| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 752914 | 142 (1.740) | 8 (0.110) | 3/90 | NT | 5.8% | coding (304/567 nt) | ybgD | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | = 752933 | 129 (1.730) | coding (285/567 nt) | ybgD | predicted fimbrial‑like adhesin protein | |||||
Only 100 of 182 total aligned reads displayed.
CCCCAGTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGA > W3110S.gb/752845‑752982 | cccAGTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCg > 1:4063906/1‑70 (MQ=255) ccAGTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGaa < 1:677394/71‑1 (MQ=255) gTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGt < 1:2896747/71‑1 (MQ=255) gTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGt < 1:2786683/71‑1 (MQ=255) ttGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGtt < 1:426209/71‑1 (MQ=255) ttGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGtt < 1:7776861/71‑1 (MQ=255) tGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTa > 1:4001119/1‑71 (MQ=255) cTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAgg < 1:3736973/66‑1 (MQ=255) tCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGc > 1:3409359/1‑70 (MQ=255) cGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGcc > 1:7279608/1‑70 (MQ=255) cGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGcc > 1:1573302/1‑70 (MQ=255) gCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCaa > 1:6679941/1‑71 (MQ=255) tGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACtt > 1:1080481/1‑71 (MQ=255) aCTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTa < 1:1366090/59‑1 (MQ=255) aCTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTAc < 1:7498727/60‑1 (MQ=255) aCTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTg > 1:3577730/1‑70 (MQ=255) cTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGga > 1:3804327‑M2/1‑69 (MQ=255) gtgtTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCcaaagttggcgtaaccttcgata < 1:1070528‑M1/70‑24 (MQ=255) gtgtTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATAc < 1:4464853/71‑1 (MQ=255) ttGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTAc < 1:3210845/53‑1 (MQ=255) ttGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACttt < 1:3992028/62‑1 (MQ=255) tGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCgg > 1:853648/1‑70 (MQ=255) gCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCa > 1:158511/1‑71 (MQ=255) cTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGt > 1:10495/1‑47 (MQ=255) tCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTa < 1:917323/48‑1 (MQ=255) tCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGg > 1:3295184‑M2/1‑59 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGaa > 1:3052947/1‑41 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGaa > 1:6855963/1‑41 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGtt > 1:3497059/1‑45 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTc < 1:2036559/70‑1 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTc < 1:7087871/70‑1 (MQ=255) acaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGt < 1:1239882/43‑1 (MQ=255) caaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGc > 1:5206346/1‑71 (MQ=255) aaaGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGc > 1:946868/1‑70 (MQ=255) aGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTAc > 1:7052048/1‑71 (MQ=255) aGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTAc < 1:3183698/71‑1 (MQ=255) gCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCg > 1:2760547/1‑71 (MQ=255) gCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCg > 1:3624068/1‑71 (MQ=255) cGTAGCACCAGTTGTCTTAGCCGTGCTATCcaaagttggcgtaaccttcg < 1:6609671‑M1/50‑21 (MQ=255) cGTAGCACCAGTTGTCTTAGCCGTGCTATCcaaagttggcgtaacattcg < 1:817083‑M1/50‑21 (MQ=255) cGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACt < 1:7839921/46‑1 (MQ=255) cGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACt < 1:3576538/46‑1 (MQ=255) tAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTg > 1:956172/1‑71 (MQ=255) tAGCACCAGTTGTCTTAGCCGTGATATCcaaagttggcgtaaccttcgat > 1:6340718‑M1/1‑28 (MQ=255) cACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAAc < 1:5152895/40‑1 (MQ=255) cACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCa < 1:1964253/71‑1 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt > 1:3991428/1‑68 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt > 1:6341870/1‑68 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAg < 1:708355/71‑1 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAg < 1:4822156/71‑1 (MQ=255) cAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCaa > 1:7596661/1‑36 (MQ=255) cAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCaa > 1:6610510/1‑36 (MQ=255) cAGATGTCTTAGCCGTGCTATCGAAGGTTACGCaaa > 1:1075202/1‑36 (MQ=38) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACttt > 1:4340041/1‑39 (MQ=255) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACttt > 1:5455632/1‑39 (MQ=255) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACttt > 1:5625431/1‑39 (MQ=255) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTc < 1:490050/53‑1 (MQ=255) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTc < 1:4324107/53‑1 (MQ=255) gTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgc < 1:4740454/71‑1 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACt < 1:2503397/35‑1 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCa > 1:5521431/1‑48 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgca < 1:4445944/71‑1 (MQ=255) gTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5392569/1‑71 (MQ=255) tCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt < 1:7245254/60‑1 (MQ=255) tCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg < 1:453973/70‑1 (MQ=255) cTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5249329/1‑69 (MQ=255) cTTAGCCGAGCTATCGAAGGTTACGCCAACTTTGGATACCGGCAtt > 1:4552859/1‑46 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt < 1:2701837/58‑1 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGaa < 1:4846312/63‑1 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:6667121/1‑68 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcag > 1:6447712/1‑67 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:7429159/69‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggca < 1:6354434/68‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:6096462/1‑66 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:3543876/1‑66 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5353152/1‑66 (MQ=255) gCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgc < 1:1234984/62‑1 (MQ=255) gCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGAt < 1:6180950/70‑1 (MQ=255) gCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGAt < 1:2409782/70‑1 (MQ=255) ccGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:214779/1‑64 (MQ=255) ccGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:7794807/1‑64 (MQ=255) cGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:1444952/1‑70 (MQ=255) cGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACC‑TTGTCa < 1:2279973/54‑1 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATcaca < 1:1753182/71‑1 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:6418731/1‑69 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGAAACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:6744606/1‑69 (MQ=255) tGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAg < 1:1144523/71‑1 (MQ=255) gCTATCGAAGGTTACGCCAACTTTGGATACCGGGATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAg > 1:3203456/1‑70 (MQ=255) gCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGc < 1:5755767/41‑1 (MQ=255) aaccaaagttggcgtaaccttcgatagcacggctaagacaactggtgctacgcctttgtt < 1:4227210‑M1/58‑58 (MQ=255) aTCcaaagttggcgtaaccttcgatagcacggctaagacaactggtgctacgcctttgtt < 1:5343806‑M1/60‑58 (MQ=255) aTCGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgcta > 1:1942146‑M2/1‑22 (MQ=255) aTCGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgcta > 1:6049087‑M2/1‑22 (MQ=255) aTCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGa > 1:5973148/1‑71 (MQ=255) tCcaaagttggcgtaaccttcgatagcacggctaagacaactggtgctacgcctttgttgagcaacacca < 1:6295962‑M1/70‑69 (MQ=255) tCcaaagttggcgtaaccttcgatagcacggctaagacaactggtgctacgcctttg < 1:723863‑M1/57‑56 (MQ=255) tCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:2199792/59‑1 (MQ=255) cGAATGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:817083‑M2/50‑31 (MQ=255) cGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:4673843‑M2/50‑31 (MQ=255) cGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:1274442‑M2/50‑31 (MQ=255) | CCCCAGTTGCTTCGCCTGCACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGA > W3110S.gb/752845‑752982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |