| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,754,317 | +GCG | coding (1138/1149 nt) | yiaY ← | putative oxidoreductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3754317 | 3 (0.020) | 129 (0.850) +GCG |
81/144 | 0.4 | 97.8% | coding (1138/1149 nt) | yiaY | putative oxidoreductase |
| ? | NC_000913 | 3754318 = | 3 (0.020) | coding (1137/1149 nt) | yiaY | putative oxidoreductase | |||||
Only 100 of 144 total aligned reads displayed.
GCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACCTCGCTGC‑‑‑ATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGT > NC_000913/3754242‑3754392 | gCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGc < 1:2734919/76‑1 (MQ=255)gCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGc > 1:2319395/1‑76 (MQ=255) cAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCg > 1:2777726‑M1/1‑75 (MQ=255) aaGGGTTACAGAGCTAGTTGCAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgc < 1:2984666‑M1/76‑3 (MQ=255) aaGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCTGTTGTGGAAATGATGATTACATCGCTGCgc < 1:4475106‑M1/76‑3 (MQ=255) aaGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgc > 2:5201428‑M1/1‑74 (MQ=255) aGGGTTACAGGGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcg < 1:4278198‑M1/76‑4 (MQ=255) aGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcg > 1:387134‑M1/1‑73 (MQ=255) gggTTGCAGAGATAGTTGAAAAAGCGGCTAGCAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCtcga < 2:687698‑M1/76‑5 (MQ=255) gggTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcga > 2:2489785‑M1/1‑72 (MQ=255) gggTTACAGAGATAGGTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcga > 2:3862883‑M1/1‑72 (MQ=255) ggTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCGGCCGTTGTGGAAATGATGATTACATCGCTGCgcgat < 2:2468299‑M1/76‑6 (MQ=255) ggTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgat > 1:180323‑M1/1‑71 (MQ=255) tACAGAGATAGTTGAAAAAGAGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaa < 2:4044724‑M1/76‑9 (MQ=255) gcaGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaat > 2:2640004‑M1/2‑67 (MQ=255) aCAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaac > 2:2481323‑M1/1‑67 (MQ=255) cAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatc > 2:1068076‑M1/1‑66 (MQ=255) gagaTAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgc < 1:4954303‑M1/76‑13 (MQ=255) gagaTAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgc < 1:60149‑M1/76‑13 (MQ=255) gaTAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgcca > 2:3297603‑M1/1‑62 (MQ=255) tAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccaca > 2:4331605‑M1/1‑60 (MQ=255) tAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccaca < 2:2391507‑M1/76‑17 (MQ=255) gTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaat > 2:4514239‑M1/1‑58 (MQ=255) ttGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatt > 2:5261778‑M1/1‑57 (MQ=255) aaaaaGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttct > 1:3841905‑M1/1‑54 (MQ=255) aaaaaGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttct < 2:1894696‑M1/76‑23 (MQ=255) aaatGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttctt < 1:1377026‑M1/76‑24 (MQ=255) aGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgt > 1:182019‑M1/1‑50 (MQ=255) aGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgt > 2:5435669‑M1/1‑50 (MQ=255) gCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtg < 1:5261779‑M1/76‑28 (MQ=255) cGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtga > 2:3846156‑M1/1‑48 (MQ=255) gCTAACACTTTGCCAGCCGCTGAGGAAATGATGATTACATCCCTGCGCGATAACACGCCACAATCTCTTCGCGAGt > 2:5045408/1‑76 (MQ=255) gCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagt > 1:4124125‑M1/1‑46 (MQ=255) ttaataatTGGCCAGCTGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagtt < 1:1441150‑M1/75‑32 (MQ=255) cTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagtt < 2:2319395‑M1/76‑32 (MQ=255) cTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagtt > 2:3981118‑M1/1‑45 (MQ=255) cTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttagtgagtt > 2:1167178‑M1/1‑45 (MQ=255) tAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttg < 1:5674117‑M1/76‑33 (MQ=255) tAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttg > 2:2919157‑M1/1‑44 (MQ=255) tAACAATTTGCCAGCCGTTGCGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttg > 1:3410038‑M1/1‑44 (MQ=255) aaCAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgc > 2:4702347‑M1/1‑43 (MQ=255) aaCAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgc > 1:1027566‑M1/1‑43 (MQ=255) aaCAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgc < 2:501846‑M1/76‑34 (MQ=255) aaCAATTGGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgc < 2:3430509‑M1/76‑34 (MQ=255) aCAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcc < 1:360672‑M1/76‑35 (MQ=255) cAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcct < 1:1634522‑M1/76‑36 (MQ=255) cAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcct > 2:4389107‑M1/1‑41 (MQ=255) cAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcct > 2:4538238‑M1/1‑41 (MQ=255) aaTTTGCGAGCCGTTGTGGAAATGATGATTCCATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctg < 2:300795‑M1/76‑37 (MQ=255) aaTTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctg > 1:1028341‑M1/1‑40 (MQ=255) aTTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcctgagttgcctgg > 2:21029‑M1/1‑39 (MQ=255) tttGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctgga > 1:3288634‑M1/1‑38 (MQ=255) ttGCCGGCCGTTGTGGAAATGATGTTTACATCGCTGCgcgataaatcgccacaatttcttcgtgatttgcctggat < 2:3127107‑M1/76‑40 (MQ=255) ttGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggat > 2:423216‑M1/1‑37 (MQ=255) tGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatc < 2:3575252‑M1/76‑41 (MQ=255) tGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatc < 1:1547176‑M1/76‑41 (MQ=255) gCCAGCGGTTGTGAGACTGATGATTCCATGGCTGCGCGATAAATCGCCACAATTTCTTCGTGAGTTGGCTGGATCg < 2:2265809/76‑1 (MQ=255) gCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcg > 2:4167349‑M1/1‑35 (MQ=255) gCCAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcg > 1:4467334‑M1/1‑35 (MQ=255) ccAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgg < 1:2182110‑M1/76‑43 (MQ=255) cAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcggg > 1:2072872‑M1/1‑33 (MQ=255) cAGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcggg > 1:3770560‑M1/1‑33 (MQ=255) aGCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggt < 1:3663461‑M1/76‑45 (MQ=255) gCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggtt < 2:5732661‑M1/76‑46 (MQ=255) gCCGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggtt < 2:2716830‑M1/76‑46 (MQ=255) cGTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttag > 1:4054276‑M1/1‑29 (MQ=255) gTTGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagt < 2:4556994‑M1/76‑49 (MQ=255) ttGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagta < 1:2289397‑M1/76‑50 (MQ=255) ttGTGGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagta > 1:1100374‑M1/1‑27 (MQ=255) gtgGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaa > 2:5020550‑M1/1‑25 (MQ=255) ggggaaATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaa < 2:946276‑M1/74‑52 (MQ=255) tgGAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaag > 1:5836505‑M1/1‑24 (MQ=255) ggAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagc > 2:3973417‑M1/1‑23 (MQ=255) gAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagcc > 2:5788310‑M1/1‑22 (MQ=255) gAAATGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagcc > 1:4719138‑M1/1‑22 (MQ=255) aaTGATGATTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccac < 1:4826691‑M1/76‑57 (MQ=255) atgatgATTACATCGCTGCgcgataaatcgccacaatttcttcgt > 1:5632599‑M1/1‑19 (MQ=255) tgatgaTTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacag < 1:3529227‑M1/76‑59 (MQ=255) gatTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcat > 2:1369390‑M1/1‑14 (MQ=255) gatTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcat < 2:149556‑M1/76‑63 (MQ=255) gatTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcat > 2:5629008‑M1/1‑14 (MQ=255) atTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatc < 1:4007968‑M1/76‑64 (MQ=255) atTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatc > 2:5238335‑M1/1‑13 (MQ=255) atTACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatc < 1:4140744‑M1/76‑64 (MQ=255) atTACATCGCTGCgcgataaatcgccacaatttcctcgtgaggtgcctggatcgggttagtaaagccacaggcatc > 2:2014749‑M1/1‑13 (MQ=255) tACATCGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctt < 1:3386232‑M1/76‑66 (MQ=255) acatcgcTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatcttt > 1:3271071‑M1/4‑10 (MQ=255) catcgCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttc > 1:3068119‑M1/3‑9 (MQ=255) catcgCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttc < 2:2263279‑M1/74‑68 (MQ=255) catcgCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttc > 1:3072098‑M1/3‑9 (MQ=255) atcGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttca > 1:1801141‑M1/2‑8 (MQ=255) atcGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgg < 1:5150402‑M1/49‑43 (MQ=255) atcGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgg > 2:5150401‑M1/2‑8 (MQ=255) cGCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcagg < 2:207597‑M1/76‑71 (MQ=255) gCTGCgcgataaatcgccagaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcaggg < 1:4280493‑M1/76‑72 (MQ=255) gCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcaggg > 2:3182739‑M1/1‑5 (MQ=255) gCTGCgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcaggg > 1:798010‑M1/1‑5 (MQ=255) gcgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcagggcat > 1:2635296‑M1/1‑2 (MQ=255) gcgcgataaatcgccacaatttcttcgtgagttgcctggatcgggttagtaaagccacaggcatctttcagggcat > 2:463841‑M1/1‑2 (MQ=255) c‑‑‑ATAATTCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAACGACACAGTCATCTTTCAGCGCACTAgc > 1:2785827/1‑75 (MQ=255) | GCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACCTCGCTGC‑‑‑ATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGT > NC_000913/3754242‑3754392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |