| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3261133 | 0 (0.000) | 46 (0.620) | 33/90 | NT | 100% | intergenic (‑59/‑69) | tdcE/insH | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein |
| ? | W3110S.gb | 3262333 = | 0 (0.000) | coding (1183/1296 nt) | tdcD | propionate kinase/acetate kinase C, anaerobic | |||||
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGACA > W3110S.gb/3262263‑3262403 | tctaccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaac > 1:17296‑M2/71‑71 (MQ=255)tctaccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaac > 1:4296979‑M2/71‑71 (MQ=255) taccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCtt > 1:507862‑M2/69‑71 (MQ=255) ccttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCttt < 1:7230733‑M2/4‑1 (MQ=255) cttcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGc > 1:2296182‑M2/66‑71 (MQ=255) tcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGc > 1:6907686‑M2/64‑69 (MQ=255) tcatgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGc > 1:5060998‑M2/64‑69 (MQ=255) atgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTa < 1:4179622‑M2/9‑1 (MQ=255) atgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTa < 1:1683637‑M2/9‑1 (MQ=255) atgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTa < 1:6635109‑M2/9‑1 (MQ=255) tgaaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTaaa > 1:4391400‑M2/61‑71 (MQ=255) aaaaataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaat > 1:1232289‑M2/59‑70 (MQ=255) ataatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaatg < 1:6561577‑M2/17‑1 (MQ=255) taatctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaatg < 1:4394139‑M2/17‑1 (MQ=255) atctctctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCa < 1:4824619‑M2/20‑1 (MQ=255) tctacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCa > 1:7493268‑M2/47‑70 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatgaatg < 1:2645485‑M2/17‑1 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatga > 1:4594016‑M2/45‑58 (MQ=255) tacaatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCa < 1:5033860‑M2/24‑1 (MQ=255) caatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGc > 1:652861‑M2/43‑70 (MQ=255) caatacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGc < 1:297896‑M2/28‑1 (MQ=255) tacttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCa > 1:821339‑M2/40‑68 (MQ=255) tacttcaacaaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAAt > 1:2382985‑M2/40‑70 (MQ=255) cttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTaaa > 1:4626727‑M2/38‑48 (MQ=255) cttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAt > 1:995035‑M2/38‑71 (MQ=255) cttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAt < 1:316558‑M2/34‑1 (MQ=255) ttcaactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatga < 1:6769079‑M2/14‑1 (MQ=255) aactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAg < 1:5240603‑M2/27‑1 (MQ=255) aactaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:821864‑M2/37‑1 (MQ=255) actaaattatgcaaattctgcgggcgcgttaaCTTTGCCTaa > 1:1105648‑M2/33‑42 (MQ=255) ctaaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGc > 1:3495727‑M2/32‑50 (MQ=255) taaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttct > 1:2880822‑M2/31‑71 (MQ=255) aaattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCGAAAGCAATGATTTTttct > 1:6009901‑M2/30‑70 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatga < 1:3842458‑M2/14‑1 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAaatga < 1:555421‑M2/14‑1 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCaaa > 1:3795366‑M2/29‑54 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCaaa > 1:3804616‑M2/29‑54 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAAt > 1:1135338‑M2/29‑59 (MQ=255) aattatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTttcttc < 1:6010944‑M2/43‑1 (MQ=255) attatgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCg < 1:966578‑M2/44‑1 (MQ=255) tgcaaattctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAg > 1:153378‑M2/24‑71 (MQ=255) attctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGa < 1:3557367‑M2/53‑1 (MQ=255) attctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTAGTTAGTCg > 1:623456‑M2/19‑69 (MQ=255) tctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCaa < 1:4414998‑M2/30‑1 (MQ=255) tctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGaa > 1:7835096‑M2/17‑70 (MQ=255) ctgcgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAAt < 1:6895397‑M2/55‑1 (MQ=255) cgggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAAc < 1:750227‑M2/58‑1 (MQ=255) gggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:2942562‑M2/37‑1 (MQ=255) gggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:7175569‑M2/37‑1 (MQ=255) gggcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACgg < 1:2985905‑M2/60‑1 (MQ=255) gcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:2669656‑M2/37‑1 (MQ=255) gcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:20916‑M2/37‑1 (MQ=255) gcgcgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCAtttt < 1:3626625‑M2/37‑1 (MQ=255) cgttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACaa < 1:3538558‑M2/65‑1 (MQ=255) gttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACaaa < 1:6086627‑M2/66‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAAt < 1:2140728‑M2/31‑1 (MQ=255) ttaaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAt < 1:2108917‑M2/67‑1 (MQ=255) taaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAAt > 1:4768671‑M2/4‑70 (MQ=255) aaCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAg < 1:2310951‑M2/48‑1 (MQ=255) aCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAg < 1:228136‑M2/48‑1 (MQ=255) aCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGa > 1:644683‑M2/2‑70 (MQ=255) aCTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGAc < 1:2911630‑M2/70‑1 (MQ=255) cTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGcaca < 1:6373759/64‑1 (MQ=255) cTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGcaca < 1:287855/64‑1 (MQ=255) cTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGaca > 1:810539/1‑71 (MQ=255) | TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAACTTTGCCTAAATGAATGGCATCCAAAGCAATCATTTTTTCTTCGTTAGTCGGAATAACGGCACAAATGACA > W3110S.gb/3262263‑3262403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |