| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2387449 | 49 (0.600) | 3 (0.040) | 3/88 | NT | 5.4% | coding (67/1212 nt) | elaD | hypothetical protein |
| ? | W3110S.gb | = 2387475 | 62 (0.850) | coding (93/1212 nt) | elaD | hypothetical protein | |||||
GGAGCCCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2387376‑2387449‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagTAATTCCTCGGTCACAGTAAATTTTTCTGCAAATGTCTGACTGAGTTGCGTTTGAGATAATTGAC < W3110S.gb/2387475‑2387411 GGAGCCCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG < 1:1693802/71‑1GGAGCCCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG < 1:679056/71‑1 CCCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG < 1:4616637/67‑1 CCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTT < 1:7304456/65‑1 TGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTT > 1:5900230/1‑62 GCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGTAATTCCTCGGTCACAGTAAATT > 1:4602654/1‑71 AATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG > 1:2033626/1‑43 AATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG > 1:5256395/1‑43 AATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTG > 1:6383679/1‑43 AACTCAGTCAGACATTTGCAGTAATTCCTCGGTCACAGTAAATTTTTCT < 1:4244752/49‑1 CTCAGTCAGACATTTGCAGTAATTCCTCGGTCACAGTAAATTTTTCTGC > 1:1669951/1‑49 TGCAGTAATTCCTCGGTCACAGTAAATTTTTCTGCAAATGTCTGACTGAGTTGCGTTTGAGATAATTGAC > 1:3246040/1‑70 CAGTAATTCCTCGGTCACAGTAAATTTTTCTGCAAATGTCTGA > 1:6977712/1‑43 AGTAATTCCTCGGTCACAGTAAATTTTTCTGCAAATGTCTGA > 1:2411507/1‑42 GGAGCCCATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2387376‑2387449‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagTAATTCCTCGGTCACAGTAAATTTTTCTGCAAATGTCTGACTGAGTTGCGTTTGAGATAATTGAC < W3110S.gb/2387475‑2387411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |