| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,754,317 | +GCG | coding (1138/1149 nt) | yiaY ← | putative oxidoreductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3754317 | 3 (0.020) | 129 (0.850) +GCG |
81/144 | 0.4 | 97.8% | coding (1138/1149 nt) | yiaY | putative oxidoreductase |
| ? | NC_000913 | 3754318 = | 3 (0.020) | coding (1137/1149 nt) | yiaY | putative oxidoreductase | |||||
Only 100 of 142 total aligned reads displayed.
GGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACCTCGCTGC‑‑‑ATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGTC > NC_000913/3754246‑3754393 | gggttgcagagatagttgaaaaagcggctagcaatttgccagccgttgtggaaatgatgattacatcgctgctcga < 2:687698‑M2/1‑1 (MQ=255)gggttacagagatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcga > 2:2489785‑M2/76‑76 (MQ=255)gggttacagagataggtgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcga > 2:3862883‑M2/76‑76 (MQ=255) ggttacagagatagttgaaaaagcggctaacaatttgccggccgttgtggaaatgatgattacatcgctgcgcgAt < 2:2468299‑M2/2‑1 (MQ=255) ggttacagagatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgAt > 1:180323‑M2/75‑76 (MQ=255) ttacagagatagtggaaaaagcggctaacaatttgccagccgttgtggaaaggatgattacatcgctgcgcgATaa < 2:2040934‑M2/4‑1 (MQ=255) tacagagatagttgaaaaagaggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATaaa < 2:4044724‑M2/5‑1 (MQ=255) gcagagatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAAt > 2:2640004‑M2/71‑76 (MQ=255) aagagatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATc < 2:5041877‑M2/7‑1 (MQ=255) gagatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGc < 1:4954303‑M2/9‑1 (MQ=255) gatagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCca > 2:3297603‑M2/66‑76 (MQ=255) atagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAGATCGCcac > 1:793636‑M2/65‑76 (MQ=255) atagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCcac < 1:2735607‑M2/12‑1 (MQ=255) tagttgaaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCcaca > 2:4331605‑M2/64‑76 (MQ=255) aaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATttct < 1:1787796‑M2/19‑1 (MQ=255) aaaaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATttct > 1:3841905‑M2/58‑76 (MQ=255) aaatgcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATttctt < 1:1377026‑M2/20‑1 (MQ=255) aaagcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATttcttc > 1:5357004‑M2/56‑76 (MQ=255) aaagcggctaacaatttgccagccgttgtggaaatgatgattacatccctgcgcgACAAATCGCCACACTttcttc > 2:5267044‑M2/56‑76 (MQ=255) agcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGt > 1:182019‑M2/54‑76 (MQ=255) agcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGt > 2:5435669‑M2/54‑76 (MQ=255) gcggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTg < 1:5261779‑M2/24‑1 (MQ=255) cggctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGa > 2:3846156‑M2/52‑76 (MQ=255) gctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGt > 1:4124125‑M2/50‑76 (MQ=255) gCTAACACTTTGCCAGCCGCTGAGGAAATGATGATTACATCCCTGCGCGATAACACGCCACAATCTCTTCGCGAGt > 2:5045408/1‑76 (MQ=255) ttaataattggccagctgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGtt < 1:1441150‑M2/28‑1 (MQ=255) ctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGtt > 2:3981118‑M2/49‑76 (MQ=255) ctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGtt < 2:2319395‑M2/28‑1 (MQ=255) ctaacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTAGTGAGtt > 2:1167178‑M2/49‑76 (MQ=255) taacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTg > 1:2471867‑M2/48‑76 (MQ=255) taacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTg < 1:5674117‑M2/29‑1 (MQ=255) taacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCATCACAATTTATTCGTGAGTTg > 1:3352925‑M2/48‑76 (MQ=255) taacaatttgccagccgttgcggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTg > 1:3410038‑M2/48‑76 (MQ=255) aacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc < 2:501846‑M2/30‑1 (MQ=255) aacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc > 2:2471451‑M2/47‑76 (MQ=255) aacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc > 2:4702347‑M2/47‑76 (MQ=255) aacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc > 1:1027566‑M2/47‑76 (MQ=255) aacaatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc < 2:3161335‑M2/30‑1 (MQ=255) aacaattggccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGc < 2:3430509‑M2/30‑1 (MQ=255) caatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCt < 1:1634522‑M2/32‑1 (MQ=255) caatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCt > 2:4538238‑M2/45‑76 (MQ=255) caatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCt > 2:4389107‑M2/45‑76 (MQ=255) aatttgcgagccgttgtggaaatgatgattccatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTg < 2:300795‑M2/33‑1 (MQ=255) aatttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTg > 1:1028341‑M2/44‑76 (MQ=255) atttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCCTGAGTTGCCTgg > 2:21029‑M2/43‑76 (MQ=255) tttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGa > 1:3288634‑M2/42‑76 (MQ=255) ttgccggccgttgtggaaatgatgtttacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGATTTGCCTGGAt < 2:3127107‑M2/36‑1 (MQ=255) ttgccagccgttgtgggaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGGTGCCTGGAt > 1:3229996‑M2/41‑76 (MQ=255) ttgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGAt > 2:423216‑M2/41‑76 (MQ=255) tgccagccgttgtggaaatgatgattacatcgctgcgctATAAATCGCCCCAATTTCTTCGTGAGTTGcctggctc < 1:3493101‑M2/37‑4 (MQ=255) tgccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATc < 1:1547176‑M2/37‑1 (MQ=255) gccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCg > 1:4467334‑M2/39‑76 (MQ=255) gccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCg > 2:4167349‑M2/39‑76 (MQ=255) gccagcaggtgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCg > 1:4308636‑M2/39‑76 (MQ=255) ccagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCgg < 1:2182110‑M2/39‑1 (MQ=255) cagccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCggg > 1:2072872‑M2/37‑76 (MQ=255) agccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGt < 1:3663461‑M2/41‑1 (MQ=255) gccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGtt < 2:5732661‑M2/42‑1 (MQ=255) ccgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTa < 2:2909241‑M2/43‑1 (MQ=255) cgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAg > 1:4054276‑M2/33‑76 (MQ=255) cgttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAg > 2:1113508‑M2/33‑76 (MQ=255) gttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGt < 2:4556994‑M2/45‑1 (MQ=255) ttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTa < 1:3862884‑M2/46‑1 (MQ=255) ttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTa < 1:2289397‑M2/46‑1 (MQ=255) ttgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTa > 1:1100374‑M2/31‑76 (MQ=255) tgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTaa < 1:4040257‑M2/47‑1 (MQ=255) tgtggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTaa > 2:2321625‑M2/30‑76 (MQ=255) ggggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTaaa < 2:946276‑M2/48‑1 (MQ=255) tggaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAg > 1:5836505‑M2/28‑76 (MQ=255) gaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGcc > 2:5788310‑M2/26‑76 (MQ=255) gaaatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGcc > 1:4719138‑M2/26‑76 (MQ=255) aatgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCcac < 1:4826691‑M2/53‑1 (MQ=255) atgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCcaca < 1:5714162‑M2/54‑1 (MQ=255) tgatgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAg < 1:3529227‑M2/55‑1 (MQ=255) atgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGc < 2:3835667‑M2/57‑1 (MQ=255) tgattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCa > 2:263087‑M2/19‑76 (MQ=255) gattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCAt < 2:149556‑M2/59‑1 (MQ=255) gattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCAt > 2:1369390‑M2/18‑76 (MQ=255) gattacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCAt > 2:5629008‑M2/18‑76 (MQ=255) attacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATc > 2:5238335‑M2/17‑76 (MQ=255) attacatcgctgcgcgATAAATCGCCACAATTTCCTCGTGAGGTGCCTGGATCGGGTTAGTAAAGCCACAGGCATc > 2:2014749‑M2/17‑76 (MQ=255) ttacatcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCt < 1:3037783‑M2/61‑1 (MQ=255) catcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTc < 2:2263279‑M2/64‑1 (MQ=255) catcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTc > 1:3072098‑M2/13‑76 (MQ=255) atcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCgg < 1:5150402‑M2/39‑1 (MQ=255) tcgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAg < 2:182019‑M2/66‑1 (MQ=255) cgctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAgg > 2:2165750‑M2/10‑76 (MQ=255) gctgcgcgATAAATCGCCAGAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAggg < 1:4280493‑M2/68‑1 (MQ=255) gctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAggg > 1:798010‑M2/9‑76 (MQ=255) gctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAggg > 2:4509867‑M2/9‑76 (MQ=255) gctgcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAggg < 2:5192411‑M2/68‑1 (MQ=255) gcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCAt < 1:3736159‑M2/71‑1 (MQ=255) gcgcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCAt > 2:463841‑M2/6‑76 (MQ=255) c‑‑‑ATAATTCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAACGACACAGTCATCTTTCAGCGCACTAgc > 1:2785827/1‑75 (MQ=255) gcgATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTa < 2:2777726‑M2/73‑1 (MQ=255) gATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGt > 2:3283768‑M2/2‑76 (MQ=255) gATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGt > 1:2921275‑M2/2‑76 (MQ=255) aTAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAATCCACAGTCATCTTTCAGGGCATTAGTc < 1:2673996/76‑1 (MQ=255) aTAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGTc < 2:3405732/76‑1 (MQ=255) aTAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGTc < 1:2511696/76‑1 (MQ=255) | GGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACCTCGCTGC‑‑‑ATAAATCGCCACAATTTCTTCGTGAGTTGCCTGGATCGGGTTAGTAAAGCCACAGGCATCTTTCAGGGCATTAGTC > NC_000913/3754246‑3754393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |