| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4918 = | 60 (0.740) | 5 (0.070) | 3/84 | NT | 8.7% | coding (1185/1287 nt) | thrC | threonine synthase |
| ? | W3110S.gb | 4939 = | 53 (0.760) | coding (1206/1287 nt) | thrC | threonine synthase | |||||
GCAACGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4994‑4918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcagaACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGAT > W3110S.gb/4939‑5007 GCAACGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTT > 1:2430930/1‑71 CGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGG > 1:4723928/1‑69 CGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGG > 1:4351937/1‑69 CGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTT > 1:3297356/1‑67 CGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTT > 1:2890730/1‑67 CGCAGCAAAATCGGAGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTT > 1:6182998/1‑67 CAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGG > 1:2462939/1‑67 GGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGC > 1:3671027/1‑55 GCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGG > 1:3628720/1‑52 AGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGC < 1:980043/51‑1 AGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGC < 1:2518681/51‑1 TATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGG > 1:2513543/1‑46 TATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTG > 1:2859797/1‑45 GAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTT > 1:3834006/1‑39 AAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGCAG > 1:2803151/1‑42 TCTGCCAGCTCTTTTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCT > 1:3729468/1‑70 TGCCAGCTCTTTTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGC > 1:5292744/1‑54 TGCCAGCTCTTTTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGC > 1:7569382/1‑54 TGCCAGCTCTTTTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGC > 1:1057810/1‑54 CCAGCTCTTTTGGCAGAACGTGCTGATTTACCCTTGCTT < 1:3005743/39‑1 GGCAGAACGTGCTGATTTACCCTTGCTTTCACATA > 1:2663875/1‑35 GGCAGAACGTGCTGATTTACCCTTGCTTTCACATA > 1:2267353/1‑35 GCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGAT > 1:4536748/1‑71 AGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGA < 1:6389397/71‑1 AACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGAT < 1:2460747/70‑1 GCAACGCAGCAAAATCGGCGGGCAGATTATGTGAAAGCAAGGGTAAATCAGCACGTTCTGCCAGCTCTTTTGGCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4994‑4918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcagaACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGAT > W3110S.gb/4939‑5007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |