| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 261899 = | 444 (2.790) | 4 (0.030) | 4/126 | 13.8 | 1.1% | coding (1173/1254 nt) | proA | gamma‑glutamylphosphate reductase |
| ? | NC_000913 | 261911 = | 365 (2.740) | coding (1185/1254 nt) | proA | gamma‑glutamylphosphate reductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 444 total aligned reads displayed.
TAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCG > NC_000913/261824‑261973 | aCGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCa < 1:2117232/76‑1 (MQ=255) cGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGGAGGG‑CACAAAAACAcccc > 1:4748161/1‑74 (MQ=255) gCCTCTGCGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcg < 2:4405149/76‑1 (MQ=255) gCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcg < 1:4857786/76‑1 (MQ=255) gCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGAGGCACCACAAAAACAcccc > 2:1562160/1‑74 (MQ=255) ccTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgc < 1:3839338/76‑1 (MQ=255) ccTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgc < 1:2969250/76‑1 (MQ=255) ccTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgc < 2:4892909/76‑1 (MQ=255) ccTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGGAGCA‑AACAAAAAcaccaccc > 2:2877232/1‑74 (MQ=255) ccTCTACGCGTTTTACCGACGGCGGCCAGTTTGGCCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgc < 1:180404/76‑1 (MQ=255) tctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgcgc < 1:3720055/76‑1 (MQ=255) tctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCAcgcgc < 1:4306776/76‑1 (MQ=255) tACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGt < 1:1396561/76‑1 (MQ=255) tcgcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTg < 2:2482346/75‑1 (MQ=255) ccgcgTTTTCCCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTg < 1:998838/75‑1 (MQ=255) aCGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTg < 1:1109159/76‑1 (MQ=255) cgcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTgg < 1:3069845/76‑1 (MQ=255) cgcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTgg < 1:4349430/76‑1 (MQ=255) gcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGc < 1:3333689/76‑1 (MQ=255) gcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGGAGGA‑CACCAAAACACCCCGCCCGCggg > 1:1011282/1‑75 (MQ=255) cgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGGGGGA‑CACAAAAACACCACCCGCGCgggc > 1:290992/1‑74 (MQ=255) cgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGAAGCA‑CACAAAAACACCACGCGCgggggc > 1:5734563/1‑74 (MQ=255) gtgttACCGACAGCGGCCAGTGTGGTCTGGGTGCGGAAGTGGCGGTAACCC‑CACAAAAACTCCACGCGCGTGGccc < 1:5177566/73‑1 (MQ=255) ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCa < 1:623910/76‑1 (MQ=255) ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGGAGGA‑CACAAAAACCCCCCCCGCGCGGcccc > 2:4239840/1‑75 (MQ=255) ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGGAAGCA‑CACAAAAACACCCCCCCCGCGGcccc > 1:3281376/1‑75 (MQ=255) tttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCaa < 1:4160974/76‑1 (MQ=255) ttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAAt < 1:756593/76‑1 (MQ=255) ttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAAt < 2:4725811/76‑1 (MQ=255) aCCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATgg < 1:1475098/76‑1 (MQ=255) cGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATgggg < 1:5327161/76‑1 (MQ=255) gACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGc < 2:3343953/76‑1 (MQ=255) aCGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCt < 2:1936199/76‑1 (MQ=255) aCGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCt < 2:4607511/76‑1 (MQ=255) aCGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCt < 1:4429946/76‑1 (MQ=255) ggcgggcgGTGTGGTCGGGTGGCGGAAGTGGCGGTAAGCA‑CGCAAAACCTCCACGCGCGTGGCCCAATGGGGCTgg < 2:3214071/76‑1 (MQ=255) ggcggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTgg < 1:5444460/76‑1 (MQ=255) gcggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGa < 1:4965348/76‑1 (MQ=255) gggcCAGTTTGGTGTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGaa < 2:1506701/75‑1 (MQ=255) cggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGaa < 2:2281524/76‑1 (MQ=255) cggcCAGTTTGGGCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTGCACGCGCGTGGCCCAATGGGGCTGGaa < 2:584521/76‑1 (MQ=255) ggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAg < 2:1369427/76‑1 (MQ=255) ggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAg < 1:4520193/76‑1 (MQ=255) ggcCAGTGTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CGCAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAg < 2:2972636/76‑1 (MQ=255) gcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CTCAAAACCGCCACGCGCTCGGCCCAATGGGGCTGGAAGc < 1:318432/76‑1 (MQ=255) gcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGc < 1:4012166/76‑1 (MQ=255) ggTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCa < 1:267883/76‑1 (MQ=255) gTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCAc < 2:3488595/76‑1 (MQ=255) gTCTGGGTGCGGAAGTGGCGGGAAGCA‑CACAAAAAAACCCCCCGCCCGGGCCCCCGGGGCGGGGAGCACCGAcccc > 2:2026337/1‑74 (MQ=255) tCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGCCCACt < 1:3681247/76‑1 (MQ=255) tCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACt < 2:2608956/76‑1 (MQ=255) gTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACaa < 1:4910194/76‑1 (MQ=255) tGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAg < 2:3898773/76‑1 (MQ=255) tGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAg < 2:1326024/76‑1 (MQ=255) gCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCAAATGGGGCTGGAAGCACTGACCACTTACAAGt < 2:2659218/76‑1 (MQ=255) gCGGAAGTGGCGGGAAGCA‑CACAAAAAAACCACCCGCGCGGGCCAAAGGGGGTGGGAGGAACGAACACCTACaaaa > 1:2149010/1‑74 (MQ=255) cGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTg < 1:5270301/76‑1 (MQ=255) gggaGTAGCGATAAGCA‑CGCAACAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTgg < 1:5793216/73‑1 (MQ=255) ggAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTgg < 2:3795023/76‑1 (MQ=255) ggAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTgg < 1:1592765/76‑1 (MQ=255) ggAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTgg < 1:5563148/76‑1 (MQ=255) gAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGa < 2:3937910/76‑1 (MQ=255) gAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGa < 2:3549381/76‑1 (MQ=255) aaGTGGCGGTAAGCA‑CACAAAAACTCCCCCCGCGTGGCCCCATGGGGCTGGGAGCCCCGGCCACATTCAAGTGGag > 2:1148214/1‑75 (MQ=255) gTGGCGGTAGTGA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCg < 1:2195582/76‑1 (MQ=255) gTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCg < 2:1610799/76‑1 (MQ=255) gTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCg < 1:3591530/76‑1 (MQ=255) gTGGCGGTAAGCA‑CACAAAAACACCCCGCGCGCGGCCCCATGGGGGCGGAAGCACCCACCCCTCACAAACGGATCg > 2:703908/1‑76 (MQ=255) tGGCGGGAAGCA‑CACAAAAACTCCACGCGCGTGGCGCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCgg < 1:2720541/76‑1 (MQ=255) ggCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGc < 2:4015476/76‑1 (MQ=255) ggCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGc < 1:2435892/76‑1 (MQ=255) cGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAt < 1:34194/76‑1 (MQ=255) gggaaGCA‑CACAAAAACGCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAtt < 2:5639512/73‑1 (MQ=255) ggTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAtt > 1:2793568/1‑76 (MQ=255) gTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGa > 2:867849/1‑67 (MQ=255) tAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTgg < 1:1888278/76‑1 (MQ=255) aaGCA‑CACAAAAACTCCACGGGCGGGGCCCAAGGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGt < 2:17330/76‑1 (MQ=255) aaGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGt < 1:4999871/76‑1 (MQ=255) aaGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGt < 2:5443962/76‑1 (MQ=255) aGCA‑CACAAAAGCTCCACGCGCGTGGCCCAATGGGGCTTGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTg < 1:3884338/76‑1 (MQ=255) aGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTg < 1:407454/62‑1 (MQ=255) aGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTg > 2:407454/1‑62 (MQ=255) aGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGCGGATCGGCATCgggg > 2:3040634/1‑74 (MQ=255) aGCA‑CACAAAAACGCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTg < 2:4491164/76‑1 (MQ=255) gCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGa > 2:5096341/1‑76 (MQ=255) ca‑cacaAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAt > 1:2368736/1‑76 (MQ=255) cccacaAAGACTCCACGCGGGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAt < 2:1814358/74‑1 (MQ=255) cacaAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTa < 1:2297091/76‑1 (MQ=255) acaAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTac > 1:847768/1‑76 (MQ=255) caAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGGGATTaca > 2:5729402/1‑76 (MQ=255) aaaaaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTacac > 2:3117105/1‑76 (MQ=255) aaaaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACAcc > 1:5114266/1‑76 (MQ=255) aaaaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACAcc < 1:2026337/76‑1 (MQ=255) aaaaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAGTGGTGATTACAcc > 1:253518/1‑76 (MQ=255) aaaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCa > 2:5216180/1‑76 (MQ=255) aaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCGTTGGTGATTACACCAt < 1:363275/76‑1 (MQ=255) aaCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCAt > 1:1264099/1‑76 (MQ=255) aCTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCAtt < 2:2732999/76‑1 (MQ=255) cTCCGCGCGCGGGGCCCAATGGGGCTGGGAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTc < 2:3391725/76‑1 (MQ=255) cTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTc < 2:4169342/76‑1 (MQ=255) | TAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCA‑CACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCG > NC_000913/261824‑261973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |