| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3349258 = | 18 (0.110) | 117 (0.740) | 70/150 | 1.0 | 86.7% | coding (1403/2331 nt) | arcB | aerobic respiration sensor‑response protein |
| ? | NC_000913 | = 3349263 | NA (NA) | coding (1398/2331 nt) | arcB | aerobic respiration sensor‑response protein | |||||
Only 100 of 137 total aligned reads displayed.
TTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCG > NC_000913/3349183‑3349333 | ttacccTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc < 1:4478504/73‑1 (MQ=255)ttGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc > 2:3807395/1‑76 (MQ=255)ttGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc > 2:118483/1‑76 (MQ=255)tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc < 2:4759095‑M1/1‑1 (MQ=255)tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc > 1:1200677‑M1/76‑76 (MQ=255)tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc > 2:2916168‑M1/76‑76 (MQ=255)tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc < 2:1376251‑M1/1‑1 (MQ=255) gttcgctggtaaccgtaatatcgccgcccatatttttcgccggacgacgagaaacggccagaccaataccggtgcc < 1:1723815‑M1/2‑1 (MQ=255) gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgcc > 1:2746185‑M1/75‑76 (MQ=255) ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccg < 2:1137969‑M1/3‑1 (MQ=255) ttcactggtcaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggtcagaccaataccggtgccg > 1:5845200‑M1/74‑76 (MQ=255) gCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCg < 1:4221345/76‑1 (MQ=255) gCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCg < 1:1532558/76‑1 (MQ=255) tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccgg < 1:1152499‑M1/4‑1 (MQ=255) cccTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCgg > 1:3648288/1‑76 (MQ=255) cccTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCgg > 2:3812818/1‑76 (MQ=255) cgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggt < 1:4110660‑M1/5‑1 (MQ=255) cgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggt > 1:2750769‑M1/72‑76 (MQ=255) ccTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGt < 2:2659188/76‑1 (MQ=255) ccTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGt < 1:2028222/76‑1 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg > 1:3135386‑M1/71‑76 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg > 1:3237188‑M1/71‑76 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg > 1:4572191‑M1/71‑76 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg < 1:5293205‑M1/6‑1 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataacggtgccggtg < 1:663029‑M1/6‑1 (MQ=255) cTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCggcg > 2:1722944/1‑74 (MQ=255) cTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg > 1:2485017/1‑76 (MQ=255) cTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg > 2:4043145/1‑76 (MQ=255) cTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg > 2:4252523/1‑76 (MQ=255) tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGc > 1:2271707‑M1/69‑76 (MQ=255) tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGc > 1:3662289‑M1/69‑76 (MQ=255) ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa < 1:601034‑M1/9‑1 (MQ=255) ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGCGGCa < 2:1962427‑M1/9‑1 (MQ=255) aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGt > 1:3635999‑M1/65‑76 (MQ=255) aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGt < 2:5611966‑M1/12‑1 (MQ=255) accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt < 2:3179860‑M1/13‑1 (MQ=255) accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt < 2:2342057‑M1/13‑1 (MQ=255) cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGgtttc < 2:4413406‑M1/15‑2 (MQ=255) gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGGTTAc < 2:2183842‑M1/16‑1 (MQ=255) taatatcgccgcccatatttttctccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc > 2:3807065‑M1/60‑76 (MQ=255) taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc < 1:337753‑M1/17‑1 (MQ=255) aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGGCGGTTTaccc < 2:308459‑M1/18‑2 (MQ=255) atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa > 1:3179860‑M1/56‑76 (MQ=255) atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa > 1:875480‑M1/56‑76 (MQ=255) tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGGTTCCCGCcac < 2:1000894‑M1/22‑2 (MQ=255) tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGGTTACCGCCAt < 1:2116333‑M1/22‑1 (MQ=255) tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGCGCAAGGCTTACCGCCAt < 2:2301047‑M1/22‑1 (MQ=255) cccccccccattttttccgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt > 1:445780‑M1/55‑76 (MQ=255) cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg < 1:2600291‑M1/23‑1 (MQ=255) cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt < 2:654340‑M1/26‑1 (MQ=255) gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTg < 1:3261830‑M1/27‑1 (MQ=255) cccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCCACCTGACTGt < 2:4070770‑M1/28‑1 (MQ=255) catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt < 2:2566654‑M1/30‑1 (MQ=255) tatttttcgccagacgacgagaaacggccagaccaataccgctgCCGGTGGCAGGTTTACCGCCATGACTGTCttt < 2:285936‑M1/32‑1 (MQ=255) ttttcgccagacgacgagaaacggccagaccactaccggcgCCGGTGGCCGGTTTACCGCCATGACTGTCTTTCAc < 2:3905957‑M1/35‑1 (MQ=255) ttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt < 1:3233469‑M1/37‑1 (MQ=255) gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt < 1:900037‑M1/40‑1 (MQ=255) ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa < 1:5448213‑M1/41‑1 (MQ=255) cagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa < 2:5467253‑M1/42‑1 (MQ=255) agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt < 1:3854454‑M1/14‑1 (MQ=255) agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt > 2:3854453‑M1/34‑47 (MQ=255) agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt < 2:2952713‑M1/43‑1 (MQ=255) gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt < 1:2907664‑M1/47‑1 (MQ=255) gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt < 1:1025104‑M1/47‑1 (MQ=255) aacaagaaccggccagacaaatcccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt > 1:5528002‑M1/30‑76 (MQ=255) ggagaaacgggccagaccaatacgggggCGGGGGGCGGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg > 2:1515257‑M1/29‑76 (MQ=255) acgagaaccggccagcccaagcccggtgCGGGGGGCGGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg > 1:1770077‑M1/29‑76 (MQ=255) acgagaaccggccagaccaatcccggtgCGGGTGGCGGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg > 1:5790068‑M1/29‑76 (MQ=255) acgagaaacggccagaccaataccggtgCCGGTCGCAGGTGTACCGCCGTGACTGTCTTTCACCTGGTAATACATg < 1:81392‑M1/48‑1 (MQ=255) ctagaaccggccagcccaatcccggtgCGGGGGGCAGGTTTCCCGCCATGACTGTCTTTCACCTGGTAATACATgg > 1:118483‑M1/28‑76 (MQ=255) gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc < 2:3087423‑M1/50‑1 (MQ=255) gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc < 1:4531104‑M1/50‑1 (MQ=255) agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCg < 2:4627643‑M1/51‑1 (MQ=255) aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaa < 1:3337412‑M1/53‑1 (MQ=255) aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaa < 2:5127696‑M1/53‑1 (MQ=255) agcgcccagacaaatcccggtgCGGGTGGCAGGTTTCCCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaa > 1:5819883‑M1/23‑76 (MQ=255) aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAACTGGCaaaa < 2:4854714‑M1/54‑1 (MQ=255) ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt < 1:3837664‑M1/57‑1 (MQ=255) ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt < 1:4949198‑M1/57‑1 (MQ=255) cgccagaccaataccggtgCCGGTGGCAGGCTTACCGCCATGCCTGTCTTTCACCTGGTAATACATGGCGAAAAtt < 2:4714687‑M1/57‑1 (MQ=255) ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGCAATACATGGCGAAAAtttt < 1:1293436‑M1/59‑1 (MQ=255) agaccactcccggggCCGGGGGCATTTTTCCCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:1625136‑M1/16‑76 (MQ=255) agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCCCCTGGTAATACACGGCGAAAATTTtac < 2:2141509‑M1/61‑2 (MQ=255) agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt < 2:2148861‑M1/61‑1 (MQ=255) agaccaaccccggtgCGGGGGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:1323605‑M1/16‑76 (MQ=255) accccactcccggtgCGGGGGGCAGTTTCACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:1572033‑M1/16‑76 (MQ=255) accccaatcccggtgCGGGGGGCGGTTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:2516199‑M1/16‑76 (MQ=255) gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc < 2:1435476‑M1/62‑1 (MQ=255) ccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa < 1:817599‑M1/64‑1 (MQ=255) caataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg < 1:2840157‑M1/65‑1 (MQ=255) tataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc < 1:4915999‑M1/66‑1 (MQ=255) gtcaccggtgCGGGGGGGGGGTTGACCGCCATGGCTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc > 2:612338‑M1/11‑76 (MQ=255) aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc < 2:183843‑M1/66‑1 (MQ=255) aataccggggCCGGTGGCAGGTTTACCGACATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc < 1:5130536‑M1/66‑1 (MQ=255) ataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt < 2:4745678‑M1/67‑1 (MQ=255) ccgggtgCGGGTGGCGGTTTTCCCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCa > 1:2905698‑M1/8‑76 (MQ=255) cgggtgCGGGGGGCGGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAt > 2:4592047‑M1/7‑76 (MQ=255) cggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc < 2:1094008‑M1/71‑1 (MQ=255) ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg > 1:3076539/1‑76 (MQ=255) ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg > 2:3980853/1‑76 (MQ=255) | TTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCG > NC_000913/3349183‑3349333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |