| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 894129 = | 13 (0.570) | 3 (0.150) | 3/88 | NT | 20.5% | intergenic (+274/‑77) | ybjN/potF | predicted oxidoreductase/putrescine transporter subunit |
| ? | W3110S.gb | 894150 = | 12 (0.610) | intergenic (+295/‑56) | ybjN/potF | predicted oxidoreductase/putrescine transporter subunit | |||||
CGTTAACAAACGAACAAAAGTTGTCACACTGAAAGATATGCAATAAACGTGCATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/894184‑894129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatatCTTTCAGTGTGACAACTTTTGTTCGTTTGTTAAC > W3110S.gb/894150‑894183 CGTTAACAAACGAACAAAAGTTGTCACACTGAAAGATATGCAATAAACGTGC > 1:1954239/1‑52 AGATATGCAATAAACGTGCATATTTTTCAGTGTGACAACTT < 1:1899647/41‑1 GATATGCAATAAACGTGCATATCTTTCAGTGTGACAACTTTTGTTCGTTTGTTA < 1:736093/54‑1 ATATGCAATAAACGTGCATATCTTTCAGTGTGACAACTTTTGTTCG < 1:595488/46‑1 CATATCTTTCAGTGTGACAACTTTTGTTCGTTTGTTAA > 1:757387/1‑38 ATATCTTTCAGTGTGACAACTTTTGTTCGTTTGTTAAC < 1:313334/38‑1 CGTTAACAAACGAACAAAAGTTGTCACACTGAAAGATATGCAATAAACGTGCATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/894184‑894129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatatCTTTCAGTGTGACAACTTTTGTTCGTTTGTTAAC > W3110S.gb/894150‑894183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |