| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 235806 | 92 (1.130) | 9 (0.120) | 6/90 | NT | 9.7% | coding (197/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids |
| ? | W3110S.gb | = 235822 | 83 (1.110) | coding (181/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids | |||||
Only 100 of 164 total aligned reads displayed.
CCACGTTTTTTCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATACGGTTGTTGGT > W3110S.gb/235737‑235876 | ccACGTTTTTTCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAAt < 1:6075316/71‑1 (MQ=255) ttttCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGTTGTCGGTACTCAAAATGACTTCg > 1:3594393/1‑71 (MQ=255) ttttCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCg > 1:138232/1‑71 (MQ=255) ttttCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCg > 1:6913883/1‑71 (MQ=255) tCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCa < 1:7763936/70‑1 (MQ=255) ccAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCaa < 1:5079250/70‑1 (MQ=255) gTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGtt < 1:6930027/71‑1 (MQ=255) ttATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtca > 1:2332703‑M1/1‑55 (MQ=255) ttATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:7397714/71‑1 (MQ=255) ttATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:6243958/71‑1 (MQ=255) tATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtcat > 1:262030‑M1/1‑54 (MQ=255) aTGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtt < 1:7931406‑M2/71‑3 (MQ=255) tGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCttt > 1:1333663‑M2/1‑68 (MQ=255) tGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCttt < 1:2513503‑M2/71‑4 (MQ=255) tGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCttt < 1:5833916‑M2/71‑4 (MQ=255) ggATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAAt > 1:7293641/1‑52 (MQ=255) ggATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAAt > 1:7549102/1‑63 (MQ=255) gATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTa < 1:2288170/71‑1 (MQ=255) gATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTa < 1:4015042/71‑1 (MQ=255) ccACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACg > 1:6575933/1‑71 (MQ=255) ccACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACg > 1:1070583/1‑71 (MQ=255) cACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACg < 1:7748526/70‑1 (MQ=255) cTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGa > 1:7349321/1‑47 (MQ=255) cTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGa > 1:5576942/1‑47 (MQ=255) cTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGa > 1:3401335/1‑47 (MQ=255) ggTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTc > 1:6388229/1‑69 (MQ=255) gTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtt > 1:6990700‑M2/1‑56 (MQ=255) tGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGt < 1:4142713/53‑1 (MQ=255) tGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGt < 1:1379880/53‑1 (MQ=255) tGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAA < 1:5432987‑M1/39‑1 (MQ=255) tGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAA < 1:4573579‑M1/39‑1 (MQ=255) tACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAgcgc > 1:6622506/1‑70 (MQ=255) tACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAgcgc > 1:7336463/1‑70 (MQ=255) cccTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtcatttt < 1:6300487‑M1/54‑21 (MQ=255) ccTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtttt > 1:103402‑M2/1‑49 (MQ=255) ccTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGAc > 1:7900127/1‑70 (MQ=255) cTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtcattttga > 1:3271162‑M1/1‑32 (MQ=255) cTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtcattttga > 1:1064907‑M1/1‑32 (MQ=255) cTGGCGGACATACTGGCTGTCGGTACTCAAAAgaacattgcgaagtcattttga > 1:4196932‑M1/1‑32 (MQ=255) cTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:6041276/48‑1 (MQ=255) gCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAAt < 1:1844201/69‑1 (MQ=255) gCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAg < 1:704836/71‑1 (MQ=255) gCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAg > 1:1242418/1‑71 (MQ=255) aCATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCgg > 1:858811/1‑70 (MQ=255) aCATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGc < 1:2180525/71‑1 (MQ=255) cATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:6440103/40‑1 (MQ=255) cATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:2508126/40‑1 (MQ=255) cATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGcc < 1:7137033/71‑1 (MQ=255) cATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGc > 1:79029/1‑70 (MQ=255) cATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTATTTTAACGCCTCCAGCGCGACAATAGCGGc > 1:3290848/1‑70 (MQ=255) aTACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAgcgc < 1:1619665/57‑1 (MQ=255) aTACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCa < 1:3019883/71‑1 (MQ=255) aTACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCa < 1:7511102/71‑1 (MQ=255) tACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtttt > 1:4668358‑M2/1‑38 (MQ=255) tACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtttt > 1:2201667‑M2/1‑38 (MQ=255) aCTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCt < 1:4938287/48‑1 (MQ=255) aCTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCt < 1:3418101/48‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:2664405/36‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:2829516/36‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:4598937/36‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTc < 1:1254205/36‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCtttt > 1:5139541‑M2/1‑36 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTaa > 1:7535266/1‑42 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTa < 1:3599138/41‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTa < 1:6795662/41‑1 (MQ=255) cTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGcc > 1:1790900/1‑46 (MQ=255) tGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTa > 1:3253523/1‑40 (MQ=255) tGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCaa > 1:1685488/1‑71 (MQ=255) cTGTCGGTACTCAAAATGACTTCGCAATGTTCtttt < 1:146804‑M2/36‑5 (MQ=255) cTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTc > 1:3372235/1‑71 (MQ=255) cTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTc > 1:4390736/1‑71 (MQ=255) gTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCa > 1:4676412/1‑71 (MQ=255) tCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCa > 1:387077/1‑43 (MQ=255) tCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCa > 1:2581538/1‑70 (MQ=255) cGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGcgcg > 1:2705919/1‑47 (MQ=255) cGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGcgcg > 1:7846785/1‑47 (MQ=255) cGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGcgcg > 1:1875988/1‑47 (MQ=255) ggTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATAc < 1:2244663/71‑1 (MQ=255) ggTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATAc > 1:7237061/1‑71 (MQ=255) tACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATACgg > 1:407414/1‑71 (MQ=255) tCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCa < 1:5009932/57‑1 (MQ=255) tCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTcc < 1:4516652/62‑1 (MQ=255) cAAAATGACTTCGCAATGTTCttttgagtaccgacagccagtatgtccgccagggtatcacccagtggatc < 1:3649681‑M2/71‑51 (MQ=255) aaaagaacattgcgaagtcattttgagtaccgacagccattatgtccgccagggtatcacccagtggatc > 1:4563286‑M1/1‑4 (MQ=255) aaaagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccaggg > 1:6428214‑M1/1‑4 (MQ=255) aaaagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccaggg > 1:5058715‑M1/1‑4 (MQ=255) aaaagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagg > 1:103402‑M1/1‑4 (MQ=255) aaaagaacattgcgaagtcattttgagtaccgacagccagtatgtcc > 1:1472271‑M1/1‑4 (MQ=255) aaaaTGACTTCGCAATGTTCttttgagtaccgacagccagtatgtccgccagggtatcacccagtggatc > 1:1403228‑M2/1‑20 (MQ=255) aaaaTGACTTCGCAATGTTCttttgagtaccgacagccagtatgtccgccaggg < 1:4589881‑M2/54‑35 (MQ=255) aaaaTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAAc > 1:5482579/1‑57 (MQ=255) aaaaTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAAc > 1:602634/1‑57 (MQ=255) aaaaTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATACGgttgtt > 1:7662891/1‑71 (MQ=255) aaaaTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAG‑AGCCATCAACTCCATACGGttgttg > 1:7517089/1‑71 (MQ=255) aaagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagggtatcacccagtggatcc < 1:3303982‑M1/70‑68 (MQ=255) aagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagggtatcacccagtggatccat < 1:7924866‑M1/71‑70 (MQ=255) aagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagggtatcacccagtggatccat < 1:7931406‑M1/71‑70 (MQ=255) aagaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagggtatcac > 1:6990700‑M1/1‑2 (MQ=255) aTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATa > 1:5785401/1‑42 (MQ=255) aTGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATACGGTTGTtgg > 1:1059473/1‑70 (MQ=255) | CCACGTTTTTTCCAGTTATGGATCCACTGGGTGATACCCTGGCGGACATACTGGCTGTCGGTACTCAAAATGACTTCGCAATGTTCTTTTAACGCCTCCAGCGCGACAATAGCGGCCATCAACTCCATACGGTTGTTGGT > W3110S.gb/235737‑235876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |