| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3575922 = | 54 (0.660) | 5 (0.070) | 3/88 | NT | 10.0% | coding (313/711 nt) | yihL | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 3575940 = | 42 (0.570) | coding (295/711 nt) | yihL | predicted DNA‑binding transcriptional regulator | |||||
AGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3575996‑3575922‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGCCGACAGCTCCGGACTGTAA > W3110S.gb/3575940‑3576007 AGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAA < 1:3585616/71‑1 GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAA < 1:3419342/71‑1 GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAA < 1:3860675/70‑1 CTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAA < 1:4930232/70‑1 GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAA > 1:6331448/1‑63 GCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGGTTAACGAGAAAA > 1:3536103/1‑46 CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAAC < 1:5652642/47‑1 GGGGTTTACCGAGAAAAACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGC < 1:2954963/69‑1 GGGGTTTACCGAGAAAAACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGC < 1:3307165/69‑1 GGGGTTTACCGAGAAAAACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGC < 1:4368607/69‑1 GGTTTACCGAGAAAAACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTG < 1:4181303/48‑1 TTTACCGAGAAAAACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCG > 1:1625375/1‑48 AACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGCCGACAGCTCCGGACTGT < 1:1001847/70‑1 AACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCG < 1:2518456/41‑1 AACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCG < 1:4931940/41‑1 ACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGCCGACAGCTCCGGACTGTAA > 1:861290/1‑71 ACCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCG > 1:5904335/1‑35 CCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGCCGACAGC < 1:2415719/58‑1 CCCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAA > 1:6695323/1‑45 CCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTG > 1:7530731/1‑41 AGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3575996‑3575922‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccCCCAGGAAGGCTCTCGCCCTTGCTCAATTGCGGCCCGCTGAAAGCTCGCCGACAGCTCCGGACTGTAA > W3110S.gb/3575940‑3576007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |