GATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3349328‑3349258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGTATTGGTCTGG‑CCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < NC_000913/3349263‑3349189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |