| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2387449 | 49 (0.600) | 3 (0.040) | 3/88 | NT | 5.4% | coding (67/1212 nt) | elaD | hypothetical protein |
| ? | W3110S.gb | = 2387475 | 62 (0.850) | coding (93/1212 nt) | elaD | hypothetical protein | |||||
ATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCG > W3110S.gb/2387405‑2387544 | attattGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTa > 1:6539751/1‑71 (MQ=255) attGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTa > 1:1935/1‑68 (MQ=255) gTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTActgca > 1:3246040‑M2/1‑65 (MQ=255) gTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAg > 1:7152932/1‑71 (MQ=255) aaTTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCt > 1:6414899/1‑71 (MQ=255) tATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCtt > 1:4161531/1‑69 (MQ=255) aTCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTa > 1:5904521/1‑70 (MQ=255) aaaCGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCTAGGAATTACTGCAGTCTTTaaaaaa < 1:2369122/70‑1 (MQ=255) aCTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTa > 1:4735206/1‑46 (MQ=255) cTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGtt < 1:7661927/71‑1 (MQ=255) cTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGt > 1:1546781/1‑70 (MQ=255) tcagtcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTa > 1:1453148/1‑71 (MQ=255) agtcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTAt < 1:5967379/70‑1 (MQ=255) agtcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTAt < 1:5958153/70‑1 (MQ=255) gtcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:3070235/71‑1 (MQ=255) tcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTActg > 1:6977712‑M2/1‑40 (MQ=255) tcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTAct > 1:2411507‑M2/1‑40 (MQ=255) tcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCg > 1:1329037/1‑64 (MQ=255) tcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCg > 1:78827/1‑64 (MQ=255) tcagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCg > 1:1234412/1‑64 (MQ=255) cagACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTaaaaaaaa > 1:7760118/1‑58 (MQ=255) agACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCg > 1:2570628/1‑69 (MQ=255) aTTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTc < 1:3275581/42‑1 (MQ=255) aTTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGGTATCCGGAGATg < 1:743268/71‑1 (MQ=255) ttGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATg > 1:3162971/1‑69 (MQ=255) gCAGAAAAATTTACTGTGACTGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATgaag > 1:3684827/1‑70 (MQ=255) gCAGAAAAATTTACTGTGACCGAGGAATTActgcaaatgtctgactgag > 1:1669951‑M2/1‑30 (MQ=255) gCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACa < 1:5542556/51‑1 (MQ=255) gCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATgaag < 1:6238864/70‑1 (MQ=255) cAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATgaaga < 1:766951/70‑1 (MQ=255) aGAAAAATTTACTGTGACCGAGGAATTActgcaaatgtctgactgagtt < 1:4244752‑M2/49‑22 (MQ=255) aGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCttt < 1:186313/39‑1 (MQ=255) aGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGAGTTATCCGGAGATGAAGaaa < 1:4479382/71‑1 (MQ=255) gAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAg > 1:7454621/1‑71 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTaaaa > 1:1615984/1‑39 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTaaaa > 1:4320238/1‑39 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATga > 1:6572717/1‑62 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAt > 1:3885990/1‑71 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAt > 1:6496182/1‑71 (MQ=255) aaaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAt > 1:6965192/1‑71 (MQ=255) aaTTTACTGTGACCGATGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAtt < 1:2764308/71‑1 (MQ=255) aaTTTACTGTGACCGAGGAATTActgcaaatgtctgactgagttgcgtttgagataattgacaataattgc > 1:4602654‑M2/1‑23 (MQ=255) aaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGaaa > 1:144130/1‑66 (MQ=255) aaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAtt > 1:1474705/1‑71 (MQ=255) aaTTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAtt > 1:617790/1‑71 (MQ=255) tttACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGa < 1:1429958/71‑1 (MQ=255) tACTGTGACCGAGGAATTACTGCAGTCTTTaaaaaaaa > 1:1944787/1‑38 (MQ=255) tACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGt > 1:1035886/1‑71 (MQ=255) tACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGt > 1:7132790/1‑71 (MQ=255) tACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGt > 1:574559/1‑71 (MQ=255) tACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGt > 1:6100702/1‑71 (MQ=255) cTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTa < 1:6178581/71‑1 (MQ=255) cTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTa > 1:6742933/1‑71 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGgaga < 1:814628/49‑1 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTAc < 1:3760417/69‑1 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTg > 1:6142130/1‑71 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTg > 1:2683927/1‑71 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTg > 1:6924316/1‑71 (MQ=255) tgACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTg > 1:6151446/1‑71 (MQ=255) tgACAGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTg > 1:7705220/1‑71 (MQ=255) gACCGAGTAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:1464667/43‑1 (MQ=255) gACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:1478042/43‑1 (MQ=255) gACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:6470779/43‑1 (MQ=255) gACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:2797930/43‑1 (MQ=255) gACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATcc < 1:2807251/43‑1 (MQ=255) aCCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCa > 1:6132491/1‑71 (MQ=255) ccGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCat < 1:1888166/71‑1 (MQ=255) ccGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCa < 1:95187/70‑1 (MQ=255) cGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCata < 1:5421284/71‑1 (MQ=255) gAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATgaaga > 1:1689483/1‑50 (MQ=255) aGGAATTACTACAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAg > 1:1006453/1‑59 (MQ=255) ggAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCataata > 1:5764906/1‑71 (MQ=255) gAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCgg > 1:762896/1‑38 (MQ=255) gAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCgg > 1:2257456/1‑38 (MQ=255) gAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGtt < 1:6571211/59‑1 (MQ=255) aTTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATAtt < 1:7152524/70‑1 (MQ=255) ttACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGc < 1:7105678/71‑1 (MQ=255) aCTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCg < 1:7728180/70‑1 (MQ=255) | ATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCG > W3110S.gb/2387405‑2387544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |