| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3261133 | 0 (0.000) | 46 (0.620) | 33/90 | NT | 100% | intergenic (‑59/‑69) | tdcE/insH | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein |
| ? | W3110S.gb | 3262333 = | 0 (0.000) | coding (1183/1296 nt) | tdcD | propionate kinase/acetate kinase C, anaerobic | |||||
ATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3261061‑3261133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGAC > W3110S.gb/3262333‑3262402 ATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTT < 1:2884159/71‑1ATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTT < 1:2561086/71‑1ATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTT < 1:3694684/71‑1 TCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAC > 1:17296/1‑71 TCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAC > 1:4296979/1‑71 TCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAA > 1:6416573/1‑70 TACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTT > 1:507862/1‑71 CCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTT < 1:7230733/70‑1 CTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGC > 1:2296182/1‑71 TCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGC > 1:5060998/1‑69 TCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGC > 1:6907686/1‑69 ATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTA < 1:4179622/70‑1 ATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTA < 1:6635109/70‑1 ATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTA < 1:1683637/70‑1 TGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAA > 1:4391400/1‑71 AAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAAT > 1:1232289/1‑70 ATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATG < 1:6561577/71‑1 TAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATG < 1:4394139/70‑1 ATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCA < 1:4824619/71‑1 TCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCA > 1:7493268/1‑70 CTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAA < 1:2090097/45‑1 CTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAA < 1:3441420/45‑1 TACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCA < 1:5033860/68‑1 TACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATG < 1:2645485/61‑1 TACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGA > 1:4594016/1‑58 TACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTA > 1:7218475/1‑43 TACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTA > 1:209248/1‑43 CAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGC < 1:297896/70‑1 CAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGC > 1:652861/1‑70 TACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCA > 1:821339/1‑68 TACTTCAACAAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAAT > 1:2382985/1‑70 CTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCAT > 1:995035/1‑71 CTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCAT < 1:316558/71‑1 CTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAA > 1:4626727/1‑48 TTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGA < 1:6769079/50‑1 AACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:821864/70‑1 AACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAG < 1:5240603/60‑1 ACTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAA > 1:1105648/1‑42 CTAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGC > 1:3495727/1‑50 TAAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCT > 1:2880822/1‑71 AAATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCGAAAGCAATGATTTTTTCT > 1:6009901/1‑70 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTC < 1:6010944/71‑1 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAAT > 1:1135338/1‑59 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAA > 1:3804616/1‑54 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAA > 1:3795366/1‑54 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGA < 1:3842458/42‑1 AATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGA < 1:555421/42‑1 ATTATGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCG < 1:966578/71‑1 TGCAAATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAG > 1:153378/1‑71 ATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGA < 1:3557367/71‑1 ATTCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTAGTTAGTCG > 1:623456/1‑69 TCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAA > 1:7835096/1‑70 TCTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAA < 1:4414998/46‑1 CTGCGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAT < 1:6895397/70‑1 CGGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAAC < 1:750227/70‑1 GGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGG < 1:2985905/71‑1 GGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:2942562/48‑1 GGGCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:7175569/48‑1 GCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:20916/46‑1 GCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:2669656/46‑1 GCGCGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTT < 1:3626625/46‑1 CGTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAA < 1:3538558/71‑1 GTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAA < 1:6086627/71‑1 TTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAT < 1:2108917/71‑1 TTAACTTTGCCTAAATGAATGGCATCCAAAGCAAT < 1:2140728/35‑1 TAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAT > 1:4768671/1‑70 AACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAG < 1:2310951/50‑1 ACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGAC < 1:2911630/71‑1 ACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGA > 1:644683/1‑70 ACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAG < 1:228136/49‑1 ATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3261061‑3261133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGAC > W3110S.gb/3262333‑3262402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |