New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	1591954 =	98 (1.200)	8 (0.110)	4/90	NT	8.3%	intergenic (‑239/+117)	ydeT/yneL	hypothetical protein/predicted transcriptional regulator
	?	W3110S.gb	1591980 =	87 (1.160)					intergenic (‑265/+91)	ydeT/yneL	hypothetical protein/predicted transcriptional regulator

TAGAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/1592026‑1591954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTT  >  W3110S.gb/1591980‑1592046                                                                                                                                              TAGAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCA                                                                       >  1:1408186/1‑71   GAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCATT                                                                     <  1:261270/71‑1   GAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      <  1:6452233/70‑1   GAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      <  1:5681047/70‑1   GAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      <  1:1318251/70‑1   GAGCAATTCGGTGTTAGTTTAAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      <  1:7037914/70‑1                               AAACATTAACCATAGCTAATGATTTATAGCCATATTAACCATT                                                                     >  1:2941484/1‑43                                  CATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      >  1:321669/1‑39                                  CATTAACCATAGCTAATGATTTATAGCCATATTAACCAT                                                                      >  1:4210154/1‑39                                               TAATGATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAA                                     <  1:2673304/59‑1                                               TAATGATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAA                                     <  1:444898/59‑1                                                 ATGATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAA                                         >  1:4440201/1‑53                                                 ATGATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAA                                         >  1:5692518/1‑53                                                   GATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAA                                         >  1:3520998/1‑51                                                   GATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAA                                         >  1:1686556/1‑51                                                   GATTTATAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGAAA                                         >  1:7672733/1‑51                                                         TAGCCATATTAACCATTAGCTATGGTTAATGTTTGCTTGCTGA                                           >  1:1776221/1‑43                                                                     aCATTAACCATAGCTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTT   >  1:7486744/2‑71                                                                     aCATTAACCATAGCTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGT    >  1:636878/2‑70                                                                       ATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTT  <  1:3439950/70‑1                                                                       ATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTT  <  1:7273688/70‑1                                                                        TTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTT  <  1:5379000/69‑1                                                                         TAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTG                           <  1:4671239/43‑1                                                                         TAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTG                           <  1:3024613/43‑1                                                                         TAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTG                           <  1:7108625/43‑1                                                                                                                                              TAGAGCAATTCGGTGTTAGTTTCAGCAAGCAAACATTAACCATAGCTAATGATTTATAGCCATATTAACCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/1592026‑1591954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTT  >  W3110S.gb/1591980‑1592046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.