| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4460585 = | 143 (1.760) | 9 (0.120) | 5/90 | NT | 6.8% | coding (119/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | W3110S.gb | 4460604 = | 116 (1.550) | coding (138/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
CAGATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4460658‑4460585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATTGGCAA > W3110S.gb/4460604‑4460672 CAGATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTA < 1:6690068/71‑1 ATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG > 1:2271048/1‑71 ATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG < 1:258747/71‑1 ATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG > 1:2935208/1‑71 ATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG < 1:5673130/71‑1 ATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAG > 1:1899575/1‑70 TGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAA > 1:4136668/1‑62 TGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAG > 1:7340867/1‑47 ATGCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGC < 1:3371721/49‑1 ATGCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGC < 1:6871658/49‑1 TGCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCC < 1:3670305/69‑1 GCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTC < 1:4134379/57‑1 GCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGG > 1:6773137/1‑38 GCCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGG > 1:87438/1‑38 CCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGG > 1:7660113/1‑69 CCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCG > 1:7669122/1‑68 CCTTGCTTCTCAAGTAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGC > 1:6811990/1‑63 AGTAAGGCATTGAGCTGATTCAGGGGTACGATGACAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATT < 1:2966111/71‑1 GGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATTGTCAA > 1:1828941/1‑71 CAGATCCGGCTGCGGCTCGAGCTGGCTGGCATCGTACCCCTGAATCAGCTCAATGCCTTGCTTCTCAAGTAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4460658‑4460585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATTGGCAA > W3110S.gb/4460604‑4460672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |