New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	2891111 =	49 (0.600)	5 (0.070)	3/86	NT	11.4%	coding (242/366 nt)	ygcM	6‑pyruvoyl tetrahydrobiopterin synthase
	?	W3110S.gb	2891133 =	35 (0.490)					coding (264/366 nt)	ygcM	6‑pyruvoyl tetrahydrobiopterin synthase

ACCGCACTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/2891186‑2891111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttttAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAAAC  >  W3110S.gb/2891133‑2891201                                                                                                                                                   ACCGCACTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTGGCTGGTTGG                                                                            <  1:1539900/71‑1     CACTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTT                                                                        >  1:3963564/1‑71     CACTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTT                                                                        >  1:1714153/1‑71       CTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTT                                                                        <  1:3261081/69‑1                             TAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGT                                                                          >  1:5141773/1‑45                                CCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT                                                                       >  1:1463299/1‑45                                  TGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT                                                                       <  1:6935193/43‑1                                    ATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT                                                                       >  1:3116483/1‑41                                    ATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT                                                                       >  1:617406/1‑41                                                        AAACCTCGCTGGTTGGGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTG                     >  1:1544416/1‑71                                                        AAACCTCGCTGGTTGGGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAG                       <  1:2664765/69‑1                                                        AAACCTCGCTGGTTGGGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAG                       <  1:6574986/69‑1                                                              CGCTGGTTGGGTTTTAGCAAAATGGATTTGGGATCAGGT                                               >  1:415684/1‑39                                                              CGCTGGTTGGGTTTTAGCAAAATGGATTTGGGATCAGGT                                               >  1:6113385/1‑39                                                                       GGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAA         >  1:6804421/1‑68                                                                        GTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGA     <  1:20981/71‑1                                                                        GTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCG                               <  1:824815/45‑1                                                                         TTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCt                               <  1:6993013/44‑2                                                                         TTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAA    <  1:463974/71‑1                                                                         TTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAA    <  1:1156287/71‑1                                                                         TTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTT                          <  1:5444797/49‑1                                                                           TTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAAAC  >  1:336233/1‑71                                                                           TTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGC                              >  1:6543468/1‑43                                                                           TTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCC                                >  1:6087594/1‑41                                                                                                                                                   ACCGCACTTAACAGCGGCACAACGGGTTTAACCTGATCCCAAATCCATTTTGCTAAAACCTCGCTGGTTGGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/2891186‑2891111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttttAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAAAC  >  W3110S.gb/2891133‑2891201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.