| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1286086 | 20 (0.880) | 3 (0.150) | 3/90 | NT | 13.4% | coding (906/1539 nt) | narH | nitrate reductase 1, beta (Fe‑S) subunit |
| ? | W3110S.gb | = 1286104 | 21 (1.040) | coding (924/1539 nt) | narH | nitrate reductase 1, beta (Fe‑S) subunit | |||||
CGCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1286014‑1286086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgatGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGATCTTTCTCGTTCTCGGT < W3110S.gb/1286104‑1286036 CGCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCG < 1:1711878/71‑1 GCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGA > 1:528463/1‑71 CGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCT > 1:890900/1‑59 ACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGA > 1:455661/1‑50 ACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGA > 1:561932/1‑50 GAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGATGACTTTCGGATCGTTCGGATCGAGG < 1:1030353/71‑1 GAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCC > 1:1173600/1‑41 GAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGATGACTTTCGGATCGTTCGGATCGAG < 1:1871551/64‑1 AAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGATGACTTTCGGATCGTTCGGATCGAGGA > 1:318154/1‑64 TCGATGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGATCTTTCTCGTTCTC > 1:403448/1‑71 ATGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGATCTTTCTCGTTCTCGGT < 1:501198/71‑1 ATGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGC < 1:548383/45‑1 TGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGATCTTTCTCGTTCTCGGT > 1:817377/1‑70 TGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGAT < 1:1329926/54‑1 TGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGAT < 1:15551/54‑1 CGCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1286014‑1286086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgatGACTTTCGGATCGTTCGGATCGAGGAACACGTCCAGCTGACGCTGGTAAAGATCTTTCTCGTTCTCGGT < W3110S.gb/1286104‑1286036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |