| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4632965 | 90 (1.110) | 6 (0.080) | 3/88 | NT | 7.1% | coding (969/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase |
| ? | W3110S.gb | = 4632980 | 77 (1.050) | coding (984/1233 nt) | nadR | bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase | |||||
Only 100 of 129 total aligned reads displayed.
CATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCGTGG > W3110S.gb/4632913‑4633049 | cATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGttc < 1:7060865‑M2/71‑4 (MQ=255) tttATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGttcgt > 1:6483360‑M2/1‑66 (MQ=255) ttATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg > 1:3579916/1‑71 (MQ=255) ttATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg > 1:3163469/1‑71 (MQ=255) ttATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg > 1:4489447/1‑71 (MQ=255) tATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg < 1:4041378/70‑1 (MQ=255) tATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg > 1:5668900/1‑70 (MQ=255) tATCGATACCGATTTCGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg < 1:3880484/70‑1 (MQ=255) aTCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCTGGAACATCCGTTCGTg > 1:3954989/1‑69 (MQ=255) aTCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTg > 1:2257295/1‑69 (MQ=255) tCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAg < 1:6652077/71‑1 (MQ=255) cGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc < 1:2701720/68‑1 (MQ=255) aTACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcg > 1:5227800/1‑71 (MQ=255) tACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAATGGCGGGAACATCCGTTCGTGCAGgcgc > 1:6386509/1‑71 (MQ=255) aCCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc > 1:1054004/1‑64 (MQ=255) aCCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc > 1:1989418/1‑64 (MQ=255) aCCGATTTTGTCACCACTCAGGCGTTATGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc > 1:3196949/1‑64 (MQ=255) aTTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgatt < 1:5553681/71‑1 (MQ=255) ttttGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattg < 1:1196284/71‑1 (MQ=255) tttGTCACCACTCAGTCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattga > 1:5161788/1‑71 (MQ=255) tttGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtga < 1:3297481/67‑1 (MQ=255) ttGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtga < 1:2305434/66‑1 (MQ=255) tCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc < 1:5423650/54‑1 (MQ=255) tCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc < 1:3449876/54‑1 (MQ=255) tCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc < 1:7611425/54‑1 (MQ=255) tCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattg < 1:3304105/66‑1 (MQ=255) accacTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCt < 1:2932601/59‑1 (MQ=255) ccacTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATAc > 1:7527213/1‑71 (MQ=255) ccacTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATAc > 1:7627305/1‑71 (MQ=255) cacTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATAc > 1:4820733/1‑70 (MQ=255) acTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCg > 1:4844526/1‑71 (MQ=255) cTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCg > 1:2277057/1‑41 (MQ=255) cTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCg > 1:6953043/1‑41 (MQ=255) cTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCg > 1:4840425/1‑41 (MQ=255) cTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCg > 1:1055603/1‑41 (MQ=255) aGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGtt < 1:4255577/69‑1 (MQ=255) aGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTc > 1:6499154/1‑71 (MQ=255) gCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGa > 1:1263628/1‑71 (MQ=255) gCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGa > 1:5489391/1‑71 (MQ=255) cGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGAt < 1:411531/71‑1 (MQ=255) gTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATc < 1:4652600/71‑1 (MQ=255) gTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATc > 1:1874732/1‑71 (MQ=255) gTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATc < 1:6998414/71‑1 (MQ=255) tGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatga < 1:7746602/53‑1 (MQ=255) tGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTgg > 1:153633/1‑70 (MQ=255) tGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGt > 1:7820678/1‑71 (MQ=255) gCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGc > 1:5238611/1‑36 (MQ=255) gCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGTCGCTGATTGATGAATACCGTTTCGATCTGGt > 1:3867060/1‑70 (MQ=255) gCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattgat > 1:859726/1‑50 (MQ=255) gCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattga > 1:4654070/1‑49 (MQ=255) gCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgattga > 1:4663180/1‑49 (MQ=255) cAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGgc > 1:2401142/1‑39 (MQ=255) cAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTg < 1:3985570/70‑1 (MQ=255) cAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGa > 1:66534/1‑71 (MQ=255) cAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGa > 1:1160171/1‑71 (MQ=255) aaaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCtgatt < 1:877975/45‑1 (MQ=255) aaaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGAt > 1:5130999/1‑63 (MQ=255) aaaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATc > 1:1763003/1‑64 (MQ=255) aaaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGAt > 1:4713612/1‑71 (MQ=255) aaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGgcgc > 1:1732172/1‑39 (MQ=255) aaaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATc > 1:3865637/1‑71 (MQ=255) aaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTg > 1:5950770/1‑64 (MQ=255) aaaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATcc > 1:4641536/1‑71 (MQ=255) aaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTg > 1:850425/1‑63 (MQ=255) aaGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCct > 1:2396776/1‑71 (MQ=255) aGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCctg > 1:3533556/1‑71 (MQ=255) aGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCct > 1:4773795/1‑70 (MQ=255) gTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCctgc < 1:5430262/71‑1 (MQ=255) cGAAGGGCGGGAACATCCGttcgtactttttgcagaacgcctgagtggtgacaaaatcggtatcgataaat < 1:1301727‑M2/71‑53 (MQ=255) cGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTgg < 1:4748010/71‑1 (MQ=255) cGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTgg < 1:4068266/71‑1 (MQ=255) cGAAGGGCGGGAACATCCGATCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCctgctg < 1:7385611/70‑1 (MQ=255) gAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatga < 1:402171/41‑1 (MQ=255) gAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatga < 1:6771800/41‑1 (MQ=255) gAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATtgatg < 1:4473170/40‑1 (MQ=255) aGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGgag > 1:136299/1‑70 (MQ=255) gggCGGGAACATCCGttcgtactttttgcagaacgcctgagt > 1:2027538‑M2/1‑15 (MQ=255) gggCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCctg < 1:116411/63‑1 (MQ=255) gCGGGAACATCCGttcgtactttttgcagaacgcctgagtgg < 1:1854206‑M2/42‑30 (MQ=255) gCGGGAACATCCGttcgtactttttgcagaacgcctgagtgg < 1:4297971‑M2/42‑30 (MQ=255) gCGGGAACATCCGttcgtactttttgcagaacgcctgagtgg < 1:4429925‑M2/42‑30 (MQ=255) gCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGTTGATCCTGCTGGAGaa > 1:3113656/1‑69 (MQ=255) gCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGCTCCTGCTGgaga > 1:5546901/1‑68 (MQ=255) gCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGaaca < 1:1733736/71‑1 (MQ=255) cGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGaaca < 1:1963086/70‑1 (MQ=255) aCATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGAt > 1:3642457/1‑43 (MQ=255) aCATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATc > 1:2978061/1‑44 (MQ=255) aTCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCct < 1:4248253/52‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTg < 1:2245691/43‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTg < 1:3346129/43‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGaac < 1:7857704/61‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCgt < 1:6792461/71‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCgt < 1:2102578/71‑1 (MQ=255) tCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCg > 1:4119251/1‑70 (MQ=255) ccGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTgg > 1:1002740/1‑55 (MQ=255) ccGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCgtg > 1:1748823/1‑71 (MQ=255) ccGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCgt > 1:3039346/1‑70 (MQ=255) cGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGAt > 1:452996/1‑38 (MQ=255) cGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGaa > 1:1818571/1‑58 (MQ=255) cGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCgtgg < 1:109717/71‑1 (MQ=255) | CATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCGTGG > W3110S.gb/4632913‑4633049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |