| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 269765 = | NA (NA) | 121 (0.890) | 76/150 | 0.3 | 25.6% | coding (300/405 nt) | yi91a | hypothetical protein |
| ? | NC_000913 | = 370983 | 351 (2.570) | coding (536/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 581 total aligned reads displayed.
CGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCG > NC_000913/370908‑371058 | cGAGGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat < 2:64788/76‑1 (MQ=255) gATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGatgatg > 2:726252/1‑76 (MQ=255) gATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGatgatg > 2:3987797/1‑76 (MQ=255) aTGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATgg > 1:3895525/1‑76 (MQ=255) tGCAAACCGAAGGTATTGAGCGACTGAATCAGCTTTATCGTCATGCGTCTATCGAAAACCTGAAGCTGATGATGGa < 2:1990317/76‑1 (MQ=255) gCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgta < 2:4267859‑M2/76‑5 (MQ=255) ccAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGata < 1:3719767/76‑1 (MQ=255) gacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGatat < 2:445937‑M2/8‑1 (MQ=255) cAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGatat < 1:2001344/76‑1 (MQ=255) aCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCt < 2:1486306/76‑1 (MQ=255) cGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGACAACCTGAAGCTGATGATGGATATCTTc < 1:2863346/76‑1 (MQ=255) cGAAGGTATGAAGGGACTGAATCAGCTTTGTCGTCAGCCGGCGATCGAAACCCTGAAGCTGATGATGGATATCTTc < 2:2078312/76‑1 (MQ=255) gAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaa < 2:4405706‑M2/76‑12 (MQ=255) gaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGt < 2:130115‑M2/14‑1 (MQ=255) gaagttcaaaacaccgaaagagataattgaaaggggcgttgcattgacagactgaatctacaATGGATATCTTAGt > 2:2184882‑M2/63‑76 (MQ=255) aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGt > 2:3700473/1‑76 (MQ=255) aGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaatt < 1:2242853‑M2/76‑14 (MQ=255) aGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGtt > 2:1065282/1‑76 (MQ=255) ggTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattg > 2:517572‑M2/1‑62 (MQ=255) ggTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGttt < 1:2184347/76‑1 (MQ=255) gttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGtttt > 1:4139560‑M2/60‑76 (MQ=255) gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattgg > 2:4705308‑M2/1‑61 (MQ=255) gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGtttt > 1:783332/1‑76 (MQ=255) ttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttttt > 1:3371825‑M2/59‑76 (MQ=255) tATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggt > 1:4699612‑M2/1‑60 (MQ=255) tATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGttttt < 2:2484180/76‑1 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGa > 2:4763341/1‑76 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGa < 2:2935413/76‑1 (MQ=255) tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaa > 2:1227608‑M2/1‑57 (MQ=255) aaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATa < 2:781833‑M2/22‑1 (MQ=255) acgccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc < 2:3400478‑M2/24‑1 (MQ=255) acaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc < 2:1442663‑M2/24‑1 (MQ=255) cGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCa < 1:2641768/76‑1 (MQ=255) cGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCa < 1:2340742/76‑1 (MQ=255) gACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAg > 2:1653923/1‑76 (MQ=255) aCTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGc > 1:3613221/1‑76 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacag > 2:3895191‑M2/1‑49 (MQ=255) gaaagagataattgaaaggggtgttgcattgacagattgagtctacaATGGATATCTTCGTTTTTGATACCAGCGa > 1:3548391‑M2/48‑76 (MQ=255) gaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGa > 1:243928‑M2/48‑76 (MQ=255) agagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGAttt < 2:191264‑M2/32‑1 (MQ=255) aTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGAttt < 1:2583400/76‑1 (MQ=255) tCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTg < 2:2238412/76‑1 (MQ=255) cAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGa > 1:4071415/1‑76 (MQ=255) cAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGa < 2:2671728/76‑1 (MQ=255) aGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGAc > 1:1774838/1‑76 (MQ=255) gCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGAcc < 1:3311013/76‑1 (MQ=255) ataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGAcc < 2:170416‑M2/36‑1 (MQ=255) taattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCg > 1:849545‑M2/40‑76 (MQ=255) cTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCg < 1:380987/76‑1 (MQ=255) tttATCGTCAGCCTTCTATCGAAACCCTGAAGCTGATGCTtgtagattcaattggtcaacgccacagttatgtgca > 1:4772571‑M2/1‑40 (MQ=255) ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaa > 2:4338236‑M2/1‑39 (MQ=255) ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTCTGATACCAGCGATTTGACCGAc > 1:4843716/1‑76 (MQ=255) gTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCt < 1:1617358/76‑1 (MQ=255) tCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGAGTTGACCGACGCCCTg > 1:1683285/1‑76 (MQ=255) aGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTgct > 1:1243849/1‑74 (MQ=255) ggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGttt > 2:3829742‑M2/29‑76 (MQ=255) gCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGttt < 1:4554182/76‑1 (MQ=255) ccaactaTCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggtt < 1:3191637‑M2/73‑48 (MQ=255) tgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa > 1:1151892‑M2/27‑76 (MQ=255) cGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa > 2:3310325/1‑76 (MQ=255) gtctaTCGAAAACCTGAAGCTGATGATtgtcgattcaattggtcaacgccccagttatgtgaaatcatggggttgc > 1:1049733‑M2/3‑27 (MQ=255) ttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAg > 1:2741850‑M2/25‑76 (MQ=255) cTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcgg > 1:2553147‑M2/1‑25 (MQ=255) cTATCGAAAACCTGAAGCTGATGATtgtagattaaattggtcaacgaaacagttatgtgaaacaattgggttgcgg < 1:4626394‑M2/76‑52 (MQ=255) ttgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc > 2:4560644‑M2/20‑76 (MQ=255) cGAAAACCTGGAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc < 2:275843/76‑1 (MQ=255) cGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc > 1:1451544/1‑76 (MQ=255) gAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtt > 2:2459884‑M2/1‑20 (MQ=255) gacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCt > 2:1003042‑M2/18‑76 (MQ=255) aaaaCCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCt < 1:648803/76‑1 (MQ=255) agattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa > 2:377041‑M2/15‑76 (MQ=255) ccTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat < 2:2577536/76‑1 (MQ=255) ccTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat > 1:575630/1‑76 (MQ=255) cTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaata > 1:4477301/1‑76 (MQ=255) tgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaataat < 1:2483051‑M2/66‑1 (MQ=255) gAAGGTGAGGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaataat < 2:1772329/76‑1 (MQ=255) aaGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAataata > 1:3448402/1‑76 (MQ=255) aaGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAataata < 2:3628353/76‑1 (MQ=255) aaGCTGATGATGGATATCTACGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAataata > 2:2993170/1‑76 (MQ=255) aatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat > 2:3192194‑M2/9‑76 (MQ=255) aGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat > 1:4209411/1‑76 (MQ=255) aGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat > 2:3095823/1‑76 (MQ=255) gCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATg < 1:3981992/76‑1 (MQ=255) tctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGc > 2:4047413‑M2/7‑76 (MQ=255) cTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTg > 2:873245/1‑39 (MQ=255) cTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGc > 1:2067737/1‑76 (MQ=255) tgatgaTGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCt > 1:1294852/1‑76 (MQ=255) gatgatGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTg > 2:1842944/1‑76 (MQ=255) gatgatGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTg > 1:3052552/1‑76 (MQ=255) gatgatGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTg > 2:4667068/1‑76 (MQ=255) gatgatGGATATCTTCGTTTTTGATACAAGCGATTTGACCGACGCCCTGTTTGAACCCCGCATGAATAATATGCTg > 2:2311348/1‑76 (MQ=255) atgatgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGt < 2:1367100/76‑1 (MQ=255) atgatgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGt < 1:1713711/76‑1 (MQ=255) tgatgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTc < 1:4296718/76‑1 (MQ=255) gatgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcg > 1:4380874/1‑76 (MQ=255) attgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaaca < 1:2774195‑M2/76‑75 (MQ=255) atgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgc > 1:2834775/1‑76 (MQ=255) atgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgc < 1:1558092/76‑1 (MQ=255) ttgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacat > 2:920009‑M2/1‑1 (MQ=255) tgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgcg > 2:1587923/1‑76 (MQ=255) | CGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCG > NC_000913/370908‑371058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |