| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 752914 | 142 (1.740) | 8 (0.110) | 3/90 | NT | 5.8% | coding (304/567 nt) | ybgD | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | = 752933 | 129 (1.730) | coding (285/567 nt) | ybgD | predicted fimbrial‑like adhesin protein | |||||
Only 100 of 160 total aligned reads displayed.
CACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTCGACGGC > W3110S.gb/752863‑753001 | cACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTg < 1:7785317/71‑1 (MQ=255) aCTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTg > 1:3577730/1‑70 (MQ=255) tGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGga < 1:6295962‑M2/70‑3 (MQ=255) gtgtTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATAc < 1:4464853/71‑1 (MQ=255) ttGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATAc < 1:2348765/68‑1 (MQ=255) tGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCgg > 1:853648/1‑70 (MQ=255) gCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCa > 1:158511/1‑71 (MQ=255) tCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGg > 1:3295184‑M2/1‑59 (MQ=255) tCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGc < 1:2615212/68‑1 (MQ=255) tCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGc < 1:4354157/68‑1 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGgtt < 1:4227210‑M2/60‑4 (MQ=255) aacaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTcc < 1:1116125/71‑1 (MQ=255) acaaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCg > 1:6222724/1‑71 (MQ=255) caaAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGc > 1:5206346/1‑71 (MQ=255) aaaGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGc > 1:946868/1‑70 (MQ=255) aaGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTa > 1:3896661/1‑71 (MQ=255) aGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTAc > 1:7052048/1‑71 (MQ=255) gCGTAGCACCAGTTGTCTTAGGCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCg > 1:1943146/1‑71 (MQ=255) gCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCg > 1:2117331/1‑71 (MQ=255) gCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCg > 1:2760547/1‑71 (MQ=255) cGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGt < 1:6113833/71‑1 (MQ=255) tAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTg > 1:956172/1‑71 (MQ=255) gCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt > 1:6436125/1‑70 (MQ=255) cACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCa < 1:1964253/71‑1 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt > 1:6341870/1‑68 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt > 1:3991428/1‑68 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAg < 1:708355/71‑1 (MQ=255) aCCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAg < 1:4822156/71‑1 (MQ=255) ccAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGa < 1:4306528/71‑1 (MQ=255) cAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGaa < 1:7248037/71‑1 (MQ=255) aGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTc < 1:490050/53‑1 (MQ=255) gTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGa < 1:1145419/68‑1 (MQ=255) gTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgc < 1:4740454/71‑1 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCa > 1:7917624/1‑48 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCa > 1:5521431/1‑48 (MQ=255) ttGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgca < 1:4445944/71‑1 (MQ=255) gTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5392569/1‑71 (MQ=255) tCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt < 1:6622090/60‑1 (MQ=255) tCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt < 1:7245254/60‑1 (MQ=255) tCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg < 1:453973/70‑1 (MQ=255) cTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5249329/1‑69 (MQ=255) cTTAGCCGAGCTATCGAAGGTTACGCCAACTTTGGATACCGGCAtt > 1:4552859/1‑46 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGt < 1:2701837/58‑1 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:6667121/1‑68 (MQ=255) ttAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcag > 1:6447712/1‑67 (MQ=255) tAGCCGTGCTATCGAAGGTTACGACAACTTTGGATACCGGCATTCCGCTACCg > 1:3513589/1‑53 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:4021185/69‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:3308987/69‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:7531612/69‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggca < 1:6354434/68‑1 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:3543876/1‑66 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:3197754/1‑66 (MQ=255) aGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:5353152/1‑66 (MQ=255) gCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGAt < 1:6180950/70‑1 (MQ=255) ccGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcagg > 1:7794807/1‑64 (MQ=255) cGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCa < 1:4850145/55‑1 (MQ=255) cGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:1444952/1‑70 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATcaca < 1:1753182/71‑1 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATcaca < 1:6739978/71‑1 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATcaca < 1:7137224/71‑1 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:3631261/1‑69 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:7826828/1‑69 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:5875565/1‑69 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:6418731/1‑69 (MQ=255) gTGCTATCGAAGGTTACGCCAACTTTGGAAACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca > 1:6744606/1‑69 (MQ=255) cTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGtt > 1:93028/1‑71 (MQ=255) tATCGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacgcctttgttgagcaacac < 1:1070528‑M2/70‑48 (MQ=255) aTCGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgcta > 1:6049087‑M2/1‑22 (MQ=255) tCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:2199792/59‑1 (MQ=255) cGAATGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:817083‑M2/50‑31 (MQ=255) cGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:4673843‑M2/50‑31 (MQ=255) cGAAGGTTACGCCAACTTTGgatagcacggctaagacaactggtgctacg < 1:1274442‑M2/50‑31 (MQ=255) gAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGa > 1:3135744/1‑58 (MQ=255) gAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATc > 1:1590767/1‑70 (MQ=255) aaGGTTACGCCAACTTTGGATACCGGCATTCCGCTa < 1:3040889/36‑1 (MQ=255) aaGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGAt < 1:5160978/68‑1 (MQ=255) aaGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATc > 1:6911226/1‑69 (MQ=255) aGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAg > 1:5446952/1‑71 (MQ=255) ggTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcag < 1:2348460/50‑1 (MQ=255) ggTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGc > 1:3771634/1‑71 (MQ=255) ggTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGc > 1:174654/1‑71 (MQ=255) gTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCTGATCACAGTTGATCAAGc > 1:5819675/1‑70 (MQ=255) gTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCg < 1:1163091/71‑1 (MQ=255) ttACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggc > 1:1369605/1‑50 (MQ=255) ttACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggc > 1:4868344/1‑50 (MQ=255) tACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCa > 1:2277793/1‑40 (MQ=255) aCGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATca < 1:7822295/54‑1 (MQ=255) aCGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGaa < 1:6601898/70‑1 (MQ=255) gCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:527365/48‑1 (MQ=255) gCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag < 1:5721811/48‑1 (MQ=255) gCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGaa < 1:4763686/68‑1 (MQ=255) gCCAACTTTGGATACCGGCATTCCGCTACCGTTGT‑‑GAAgcaggcag < 1:7519137/46‑1 (MQ=38) cAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAgcaggcag > 1:4972533/1‑46 (MQ=255) cAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGt > 1:7144340/1‑54 (MQ=255) cAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTc > 1:4686566/1‑70 (MQ=255) cAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTCg < 1:717936/71‑1 (MQ=255) aCTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGc > 1:6176840/1‑61 (MQ=255) aCTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTCg < 1:7635965/69‑1 (MQ=255) aCTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTCGAc > 1:1689876/1‑71 (MQ=255) tttGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGaa < 1:6089257/62‑1 (MQ=255) | CACTGGTGTTGCTCAACAAAGGCGTAGCACCAGTTGTCTTAGCCGTGCTATCGAAGGTTACGCCAACTTTGGATACCGGCATTCCGCTACCGTTGTCAGAAGCAGGCAGATCACAGTTGATCAAGCGAATGTCGACGGC > W3110S.gb/752863‑753001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |