| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 144523 = | 68 (0.840) | 6 (0.080) | 3/88 | NT | 7.8% | intergenic (+51/‑54) | yadH/yadI | predicted transporter subunit/predicted PTS Enzyme IIA |
| ? | W3110S.gb | 144548 = | 81 (1.110) | intergenic (+76/‑29) | yadH/yadI | predicted transporter subunit/predicted PTS Enzyme IIA | |||||
Only 100 of 106 total aligned reads displayed.
GACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTA > W3110S.gb/144453‑144591 | gacgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCa > 1:5877524/1‑71 (MQ=255)gacgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCa > 1:5517813/1‑71 (MQ=255) gtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAccc > 1:1079164/1‑71 (MQ=255) gtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAccc < 1:4466851/71‑1 (MQ=255) gtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAccc < 1:2598995/71‑1 (MQ=255) gcccggtcatcgtgacaggtaattaccaacctaacatcgccttcctccttagccgaaaatcagtctACCCt > 1:168426‑M1/67‑71 (MQ=255) cccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctACCCt < 1:5523146‑M1/5‑1 (MQ=255) cccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctACCCt < 1:4113467‑M1/5‑1 (MQ=255) ccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctACCctc > 1:464046‑M1/66‑70 (MQ=255) gTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCtt < 1:5275986/70‑1 (MQ=255) gTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCtt > 1:3057023/1‑70 (MQ=255) aGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaacaa > 1:624189/1‑71 (MQ=255) gCTAATGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaacaa < 1:7287430/70‑1 (MQ=255) aGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGt > 1:529468/1‑70 (MQ=255) gCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaac < 1:4192729/62‑1 (MQ=255) gCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaac < 1:7686765/62‑1 (MQ=255) tATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAggg > 1:7440892/1‑71 (MQ=255) tttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCa > 1:279228/1‑46 (MQ=255) tttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAggg < 1:1378431/69‑1 (MQ=255) tttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGt < 1:6101010/70‑1 (MQ=255) tttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTa < 1:3849784/71‑1 (MQ=255) tttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTa < 1:4100825/71‑1 (MQ=255) ttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAccc > 1:7735940/1‑48 (MQ=255) ttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAccc > 1:7726658/1‑48 (MQ=255) ttCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAggg > 1:394595/1‑68 (MQ=255) tcctctcctcTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTAt > 1:168287/1‑52 (MQ=255) tcctctcctcTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaaca > 1:4500801/1‑57 (MQ=255) tcctctcctcTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGa > 1:2470026/1‑71 (MQ=255) tcctctcctcTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGa > 1:6192873/1‑71 (MQ=255) tcctctcctcTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGa > 1:5336929/1‑71 (MQ=255) acccaacctaacatcgccttcctccttagccgaaaatcagtctACCCTTTATCAACAATGGTCAGGGTAg > 1:1815315‑M1/44‑70 (MQ=255) ctcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaacaa > 1:4060354/1‑54 (MQ=255) ctcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGa > 1:629159/1‑71 (MQ=255) aacctaacatcgccttcctccttagccgaaaatcagtctACCCt < 1:3215549‑M1/5‑1 (MQ=255) tcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCttt < 1:3141252/45‑1 (MQ=255) tcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCttt < 1:5190751/45‑1 (MQ=255) tcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCttt < 1:4243685/45‑1 (MQ=255) tcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTg < 1:6717987/69‑1 (MQ=255) tcctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAt > 1:4148133/1‑71 (MQ=255) cctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAtt > 1:7015192/1‑71 (MQ=255) cctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAtt > 1:1768288/1‑71 (MQ=255) ctctGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAttt < 1:1801375/71‑1 (MQ=255) taacatcgccttcctccttagccgaaaatcagtctACCCt > 1:7367296‑M1/36‑40 (MQ=255) aacatcgccttcctccttagccgaaaatcagtcta < 1:2758746‑M1/1‑1 (MQ=255) gATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAtttt > 1:3023247/1‑67 (MQ=255) gATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTc < 1:4208124/68‑1 (MQ=255) gATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGc > 1:1834361/1‑71 (MQ=255) aTTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGc > 1:2472869/1‑70 (MQ=255) tttGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAttt < 1:2732186/64‑1 (MQ=255) gggggAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag < 1:2893665/70‑1 (MQ=255) gggggAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag > 1:2756720/1‑70 (MQ=255) ttcctccttagccgaaaatcagtctACCCTTTATCAACAATGGTCAGGGTAGAc < 1:3261848‑M1/29‑1 (MQ=255) ttcctccttagccgaaaatcagtctACCCTTTATCAACAATGGTCAGGGTAGAc < 1:7589019‑M1/29‑1 (MQ=255) ttcctccttagccgaaaatcagtctACCCTTTATCAACAATGGTCAGGGTAGAc < 1:6989776‑M1/29‑1 (MQ=255) gggAGAGGAGTTTTGACGGCTATCACCCTTTATcaa < 1:520802/36‑1 (MQ=255) gggAGAGGAGTTTTGACGGCTATCACCCTTTATcaa < 1:5841135/36‑1 (MQ=255) gggAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAaggag > 1:3053861/1‑71 (MQ=255) ggAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAaggagg < 1:2193363/71‑1 (MQ=255) gagaGGAGTTTTGACGGCTATCACCCTTTATcaacaa > 1:5912306/1‑37 (MQ=255) gagaGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGAtt < 1:4767635/56‑1 (MQ=255) gagaGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAaggagg > 1:3006496/1‑70 (MQ=255) gagaGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAggagga < 1:297313/71‑1 (MQ=255) agagGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCa > 1:6519147/1‑42 (MQ=255) agagGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa < 1:7626121/71‑1 (MQ=255) agagGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa < 1:1997268/71‑1 (MQ=255) agagGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa < 1:4319936/71‑1 (MQ=255) ccttagccgaaaatcagtctACCCTTTATCAACAATGGTCAGGGTAg > 1:5461888‑M1/21‑47 (MQ=255) ggagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGc < 1:47678/71‑1 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGt > 1:4583499/1‑36 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAgg > 1:1627535/1‑40 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAgg > 1:4711980/1‑40 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGAc < 1:3001402/46‑1 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCg > 1:7280807/1‑55 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAg > 1:7784679/1‑68 (MQ=255) gagTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCg < 1:4474437/71‑1 (MQ=255) ttttGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACt < 1:7743325/44‑1 (MQ=255) gaaaatcagtctACCCTTTATCAACAATGGTCAgg > 1:1658835‑M1/13‑35 (MQ=255) tGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGt > 1:7250599/1‑69 (MQ=255) gACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTa < 1:7265994/70‑1 (MQ=255) gACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTa < 1:4640909/70‑1 (MQ=255) aCGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGc > 1:1260137/1‑49 (MQ=255) aCGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGc > 1:4965263/1‑49 (MQ=255) aCGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAaggag > 1:5384736/1‑56 (MQ=255) aCGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTa < 1:1443517/69‑1 (MQ=255) ggCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAaggagg < 1:138825/55‑1 (MQ=255) ggCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGtt < 1:1794103/71‑1 (MQ=255) cTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg < 1:2611548/71‑1 (MQ=255) cTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg < 1:6144691/71‑1 (MQ=255) cTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg < 1:3440946/71‑1 (MQ=255) tATCACCCTTTATCAACAATGGTCAGGGTAGACTGAttt < 1:1093708/39‑1 (MQ=255) aTCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTggg > 1:5998387/1‑70 (MQ=255) aTCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTggg > 1:5514473/1‑70 (MQ=255) aTCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTggg > 1:3179918/1‑70 (MQ=255) aTCACCCTTTATCAACAATGGTCAGGGAAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTggg > 1:3741629/1‑70 (MQ=255) tCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGt > 1:6554022/1‑70 (MQ=255) tCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGt < 1:6090750/70‑1 (MQ=255) tCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGt > 1:5718800/1‑70 (MQ=255) tCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGt < 1:7935912/70‑1 (MQ=255) cACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTa < 1:5267709/70‑1 (MQ=255) ACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTc > 1:4549753‑M1/1‑37 (MQ=255) | GACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTA > W3110S.gb/144453‑144591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |