| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3349258 = | 16 (0.120) | 89 (0.650) | 55/150 | 1.3 | 84.8% | coding (1403/2331 nt) | arcB | aerobic respiration sensor‑response protein |
| ? | NC_000913 | = 3349263 | NA (NA) | coding (1398/2331 nt) | arcB | aerobic respiration sensor‑response protein | |||||
GCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3349332‑3349258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < NC_000913/3349263‑3349189 GCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGC < 1:3738467/76‑1GCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGC < 1:2298262/76‑1 CAGGATGCGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCCCCGGCA < 2:3354702/76‑1 AGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCAC < 2:541835/76‑1 AGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCAC < 2:486964/76‑1 AGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAACCTGCCACCCGCAC > 2:3931452/1‑76 AGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGGGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCAC < 2:435010/76‑1 GGATGGGCTTGATAAAATTGTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACC < 2:4761386/76‑1 GGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCACCGGCCCC > 1:634637/1‑76 GATGGGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCGCCGGCACCG < 2:4800844/76‑1 GATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAACCCGCCACCCGCACCG > 2:756167/1‑76 TGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGT < 1:740411/76‑1 TGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGT < 1:71853/76‑1 TGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGT < 2:3932617/76‑1 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTGAAACTGCCCCCGGCCCCGGgg > 1:1486261/1‑74 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCCGCACCGGgg > 1:2330370/1‑74 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGGAAACTGCCCCCCGCACCGGgg > 1:2475701/1‑74 GAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAAACTGCCACCCGCACCCGTg > 1:3656014/1‑75 AGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTAT < 2:1971179/76‑1 GCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATT < 1:4539207/76‑1 GGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGGAAACCTGCCCCCGGCACCCGGGTTGGT > 1:1079517/1‑76 ATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCT < 2:103748/76‑1 AAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG < 2:3868321/76‑1 AAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGG < 2:843581/76‑1 AATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCC < 2:497078/76‑1 TTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGT < 2:4663646/76‑1 TTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGT < 1:4592955/76‑1 TTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTT < 1:3453703/76‑1 TTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCACCCGCACCCGGATTTGTCTGGCCGTTT > 1:3818836/1‑76 TCGCCATGTATTCCCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTC < 1:2725298/76‑1 TCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTC < 2:1303044/76‑1 CGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCCCCCGCACCGGGATTGGTCTGGGCGTTTCT > 1:3731267/1‑76 CGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCT < 2:2320176/76‑1 CGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCCGCCCCCCGCACCCGGATTGGTCTGGGCGGTTCT > 1:3581717/1‑76 CCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCCCCCGCACCCGGATTGGTCTGGCCGTTTCTCG > 1:1495963/1‑76 CATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGT < 1:744878/76‑1 CATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGT < 1:3177932/76‑1 gTGTGTTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTC < 2:686133/75‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTC < 1:3496846/76‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTC < 2:4198920/76‑1 ATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTC < 2:2336438/76‑1 TGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCG < 1:3776919/76‑1 TGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCG < 1:3872049/76‑1 TATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTC < 1:211588/76‑1 TTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTG < 1:4420933/76‑1 ACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCCCCGGCACCGGGATTGGTCTGGCCGGTTTTCGTCGTCTtgg > 1:3256858/1‑73 ACCAGGTGAAAGACAGTCATGGCGGTAAAACTGCCCCCCGCACCGGGATTGGTCTGGGCGTTTTTCGTCGTCTtgg > 1:1662401/1‑73 ACCAGGTGAAAGACAGGCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGC < 2:755071/76‑1 CAGGTGAAAGACAGTCATTGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGA < 2:1487793/76‑1 GTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAA < 2:2579143/76‑1 GTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAA < 2:4400203/76‑1 AAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATA < 1:656778/76‑1 AAGACAGTCATGGCGGTAACCCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATAT < 1:3422373/76‑1 AAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATAT < 1:4196020/76‑1 aACAGGCATGGCGGTAAGCCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGG < 2:160445/75‑1 GACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGG < 1:919954/76‑1 ACAGTCATGGCGGTAAGCCTGCCACCGGCGCCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGG < 2:482415/76‑1 CAGTCATGGCGGTAAACCTGCCACCGTCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTTGCGAAAAATATGGGC < 2:2157817/76‑1 AGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCG < 1:4811331/76‑1 cgTGGCGGTGAGCCTGCCCCCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCG < 2:4461244/74‑1 ATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGA < 2:2534469/76‑1 TGGCGGTAACCCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTGTCGTCGTCTGGCGAAAAATATGGGCGGCGAT < 1:2280449/76‑1 GGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGggt > 1:2330572/1‑73 GCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATAT > 1:540183/1‑76 CGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATT < 2:2403380/76‑1 GGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCCAAAAATATGGGCGGCGATATTc > 2:1853842/1‑75 GTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTAC > 1:3893371/1‑76 TAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTCCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACG < 2:1783121/76‑1 AACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGT > 2:3987460/1‑76 AACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGT > 1:1091015/1‑76 AACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGT > 1:4208124/1‑76 CCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTA < 2:176322/76‑1 CCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTA < 2:1511776/76‑1 CTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTAC > 1:4416728/1‑76 TGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACC < 1:1173175/76‑1 TGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACC < 2:225653/76‑1 GCCAGCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA < 1:3563049/76‑1 GCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA < 2:3853727/76‑1 GCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA < 1:3718588/76‑1 GCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCA < 2:4495778/76‑1 CACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC > 1:4569686/1‑76 CACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC < 1:3987460/76‑1 CACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC < 2:1749007/76‑1 CACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGC > 2:2647145/1‑76 CCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGGAAAATATGGGCGGCGATATTACGGTTACCAGCGA < 1:910097/76‑1 CCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGA < 2:2521688/76‑1 GGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAAC < 1:2762750/76‑1 GCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATGTGGTCGGCGATATTACGGTTACCAGCGAACA < 1:4409566/76‑1 GCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA > 2:3146805/1‑76 GCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3349332‑3349258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACA < NC_000913/3349263‑3349189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |