| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1603148 | 61 (0.750) | 5 (0.080) | 3/80 | NT | 7.6% | intergenic (‑193/‑56) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily |
| ? | W3110S.gb | = 1603163 | 71 (1.070) | intergenic (‑208/‑41) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily | |||||
Only 100 of 111 total aligned reads displayed.
TCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGAT > W3110S.gb/1603079‑1603218 | tCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAT > 1:966629‑M1/1‑70 (MQ=255) aaaaTAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTaa < 1:6643760/71‑1 (MQ=255) aaaaTAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTaa < 1:7852380/71‑1 (MQ=255) gCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAg < 1:5431891/71‑1 (MQ=255) gCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAg < 1:4191222/71‑1 (MQ=255) aTAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGa > 1:7626076/1‑70 (MQ=255) aTAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGa > 1:7616997/1‑70 (MQ=255) aaTTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGc > 1:282833/1‑64 (MQ=255) aaTTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGc > 1:3533033/1‑64 (MQ=255) aaTTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAAt > 1:5270026/1‑70 (MQ=255) tgtgATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAtt < 1:1561027/55‑1 (MQ=255) tgtgATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAAtt < 1:4305152/55‑1 (MQ=255) tgtgATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGa > 1:2083129/1‑64 (MQ=255) tCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgtt < 1:7855698‑M2/71‑8 (MQ=255) tCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgtt < 1:7176223‑M2/71‑8 (MQ=255) tCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgt < 1:4744570‑M2/70‑7 (MQ=255) aTTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACat < 1:6427246‑M2/63‑3 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATgtatttctgcttttaat > 1:3504662‑M1/1‑45 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgttc > 1:2333391‑M2/1‑60 (MQ=255) cgtcgGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAAc > 1:7836655/1‑71 (MQ=255) gtcgGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAAc < 1:804407/70‑1 (MQ=255) gtcgGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACt < 1:3013339/71‑1 (MQ=255) tcgGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTc < 1:2160431/71‑1 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTa < 1:4908559/41‑1 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACattt < 1:723761‑M2/58‑5 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa > 1:3969439/1‑64 (MQ=255) aaaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCt < 1:2765880/71‑1 (MQ=255) aaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTg < 1:3662864/71‑1 (MQ=255) aaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTg > 1:7169319/1‑71 (MQ=255) tatGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGc > 1:7519925/1‑70 (MQ=255) atGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc > 1:6526297/1‑65 (MQ=255) tgtgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaa < 1:5919907/71‑1 (MQ=255) tgtgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaa > 1:7047224/1‑70 (MQ=255) tgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaaa < 1:4426888/70‑1 (MQ=255) tgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaa < 1:1957433/68‑1 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACt > 1:7462225/1‑71 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACt > 1:4920649/1‑71 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACt > 1:6123742/1‑71 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACt > 1:4345186/1‑71 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACt > 1:2465155/1‑71 (MQ=255) cAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTg < 1:2766083/71‑1 (MQ=255) aTGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:6858837/1‑71 (MQ=255) aTGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:6616783/1‑71 (MQ=255) tGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaa < 1:5415929/63‑1 (MQ=255) gTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttg > 1:4338185‑M2/1‑39 (MQ=255) gTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:4618308/56‑1 (MQ=255) tCCACCTAAGGTTATGAACAAATgtatttctgcttttaatttg < 1:1177208‑M1/43‑21 (MQ=255) tCCACCTAAGGTTATGAACAAATgtatttctgcttttaatttg < 1:1801141‑M1/43‑21 (MQ=255) tCCACCTAAGGTTATGAACAAATgtatttctgcttttaatttg < 1:3983461‑M1/43‑21 (MQ=255) tCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACgg < 1:7854602/71‑1 (MQ=255) tCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACg < 1:2541465/70‑1 (MQ=255) tCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACg < 1:5832658/70‑1 (MQ=255) ccACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACggg > 1:1392961/1‑71 (MQ=255) cACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGc < 1:4150034/57‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACgggg > 1:6078657/1‑70 (MQ=255) tAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa > 1:6372443/1‑71 (MQ=255) tAAGGTGATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa > 1:8307/1‑71 (MQ=255) aaGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa > 1:2815734/1‑70 (MQ=255) aGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa < 1:1254828/69‑1 (MQ=255) aGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAata > 1:6504208/1‑71 (MQ=255) ggTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAatat > 1:2133344/1‑71 (MQ=255) gTTATGAACAAATTAAAAGCAGAAATACatttgttca > 1:6410858‑M2/1‑28 (MQ=255) gTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg > 1:1450291/1‑71 (MQ=255) gTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg > 1:1979669/1‑71 (MQ=255) gTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg > 1:5158005/1‑71 (MQ=255) tATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGc > 1:6999871/1‑70 (MQ=255) aTGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTg < 1:4383124/45‑1 (MQ=255) aTGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCa > 1:6831106/1‑70 (MQ=255) tGAACAAATgtatttctgcttttaatttgttcataac > 1:6410858‑M1/1‑9 (MQ=255) tGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCaaa > 1:3228360/1‑71 (MQ=255) gAACAAATgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttccgacgaa > 1:2333391‑M1/1‑8 (MQ=255) gAACAAATTAAAAGCAGAAATACATTTGTTCAAAAc < 1:306063/36‑1 (MQ=255) gAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCt > 1:7012442/1‑42 (MQ=255) gAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCt > 1:6641646/1‑42 (MQ=255) gAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaa < 1:4268424/61‑1 (MQ=255) aaCAAATgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttccgacgaataga < 1:7176223‑M1/71‑65 (MQ=255) aaCAAATgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttccgacgaataga < 1:7855698‑M1/71‑65 (MQ=255) aCAAATgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttccgacgaataga < 1:4744570‑M1/70‑65 (MQ=255) aCAAATgtatttctgcttttaatttgttcataaccttaggtggacattgcacatattt < 1:6144083‑M1/58‑53 (MQ=255) aCAAATTAAAAGCAGAAATACatttgttcataaccttaggtggacattgcacatatttccgacgaa < 1:2557366‑M2/66‑46 (MQ=255) aCAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGa < 1:6235539/71‑1 (MQ=255) cAAATgtatttctgcttttaatttgttcataaccttaggtggac > 1:4338185‑M1/1‑5 (MQ=255) cAAATTAAAAGCAGAAATACatttgttcataaccttaggtgga < 1:3983461‑M2/43‑24 (MQ=255) cAAATTAAAAGCAGAAATACatttgttcataaccttaggtgga < 1:1177208‑M2/43‑24 (MQ=255) cAAATTAAAAGCAGAAATACatttgttcataaccttaggtgga < 1:1801141‑M2/43‑24 (MQ=255) cAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAAc > 1:2714086/1‑68 (MQ=255) aaaTgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttcc < 1:723761‑M1/58‑55 (MQ=255) aaaTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaa < 1:1792635/43‑1 (MQ=255) aaaTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaa < 1:4972289/43‑1 (MQ=255) aaaTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGt > 1:3434728/1‑71 (MQ=255) aaaTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGt < 1:3651957/71‑1 (MQ=255) aTgtatttctggttttaatttgttcataaccttag < 1:5291988‑M1/35‑34 (MQ=255) aTgtatttctgcttttaatttgttcataaccttaggtggacattgcacatatttccgacgaat < 1:6427246‑M1/63‑62 (MQ=255) aTTAAAAGCAGAAATACatttgttcataaccttaggtggacattgcacatatttccgacgaa > 1:3504662‑M2/1‑17 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:7006810/1‑47 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:5637531/1‑47 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:5378364/1‑47 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGa < 1:7862308/71‑1 (MQ=255) ttAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACTAGTGAt < 1:1023535/71‑1 (MQ=255) ttAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGAt < 1:6846887/71‑1 (MQ=255) | TCAAAATAGCATAAATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGAT > W3110S.gb/1603079‑1603218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |