| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4632965 | 90 (1.110) | 6 (0.080) | 3/88 | NT | 7.1% | coding (969/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase |
| ? | W3110S.gb | = 4632980 | 77 (1.050) | coding (984/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase | |||||
TGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4632892‑4632965‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgaaCGGATGTTCCCGCCCTTCGTACTTTTTGCAGAACGCCTGAGTGGTGACAAAATCGGTATCGATAAATG < W3110S.gb/4632980‑4632913 TGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTAC < 1:4225312/71‑1TGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTAC < 1:892795/71‑1 AAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACG > 1:2586590/1‑70 ATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGCCCTTCG < 1:1301727/71‑1 CCACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGC < 1:1854206/42‑1 CCACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGC < 1:4297971/42‑1 CCACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGC < 1:4429925/42‑1 CCACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGC < 1:6175748/42‑1 ACTCAGGCGTTCTGCAAAAAGTACGAACGGATGTTCCCGCCC > 1:2027538/1‑42 ACGAACGGATGTTCCCGCCCTTCGTACTTTTTGCAGAACGCCTGAGTGGTGACAAAATCGGTATCGATAAA > 1:477477/1‑71 ACGAACGGATGTTCCCGCCCTTCGTACTTTTTGCAGAACGCCTGAGTGGTGACAAAATCGGTATCGATAAA > 1:6483360/1‑71 GAACGGATGTTCCCGCCCTTCGTACTTTTTGCAGAACGCCTGAGTGGTGACAAAATCGGTATCGATAAATG < 1:7060865/71‑1 TGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4632892‑4632965‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgaaCGGATGTTCCCGCCCTTCGTACTTTTTGCAGAACGCCTGAGTGGTGACAAAATCGGTATCGATAAATG < W3110S.gb/4632980‑4632913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |