| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1603148 | 61 (0.750) | 5 (0.080) | 3/80 | NT | 7.6% | intergenic (‑193/‑56) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily |
| ? | W3110S.gb | = 1603163 | 71 (1.070) | intergenic (‑208/‑41) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily | |||||
TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1603073‑1603148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacaaatGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGA < W3110S.gb/1603163‑1603100 TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATG < 1:7614194/69‑1 TCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT > 1:966629/1‑70 TCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT > 1:1885848/1‑70 AGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:4247260/1‑58 TTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGA < 1:3879377/49‑1 TTGTGACCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGA < 1:5700083/49‑1 TTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATGTATTTCTGCTTTTAATTTGT < 1:2557366/66‑1 TTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATGTATTTCTGCTTTTAAT > 1:3504662/1‑62 TCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:1357608/1‑39 TCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:7494720/1‑39 TCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:6135785/1‑39 TCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAA > 1:2392383/1‑39 TCCACCTAAGGTTATGAACAAATGTATTTCTGCTTTTAATTTG < 1:3983461/43‑1 TCCACCTAAGGTTATGAACAAATGTATTTCTGCTTTTAATTTG < 1:1801141/43‑1 TCCACCTAAGGTTATGAACAAATGTATTTCTGCTTTTAATTTG < 1:1177208/43‑1 TGAACAAATGTATTTCTGCTTTTAATTTGTTCATAAC > 1:6410858/1‑37 GAACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAA > 1:2333391/1‑68 AACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGA < 1:7176223/71‑1 AACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGA < 1:7855698/71‑1 ACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGA < 1:4744570/70‑1 ACAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTT < 1:6144083/58‑1 CAAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGAC > 1:4338185/1‑44 AAATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCC < 1:723761/58‑1 ATGTATTTCTGGTTTTAATTTGTTCATAACCTTAG < 1:5291988/35‑1 ATGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAAT < 1:6427246/63‑1 TGAAAATCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1603073‑1603148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacaaatGTATTTCTGCTTTTAATTTGTTCATAACCTTAGGTGGACATTGCACATATTTCCGACGAATAGA < W3110S.gb/1603163‑1603100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |